Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000406g0150 Nicotiana tabacum HOM05D011191 ORTHO05D010786 1.9e-167 592.4 302 100.0
Nitab4.5_0012106g0010 Nicotiana tabacum HOM05D011191 ORTHO05D010786 3.2e-114 415.6 302 75.5
PGSC0003DMG400014768 Solanum tuberosum HOM05D011191 ORTHO05D010786 2.0e-71 273.5 205 74.6
Sopen08g022570 Solanum pennellii HOM05D011191 ORTHO05D010786 4.6e-68 262.3 204 72.5
Peaxi162Scf01419g00119 Petunia axillaris HOM05D011191 ORTHO05D010786 1.3e-67 260.8 205 70.7
Solyc08g068840.3 Solanum lycopersicum HOM05D011191 ORTHO05D010786 7.3e-66 255.0 204 71.6
CAN.G273.25 Capsicum annuum HOM05D011191 ORTHO05D010786 1.8e-64 250.4 209 68.4
Peaxi162Scf00850g00110 Petunia axillaris HOM05D011191 ORTHO05D010786 7.4e-34 148.7 124 68.5
Oeu064523.1 Olea europaea HOM05D011191 ORTHO05D010786 2.3e-19 100.5 192 40.1
MSTRG.11791 Avicennia marina HOM05D011191 ORTHO05D010786 2.8e-17 93.6 173 38.7
FvH4_3g11660 Fragaria vesca HOM05D014033 ORTHO05D010786 4.1e-16 89.7 204 38.2
SGA_v2.0_scaffold27G11628 Striga asiatica HOM05D011191 ORTHO05D010786 6.9e-16 89.0 162 39.5
FAN16G2119 Fragaria x ananassa HOM05D014033 ORTHO05D010786 3.4e-15 86.7 186 39.2
FAN21G1527 Fragaria x ananassa HOM05D014033 ORTHO05D010786 5.9e-15 85.9 188 38.8
Cc08_g06710 Coffea canephora HOM05D011191 ORTHO05D010786 1.9e-13 80.9 92 50.0
Migut.A00390 Erythranthe guttata HOM05D011191 ORTHO05D010786 1.9e-13 80.9 176 40.3
RcHm_v2.0_Chr5g0018721 Rosa chinensis HOM05D014033 ORTHO05D010786 4.2e-13 79.7 189 38.1
Potri.001G082800 Populus trichocarpa HOM05D011191 ORTHO05D010786 7.2e-13 79.0 146 38.4
Thecc.06G134400 Theobroma cacao HOM05D021816 ORTHO05D010786 1.8e-11 74.3 174 35.6
Hund20999 Selenicereus undatus HOM05D022334 ORTHO05D019466 1.5e-10 71.2 178 35.4
SalBow4G0292 Salvia bowleyana HOM05D011191 ORTHO05D010786 4.3e-10 69.7 170 36.5
Carub.0007s2165 Capsella rubella HOM05D010419 ORTHO05D012558 3.7e-09 66.6 172 39.0
Gohir.A06G141400 Gossypium hirsutum HOM05D021816 ORTHO05D010786 3.7e-09 66.6 171 35.1
Duzib128G1433 Durio zibethinus HOM05D002702 ORTHO05D003416 4.8e-09 66.2 156 34.6
Gohir.D11G170800 Gossypium hirsutum HOM05D002702 ORTHO05D003416 8.2e-09 65.5 207 32.4
Gorai.007G182800 Gossypium raimondii HOM05D002702 ORTHO05D003416 8.2e-09 65.5 207 32.4
Sed0020965 Sechium edule HOM05D002702 ORTHO05D010786 8.2e-09 65.5 202 33.2
Atru.chr2.1532 Acer truncatum HOM05D002702 ORTHO05D003416 1.4e-08 64.7 46 60.9
Nitab4.5_0002341g0020 Nicotiana tabacum HOM05D002702 ORTHO05D003416 1.4e-08 64.7 159 34.0
CAN.G756.30 Capsicum annuum HOM05D002702 ORTHO05D003416 1.8e-08 64.3 199 31.7
Duzib192G0687 Durio zibethinus HOM05D021816 ORTHO05D010786 2.4e-08 63.9 166 32.5
Nitab4.5_0000563g0080 Nicotiana tabacum HOM05D002702 ORTHO05D003416 2.4e-08 63.9 167 35.9
GSVIVG01029946001 Vitis vinifera HOM05D002702 ORTHO05D003416 2.4e-08 63.9 222 31.5
Lj4g0005434 Lotus japonicus HOM05D002702 ORTHO05D003416 3.1e-08 63.5 204 30.9
Zm00001eb294470 Zea mays HOM05D002702 ORTHO05D003416 3.1e-08 63.5 162 36.4
Dinv17311 Davidia involucrata HOM05D002702 ORTHO05D003416 9.0e-08 62.0 179 33.0
Dinv25037 Davidia involucrata HOM05D002702 ORTHO05D003416 9.0e-08 62.0 158 36.1
PSO210G0347 Papaver somniferum HOM05D002702 ORTHO05D003416 1.2e-07 61.6 225 31.1
Ciclev10019321m.g Citrus clementina HOM05D002702 ORTHO05D003416 1.5e-07 61.2 266 31.2
