Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000482g0080 Nicotiana tabacum HOM05D012341 ORTHO05D014559 5.2e-163 577.8 319 100.0
Nitab4.5_0000482g0130 Nicotiana tabacum HOM05D012341 ORTHO05D014559 3.6e-108 395.6 307 73.6
Nitab4.5_0003449g0020 Nicotiana tabacum HOM05D012341 ORTHO05D014559 1.5e-93 347.1 310 67.7
Nitab4.5_0029075g0010 Nicotiana tabacum HOM05D012341 ORTHO05D014559 1.9e-85 320.1 294 67.0
CAN.G664.8 Capsicum annuum HOM05D012341 ORTHO05D014559 4.2e-72 275.8 331 49.2
Peaxi162Scf00921g00121 Petunia axillaris HOM05D012341 ORTHO05D014559 1.2e-66 257.7 316 49.7
CAN.G1861.4 Capsicum annuum HOM05D012341 ORTHO05D014559 1.7e-60 237.3 310 46.8
Sopen07g024180 Solanum pennellii HOM05D012341 ORTHO05D014559 1.6e-50 204.1 306 40.8
PGSC0003DMG400006144 Solanum tuberosum HOM05D012341 ORTHO05D014559 2.7e-50 203.4 305 43.3
PGSC0003DMG400000671 Solanum tuberosum HOM05D012341 ORTHO05D014559 1.2e-47 194.5 309 41.1
Solyc07g049250.1 Solanum lycopersicum HOM05D012341 ORTHO05D014559 1.5e-45 187.6 309 42.4
Sopen07g025280 Solanum pennellii HOM05D012341 ORTHO05D014559 2.6e-45 186.8 309 38.5
Peaxi162Scf00921g00003 Petunia axillaris HOM05D012341 ORTHO05D014559 2.9e-41 173.3 208 49.5
CAN.G664.6 Capsicum annuum HOM05D012341 ORTHO05D014559 5.6e-40 169.1 308 39.0
Peaxi162Scf00231g00246 Petunia axillaris HOM05D000007 ORTHO05D000017 7.5e-29 132.1 117 56.4
SMO115G0316 Selaginella moellendorffii HOM05D000629 ORTHO05D000576 2.8e-15 87.0 144 33.3
SMO119G0353 Selaginella moellendorffii HOM05D000629 ORTHO05D000576 2.8e-15 87.0 136 33.8
Pp3c8_17710 Physcomitrium patens HOM05D000629 ORTHO05D000576 2.9e-12 77.0 144 30.6
Dinv21339 Davidia involucrata HOM05D000629 ORTHO05D000576 8.4e-12 75.5 316 22.5
Glyma.02G026700 Glycine max HOM05D000629 ORTHO05D000576 1.1e-11 75.1 136 30.9
RcHm_v2.0_Chr2g0169931 Rosa chinensis HOM05D000629 ORTHO05D000576 1.4e-11 74.7 136 28.7
FvH4_6g49790 Fragaria vesca HOM05D000629 ORTHO05D000576 1.9e-11 74.3 136 28.7
FAN05G2798 Fragaria x ananassa HOM05D000629 ORTHO05D000576 1.9e-11 74.3 136 28.7
FAN14G4427 Fragaria x ananassa HOM05D000629 ORTHO05D000576 1.9e-11 74.3 136 28.7
Sabra16G0229600 Salix brachista HOM05D000629 ORTHO05D000576 2.4e-11 73.9 136 28.7
A03p06900 Brassica napus HOM05D000629 ORTHO05D000576 3.2e-11 73.6 136 26.5
BraA03t10012Z Brassica rapa HOM05D000629 ORTHO05D000576 3.2e-11 73.6 136 26.5
FAN09G1195 Fragaria x ananassa HOM05D000629 ORTHO05D000576 3.2e-11 73.6 136 28.7
unitig_746.g26577 Utricularia gibba HOM05D000629 ORTHO05D000576 4.1e-11 73.2 154 28.6
