Gene: Solyc01g088720.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g088720.3
  • Transcript Identifier Solyc01g088720.3.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 75726146-75744298 : positive

Gene Family Information

  • ID HOM05D002702
  • #Genes/#Species 254/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g088720.3.1
  • uniprot A0A3Q7EJK6
  • gene_id Solyc01g088720

Descriptions

  • Description Transcription factor IIIB 90 kDa subunit (AHRD V3.3 *** A0A2G2XT56_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006383
IBA
IEA
GOA Databasetranscription by RNA polymerase III
GO:0006383
IEA
InterProtranscription by RNA polymerase III
GO:0055046
ISO
PLAZA Integrative Orthologymicrogametogenesis AT3G09360
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT2G01280
GO:0006352
IBA
IEA
GOA DatabaseDNA-templated transcription, initiation
GO:0006352
IEA
InterProDNA-templated transcription, initiation
GO:0070897
IEA
GOA Databasetranscription preinitiation complex assembly
GO:0070897
IEA
InterProtranscription preinitiation complex assembly

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000995
IBA
IEA
GOA DatabaseRNA polymerase III general transcription initiation factor activity
GO:0000995
IEA
InterProRNA polymerase III general transcription initiation factor activity
GO:0001006
IBA
GOA DatabaseRNA polymerase III type 3 promoter sequence-specific DNA binding
GO:0017025
IEA
GOA DatabaseTBP-class protein binding
GO:0017025
IEA
InterProTBP-class protein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0097550
IBA
GOA Databasetranscription preinitiation complex
GO:0005634
IBA
GOA Databasenucleus
GO:0000126
IBA
IEA
GOA Databasetranscription factor TFIIIB complex
GO:0000126
IEA
InterProtranscription factor TFIIIB complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036915 Cyclin-like superfamily
IPR011665 Brf1, TBP-binding domain
IPR000812 Transcription factor TFIIB
IPR013150 Transcription factor TFIIB, cyclin-like domain
IPR029529 Transcription factor IIIB subunit Brf1
IPR013763 Cyclin-like
Mapman id Description
15.4.3.1 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIb transcription factor complex.component BRF1