CsaV3_1G039340 Cucumis sativus L. HOM05D002702 ORTHO05D003416 1.5e-07 61.2 141 35.5
Cc02_g13440 Coffea canephora HOM05D002702 ORTHO05D003416 2.0e-07 60.8 140 36.4
Gohir.A11G164500 Gossypium hirsutum HOM05D002702 ORTHO05D003416 2.0e-07 60.8 207 32.4
Haze_20120 Corylus avellana HOM05D002702 ORTHO05D003416 4.5e-07 59.7 176 32.4
Lj2g0010098 Lotus japonicus HOM05D002702 ORTHO05D003416 5.9e-07 59.3 215 29.8
Manes.08G152300 Manihot esculenta HOM05D002702 ORTHO05D003416 5.9e-07 59.3 226 31.0
PSO170G0409 Papaver somniferum HOM05D002702 ORTHO05D003416 5.9e-07 59.3 194 29.9
CDE10G0041 Ceratophyllum demersum HOM05D002702 ORTHO05D003416 7.7e-07 58.9 157 32.5
Lalb_Chr02g0157421 Lupinus albus HOM05D002702 ORTHO05D003416 7.7e-07 58.9 163 31.3
Sp7g18130 Schrenkiella parvula HOM05D010419 ORTHO05D012558 7.7e-07 58.9 174 36.8
COL.COLO4_30908 Corchorus olitorius HOM05D021816 ORTHO05D010786 1.0e-06 58.5 188 30.3
FAN27G3449 Fragaria x ananassa HOM05D024095 ORTHO05D010786 1.3e-06 58.2 179 32.4
PSO832G1528 Papaver somniferum HOM05D002702 ORTHO05D003416 1.3e-06 58.2 191 33.5
CiPaw.15G041500 Carya illinoinensis HOM05D002702 ORTHO05D003416 1.7e-06 57.8 210 30.0
Sc25g0001160 Simmondsia chinensis HOM05D002702 ORTHO05D003416 1.7e-06 57.8 38 65.8
Aqoxy5G01199 Aquilegia oxysepala HOM05D002702 ORTHO05D003416 2.2e-06 57.4 203 30.0
CARHR226350 Cardamine hirsuta HOM05D010419 ORTHO05D012558 2.2e-06 57.4 165 34.5
MELO3C032627.2 Cucumis melo HOM05D002702 ORTHO05D010786 2.2e-06 57.4 187 27.8
CsaV3_4G028190 Cucumis sativus L. HOM05D002702 ORTHO05D010786 2.2e-06 57.4 211 29.4
Gorai.013G196300 Gossypium raimondii HOM05D002702 ORTHO05D003416 2.2e-06 57.4 185 30.8
ClCG03G016660 Citrullus lanatus HOM05D002702 ORTHO05D003416 2.9e-06 57.0 210 30.5
Manes.17G005100 Manihot esculenta HOM05D011191 ORTHO05D010786 2.9e-06 57.0 146 32.9
Aqoxy4G00023 Aquilegia oxysepala HOM05D002702 ORTHO05D003416 3.8e-06 56.6 203 29.6
CiPaw.08G118400 Carya illinoinensis HOM05D002702 ORTHO05D003416 3.8e-06 56.6 209 29.7
Sc13g0009820 Simmondsia chinensis HOM05D002702 ORTHO05D019466 3.8e-06 56.6 198 30.8
THA.LOC104812896 Tarenaya hassleriana HOM05D010419 ORTHO05D012558 3.8e-06 56.6 184 33.7
Aa31LG3G1860 Aethionema arabicum HOM05D002702 ORTHO05D003416 5.0e-06 56.2 44 54.5
Gohir.D13G166200 Gossypium hirsutum HOM05D002702 ORTHO05D003416 5.0e-06 56.2 194 30.4
Os05g0305100 Oryza sativa ssp. japonica HOM05D002702 ORTHO05D003416 5.0e-06 56.2 192 28.1
PGR031G3358 Punica granatum HOM05D002702 ORTHO05D003416 5.0e-06 56.2 209 31.1
Solyc01g088720.3 Solanum lycopersicum HOM05D002702 ORTHO05D003416 5.0e-06 56.2 205 30.2
Sopen01g035560 Solanum pennellii HOM05D002702 ORTHO05D003416 5.0e-06 56.2 213 31.0
TWI60G0137 Tripterygium wilfordii HOM05D002702 ORTHO05D003416 5.0e-06 56.2 220 28.6
Gohir.D06G146200 Gossypium hirsutum HOM05D021816 ORTHO05D010786 6.5e-06 55.8 164 30.5
Sed0008593 Sechium edule HOM05D002702 ORTHO05D003416 6.5e-06 55.8 141 35.5
Actinidia07964 Actinidia chinensis HOM05D002702 ORTHO05D003416 8.5e-06 55.5 246 27.2
Aa31LG6G2140 Aethionema arabicum HOM05D010419 ORTHO05D012558 8.5e-06 55.5 170 32.9
CSS0046413 Camellia sinensis var. sinensis HOM05D049805 ORTHO05D043320 8.5e-06 55.5 44 59.1
Ca_08321_v3 Cicer arietinum L. HOM05D002702 ORTHO05D003416 8.5e-06 55.5 228 29.4
PGR042G0279 Punica granatum HOM05D002702 ORTHO05D003416 8.5e-06 55.5 189 28.6


User provided reference genes

Program Settings