Ca_26197_v3 Cicer arietinum L. HOM05D000629 ORTHO05D000576 5.4e-11 72.8 136 29.4
RcHm_v2.0_Chr2g0169911 Rosa chinensis HOM05D000629 ORTHO05D000576 5.4e-11 72.8 143 32.2
Pp3c24_13770 Physcomitrium patens HOM05D000629 ORTHO05D000576 7.1e-11 72.4 136 30.1
Potri.001G350200 Populus trichocarpa HOM05D000629 ORTHO05D000576 7.1e-11 72.4 136 28.7
vmacro18221 Vaccinium macrocarpon HOM05D000629 ORTHO05D000576 7.1e-11 72.4 138 29.0
Lj2g0011859 Lotus japonicus HOM05D000629 ORTHO05D000576 9.2e-11 72.0 154 27.9
Pp3c24_19330 Physcomitrium patens HOM05D000629 ORTHO05D000576 1.2e-10 71.6 136 29.4
BcaB01g05087 Brassica carinata HOM05D000629 ORTHO05D000576 1.6e-10 71.2 136 26.5
CiPaw.03G032900 Carya illinoinensis HOM05D000629 ORTHO05D000576 1.6e-10 71.2 136 28.7
MBI15_g23242_MAGBIO Magnolia biondii HOM05D000629 ORTHO05D000576 1.6e-10 71.2 136 28.7
TAR629G1864 Trochodendron aralioides HOM05D000629 ORTHO05D000576 1.6e-10 71.2 136 29.4
CSS0037469 Camellia sinensis var. sinensis HOM05D000629 ORTHO05D000576 2.1e-10 70.9 137 29.9
Lsat_1_v5_gn_3_49260 Lactuca sativa HOM05D000629 ORTHO05D000576 2.1e-10 70.9 136 30.1
Nn3g17050 Nelumbo nucifera HOM05D000629 ORTHO05D000576 2.1e-10 70.9 136 29.4
SGA_v2.0_scaffold135G34805 Striga asiatica HOM05D000629 ORTHO05D000084 2.1e-10 70.9 154 27.9
TAR371G0714 Trochodendron aralioides HOM05D000629 ORTHO05D000576 2.1e-10 70.9 136 29.4
Aqoxy3G03153 Aquilegia oxysepala HOM05D000629 ORTHO05D000576 2.7e-10 70.5 136 28.7
Nn4g22953 Nelumbo nucifera HOM05D000629 ORTHO05D000576 2.7e-10 70.5 139 29.5
AUR62039393 Chenopodium quinoa HOM05D000629 ORTHO05D000576 3.5e-10 70.1 136 25.7
AUR62014568 Chenopodium quinoa HOM05D000629 ORTHO05D000576 4.6e-10 69.7 136 25.7
Dinv31135 Davidia involucrata HOM05D000629 ORTHO05D000576 4.6e-10 69.7 136 28.7
Aa31LG4G10840 Aethionema arabicum HOM05D000629 ORTHO05D000576 6.0e-10 69.3 132 31.1
A02p02840 Brassica napus HOM05D000629 ORTHO05D000576 6.0e-10 69.3 136 25.0
Cfa007484 Carpinus fangiana HOM05D000629 ORTHO05D000576 6.0e-10 69.3 136 28.7
Atru.chr8.2428 Acer truncatum HOM05D000629 ORTHO05D000576 7.8e-10 68.9 136 27.2
ATR1101G039 Amborella trichopoda HOM05D000629 ORTHO05D000576 7.8e-10 68.9 136 28.7
AT5G15020 Arabidopsis thaliana HOM05D000629 ORTHO05D000576 7.8e-10 68.9 136 27.9
BraA02t05257Z Brassica rapa HOM05D000629 ORTHO05D000576 7.8e-10 68.9 136 25.0
Cc11_g13980 Coffea canephora HOM05D000629 ORTHO05D000576 7.8e-10 68.9 136 29.4
Haze_14613 Corylus avellana HOM05D000629 ORTHO05D000576 7.8e-10 68.9 136 28.7
