Gene: Sopen01g035560

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g035560
  • Transcript Identifier Sopen01g035560.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 93621533-93639941 : positive

Gene Family Information

  • ID HOM05D002702
  • #Genes/#Species 254/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g035560.1

Descriptions

  • Description Cyclin/Brf1-like TBP-binding protein | FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription regulator activity, transcription activator activity, zinc ion binding, translation initiation factor activity | INVOLVED IN: translational initiation, positive regulation of transcription, regulation of transcription, DNA-dependent, transcription initiation | LOCATED IN: nucleus | EXPRESSED IN: 16 plant structures | EXPRESSED DURING: 9 growth stages | CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related , Cyclin-like , Transcription factor TFIIB, cyclin-related , Cyclin-related , Brf1-like TBP-binding , Cyclin | BEST Arabidopsis thaliana protein match is: Cyclin/Brf1-like TBP-binding protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006383
IEA
InterProtranscription by RNA polymerase III
GO:0006352
IEA
InterProDNA-templated transcription, initiation
GO:0070897
IEA
InterProtranscription preinitiation complex assembly
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT2G01280
GO:0055046
ISO
PLAZA Integrative Orthologymicrogametogenesis AT3G09360

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000995
IEA
InterProRNA polymerase III general transcription initiation factor activity
GO:0017025
IEA
InterProTBP-class protein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000126
IEA
InterProtranscription factor TFIIIB complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036915 Cyclin-like superfamily
IPR011665 Brf1, TBP-binding domain
IPR029529 Transcription factor IIIB subunit Brf1
IPR013150 Transcription factor TFIIB, cyclin-like domain
IPR013763 Cyclin-like
IPR000812 Transcription factor TFIIB
Mapman id Description
15.4.3.1 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIb transcription factor complex.component BRF1