Gene: Os05g0305100
General Information
Structural Information
- Species Oryza sativa ssp. japonica
- Gene Identifier Os05g0305100
- Transcript Identifier Os05t0305100-01
- Gene Type Coding gene
- Location chr05 : 13772931-13781639 : positive
Gene Family Information
- ID HOM05D002702
- #Genes/#Species 254/99
- Phylogenetic origin
- ID ORTHO05D003416
- #Genes/#Species 225/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Os05t0305100-01
- MSU-ID LOC_Os05g23940.1
- uniprot Q0DJB2
Descriptions
- Description Similar to Transcription factor IIIB 90 kDa subunit (TFIIIB90) (hTFIIIB90) (B- related factor 1) (BRF-1) (hBRF) (TATA box-binding protein-associated factor, RNA polymerase III, subunit 2) (TAF3B2). Splice isoform 2.
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0070897 | IEA | GOA Database | transcription preinitiation complex assembly | |
| GO:0070897 | IEA | InterPro | transcription preinitiation complex assembly | |
| GO:0006352 | IBA IEA | GOA Database | DNA-templated transcription, initiation | |
| GO:0006352 | IEA | InterPro | DNA-templated transcription, initiation | |
| GO:0006383 | IBA | GOA Database | transcription by RNA polymerase III | |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT2G01280 |
| GO:0055046 | ISO | PLAZA Integrative Orthology | microgametogenesis | AT3G09360 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0017025 | IEA | GOA Database | TBP-class protein binding | |
| GO:0017025 | IEA | InterPro | TBP-class protein binding | |
| GO:0001006 | IBA | GOA Database | RNA polymerase III type 3 promoter sequence-specific DNA binding | |
| GO:0000995 | IBA | GOA Database | RNA polymerase III general transcription initiation factor activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000126 | IBA | GOA Database | transcription factor TFIIIB complex | |
| GO:0005634 | IBA | GOA Database | nucleus | |
| GO:0097550 | IBA | GOA Database | transcription preinitiation complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.4.3.1 | RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIb transcription factor complex.component BRF1 |