ECA234G2364 Erigeron canadensis HOM05D000629 ORTHO05D000576 7.8e-10 68.9 137 29.9
FvH4_6g49780 Fragaria vesca HOM05D000629 ORTHO05D000576 7.8e-10 68.9 142 31.7
CDE04G0561 Ceratophyllum demersum HOM05D000629 ORTHO05D000576 1.0e-09 68.6 136 27.2
Pp3c8_14940 Physcomitrium patens HOM05D000629 ORTHO05D000576 1.0e-09 68.6 136 28.7
PGR142G2915 Punica granatum HOM05D000629 ORTHO05D000576 1.0e-09 68.6 136 27.9
SalBow1G7286 Salvia bowleyana HOM05D000629 ORTHO05D000576 1.0e-09 68.6 136 26.5
Aqoxy3G00865 Aquilegia oxysepala HOM05D000629 ORTHO05D000576 1.3e-09 68.2 136 27.9
CDE06G1214 Ceratophyllum demersum HOM05D000629 ORTHO05D000576 1.3e-09 68.2 136 27.2
Gorai.012G058200 Gossypium raimondii HOM05D000629 ORTHO05D000576 1.3e-09 68.2 136 27.2
GSVIVG01032579001 Vitis vinifera HOM05D000629 ORTHO05D000576 1.3e-09 68.2 136 26.5
MSTRG.3203 Avicennia marina HOM05D000629 ORTHO05D000576 1.7e-09 67.8 154 26.0
BcaC06g31798 Brassica carinata HOM05D000629 ORTHO05D000576 1.7e-09 67.8 136 28.7
Rhsim12G0052100 Rhododendron simsii HOM05D000629 ORTHO05D000576 1.7e-09 67.8 136 28.7
Gohir.A05G362400 Gossypium hirsutum HOM05D000629 ORTHO05D000576 2.3e-09 67.4 138 27.5
Lalb_Chr02g0159881 Lupinus albus HOM05D000629 ORTHO05D000576 2.3e-09 67.4 134 29.1
PSO478G4498 Papaver somniferum HOM05D000629 ORTHO05D000576 2.3e-09 67.4 136 28.7
Carub.0001s2369 Capsella rubella HOM05D000629 ORTHO05D013463 3.0e-09 67.0 159 26.4
Eucgr.I01884 Eucalyptus grandis HOM05D000629 ORTHO05D000576 3.0e-09 67.0 136 27.2
Lalb_Chr02g0159901 Lupinus albus HOM05D000629 ORTHO05D000576 3.0e-09 67.0 134 29.9
PSO161G0028 Papaver somniferum HOM05D000629 ORTHO05D000576 3.0e-09 67.0 136 28.7
TAR622G0385 Trochodendron aralioides HOM05D000629 ORTHO05D000576 3.0e-09 67.0 136 26.5
AL3G10910 Arabidopsis lyrata HOM05D000629 ORTHO05D000576 3.9e-09 66.6 154 26.0
CSS0005583 Camellia sinensis var. sinensis HOM05D000629 ORTHO05D000084 3.9e-09 66.6 136 26.5
CSS0019274 Camellia sinensis var. sinensis HOM05D000629 ORTHO05D000576 3.9e-09 66.6 136 26.5
QL02p079008 Quercus lobata HOM05D000629 ORTHO05D000576 3.9e-09 66.6 136 26.5
Sc11g0008010 Simmondsia chinensis HOM05D000629 ORTHO05D000576 3.9e-09 66.6 136 25.7
THA.LOC104822375 Tarenaya hassleriana HOM05D000629 ORTHO05D000576 3.9e-09 66.6 136 26.5
TPR.G32588 Trifolium pratense HOM05D000629 ORTHO05D000576 5.1e-09 66.2 154 26.6
CSS0002729 Camellia sinensis var. sinensis HOM05D000629 ORTHO05D000576 6.6e-09 65.9 137 29.2
CARHR024590 Cardamine hirsuta HOM05D000629 ORTHO05D000576 6.6e-09 65.9 136 27.2
SGA_v2.0_scaffold205G41733 Striga asiatica HOM05D000629 ORTHO05D000576 6.6e-09 65.9 154 26.6
vmacro01207 Vaccinium macrocarpon HOM05D000629 ORTHO05D000576 6.6e-09 65.9 136 28.7
C02p07460 Brassica napus HOM05D000629 ORTHO05D000576 8.6e-09 65.5 136 24.3
BolC2t06677H Brassica oleracea HOM05D000629 ORTHO05D000576 8.6e-09 65.5 136 24.3
Dinv35005 Davidia involucrata HOM05D000629 ORTHO05D000576 8.6e-09 65.5 136 26.5
Lj2g0021309 Lotus japonicus HOM05D000629 ORTHO05D000576 8.6e-09 65.5 154 26.0
Lalb_Chr02g0159891 Lupinus albus HOM05D000629 ORTHO05D000576 8.6e-09 65.5 134 28.4
Sed0025971 Sechium edule HOM05D000629 ORTHO05D000576 8.6e-09 65.5 136 27.2
AL1G38020 Arabidopsis lyrata HOM05D000629 ORTHO05D000576 1.1e-08 65.1 136 27.2
Medtr6g008995 Medicago truncatula HOM05D000629 ORTHO05D000576 1.1e-08 65.1 154 26.0
Oeu060596.1 Olea europaea HOM05D000629 ORTHO05D000576 1.1e-08 65.1 136 27.9
Psat1g078160 Pisum sativum HOM05D000629 ORTHO05D000576 1.1e-08 65.1 154 26.0
vmacro05781 Vaccinium macrocarpon HOM05D000629 ORTHO05D000576 1.1e-08 65.1 154 26.0
Aa31LG4G10830 Aethionema arabicum HOM05D000629 ORTHO05D000576 1.5e-08 64.7 132 28.8
BolC1t05951H Brassica oleracea HOM05D000629 ORTHO05D000576 1.5e-08 64.7 154 26.0
Carub.0001s2368 Capsella rubella HOM05D000629 ORTHO05D000576 1.5e-08 64.7 136 27.2
BcaB04g20237 Brassica carinata HOM05D000629 ORTHO05D000576 1.9e-08 64.3 154 26.6
BcaC09g47650 Brassica carinata HOM05D000629 ORTHO05D000576 1.9e-08 64.3 154 26.0
RhsimUnG0169000 Rhododendron simsii HOM05D000629 ORTHO05D000576 1.9e-08 64.3 154 25.3
Sc11g0008020 Simmondsia chinensis HOM05D000629 ORTHO05D000576 1.9e-08 64.3 154 27.9
AT1G24190 Arabidopsis thaliana HOM05D000629 ORTHO05D000576 2.5e-08 63.9 136 26.5
Nitab4.5_0001030g0110 Nicotiana tabacum HOM05D000629 ORTHO05D000576 2.5e-08 63.9 154 26.0
QL02p079019 Quercus lobata HOM05D000629 ORTHO05D000576 2.5e-08 63.9 132 28.0
Zm00001eb334400 Zea mays HOM05D000629 ORTHO05D000576 2.5e-08 63.9 136 27.9
QL02p079084 Quercus lobata HOM05D000629 ORTHO05D000576 3.3e-08 63.5 136 26.5
VMungo0251G0760 Vigna mungo HOM05D000629 ORTHO05D000576 3.3e-08 63.5 145 24.1
CARHR075690 Cardamine hirsuta HOM05D000629 ORTHO05D000576 4.3e-08 63.2 154 25.3
unitig_744.g24345 Utricularia gibba HOM05D000629 ORTHO05D000576 4.3e-08 63.2 154 26.0
Carub.0003s0081 Capsella rubella HOM05D000629 ORTHO05D000576 5.6e-08 62.8 154 24.7
Sp5g25130 Schrenkiella parvula HOM05D000629 ORTHO05D000576 5.6e-08 62.8 143 30.1
Sp3g00760 Schrenkiella parvula HOM05D000629 ORTHO05D000576 9.6e-08 62.0 136 25.7
AT3G01320 Arabidopsis thaliana HOM05D000629 ORTHO05D000576 1.6e-07 61.2 154 24.7
HanXRQChr17g0570321 Helianthus annuus HOM05D000629 ORTHO05D000576 1.6e-07 61.2 251 19.1
Oeu062378.1 Olea europaea HOM05D000629 ORTHO05D000576 1.6e-07 61.2 136 25.7
Sp5g25140 Schrenkiella parvula HOM05D000629 ORTHO05D000576 2.1e-07 60.8 133 29.3
EL10Ac2g04646 Beta vulgaris HOM05D000629 ORTHO05D000576 2.8e-07 60.5 162 23.5
BNapus_Darmor_BZH_scaffold_119p00100 Brassica napus HOM05D000629 ORTHO05D000576 2.8e-07 60.5 136 26.5
BNapus_Darmor_BZH_scaffold_97p00340 Brassica napus HOM05D000629 ORTHO05D000576 2.8e-07 60.5 136 26.5
Thhalv10019899m.g Eutrema salsugineum HOM05D000629 ORTHO05D000576 2.8e-07 60.5 154 24.7
Gorai.006G027200 Gossypium raimondii HOM05D000629 ORTHO05D000576 2.8e-07 60.5 132 24.2
HanXRQChr15g0476041 Helianthus annuus HOM05D000629 ORTHO05D000576 2.8e-07 60.5 134 26.1
Lj7C406G4 Lonicera japonica HOM05D000629 ORTHO05D000576 2.8e-07 60.5 136 25.7
BraA01t04659Z Brassica rapa HOM05D000629 ORTHO05D000576 4.7e-07 59.7 136 26.5
Dinv13124 Davidia involucrata HOM05D000629 ORTHO05D000576 4.7e-07 59.7 136 26.5
QL02p079032 Quercus lobata HOM05D000629 ORTHO05D000576 4.7e-07 59.7 154 24.7
Os01g0109700 Oryza sativa ssp. japonica HOM05D000629 ORTHO05D000576 6.2e-07 59.3 130 27.7
BNapus_Darmor_BZH_scaffold_133p00100 Brassica napus HOM05D000629 ORTHO05D000576 8.1e-07 58.9 136 26.5
Lalb_Chr05g0230101 Lupinus albus HOM05D000629 ORTHO05D000576 1.4e-06 58.2 158 26.6
Phvul.003G056500 Phaseolus vulgaris HOM05D000629 ORTHO05D000576 1.4e-06 58.2 118 24.6
TWI36G1084 Tripterygium wilfordii HOM05D000629 ORTHO05D000576 1.4e-06 58.2 136 23.5
C03p07890 Brassica napus HOM05D000629 ORTHO05D000576 3.1e-06 57.0 105 25.7
BolC3t13287H Brassica oleracea HOM05D000629 ORTHO05D000576 3.1e-06 57.0 105 25.7
QL02p079058 Quercus lobata HOM05D000629 ORTHO05D000576 3.1e-06 57.0 136 24.3
TWI12G1163 Tripterygium wilfordii HOM05D000629 ORTHO05D000576 3.1e-06 57.0 136 24.3
TWI53G0540 Tripterygium wilfordii HOM05D000629 ORTHO05D000576 4.0e-06 56.6 157 26.1
BcaC08g44274 Brassica carinata HOM05D000629 ORTHO05D000576 5.2e-06 56.2 136 26.5
C06p16950 Brassica napus HOM05D000629 ORTHO05D000576 8.9e-06 55.5 136 26.5
BolC6t36894H Brassica oleracea HOM05D000629 ORTHO05D000576 8.9e-06 55.5 136 26.5
Lalb_Chr05g0230121 Lupinus albus HOM05D000629 ORTHO05D000576 8.9e-06 55.5 131 26.0
SHI22238 Sapria himalayana HOM05D000629 ORTHO05D000576 8.9e-06 55.5 136 24.3


User provided reference genes

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