Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000257g0240 Nicotiana tabacum HOM05D006873 ORTHO05D008668 5.3e-208 727.6 421 100.0
Nitab4.5_0009368g0020 Nicotiana tabacum HOM05D006873 ORTHO05D008668 1.4e-195 686.4 424 92.9
PGSC0003DMG400015575 Solanum tuberosum HOM05D006873 ORTHO05D008668 6.6e-150 534.6 416 74.8
Peaxi162Scf00421g00062 Petunia axillaris HOM05D006873 ORTHO05D008668 8.7e-142 507.7 421 73.4
Solyc05g006070.4 Solanum lycopersicum HOM05D006873 ORTHO05D008668 3.7e-140 502.3 414 73.7
Sopen05g002090 Solanum pennellii HOM05D006873 ORTHO05D008668 3.1e-139 499.2 415 73.5
CSS0006883 Camellia sinensis var. sinensis HOM05D006873 ORTHO05D008668 7.2e-80 302.0 421 50.6
CSS0023446 Camellia sinensis var. sinensis HOM05D006873 ORTHO05D008668 2.8e-79 300.1 424 50.0
Actinidia15007 Actinidia chinensis HOM05D006873 ORTHO05D008668 6.8e-78 295.4 417 50.6
MSTRG.7876 Avicennia marina HOM05D006873 ORTHO05D008668 1.5e-77 294.3 428 45.1
SalBow2G2439 Salvia bowleyana HOM05D006873 ORTHO05D008668 2.9e-73 280.0 426 42.5
SalBow2G2215 Salvia bowleyana HOM05D006873 ORTHO05D008668 1.1e-72 278.1 426 42.3
DCAR_026551 Daucus carota HOM05D006873 ORTHO05D008668 9.8e-69 265.0 425 45.6
CiPaw.06G074700 Carya illinoinensis HOM05D006873 ORTHO05D008668 3.2e-67 260.0 440 41.6
Atru.chr11.1966 Acer truncatum HOM05D006873 ORTHO05D008668 1.6e-66 257.7 319 47.0
Cpa.g.sc5.353 Carica papaya HOM05D006873 ORTHO05D008668 3.9e-65 253.1 384 44.0
Nn3g16974 Nelumbo nucifera HOM05D006873 ORTHO05D008668 5.0e-65 252.7 367 42.2
Manes.05G090700 Manihot esculenta HOM05D006873 ORTHO05D008668 3.3e-64 250.0 376 44.7
SGA_v2.0_scaffold166G38344 Striga asiatica HOM05D006873 ORTHO05D008668 8.0e-63 245.4 446 40.1
Migut.L01442 Erythranthe guttata HOM05D006873 ORTHO05D008668 3.1e-62 243.4 493 41.6
Ciclev10031560m.g Citrus clementina HOM05D006873 ORTHO05D008668 8.9e-62 241.9 314 45.2
Haze_12141 Corylus avellana HOM05D006873 ORTHO05D008668 2.0e-61 240.7 405 45.2
Cc11_g14280 Coffea canephora HOM05D006873 ORTHO05D008668 2.6e-61 240.4 310 50.0
Thecc.02G242900 Theobroma cacao HOM05D006873 ORTHO05D008668 2.2e-60 237.3 349 44.1
Cfa009104 Carpinus fangiana HOM05D006873 ORTHO05D008668 4.9e-60 236.1 336 46.1
Potri.008G146700 Populus trichocarpa HOM05D006873 ORTHO05D008668 2.4e-59 233.8 338 45.9
PGR119G2095 Punica granatum HOM05D006873 ORTHO05D008668 2.1e-58 230.7 386 40.4
Phvul.002G074900 Phaseolus vulgaris HOM05D006873 ORTHO05D008668 3.0e-57 226.9 330 43.3
Glyma.02G030100 Glycine max HOM05D006873 ORTHO05D008668 1.6e-55 221.1 332 43.4
Lj2g0015184 Lotus japonicus HOM05D006873 ORTHO05D008668 2.1e-55 220.7 319 42.9
Glyma.01G035700 Glycine max HOM05D006873 ORTHO05D008668 3.6e-55 219.9 332 43.1
VMungo1215G0960 Vigna mungo HOM05D006873 ORTHO05D008668 6.2e-55 219.2 332 41.3
CANSAT01G2194 Cannabis sativa HOM05D006873 ORTHO05D008668 8.1e-55 218.8 414 39.1
TPR.G13500 Trifolium pratense HOM05D006873 ORTHO05D008668 1.4e-54 218.0 315 41.9
COL.COLO4_37899 Corchorus olitorius HOM05D006873 ORTHO05D008668 1.8e-54 217.6 289 46.4
unitig_26.g10334 Utricularia gibba HOM05D006873 ORTHO05D008668 1.8e-54 217.6 318 45.3
vmacro16278 Vaccinium macrocarpon HOM05D006873 ORTHO05D008668 2.3e-54 217.2 384 39.8
Lsat_1_v5_gn_8_160241 Lactuca sativa HOM05D006873 ORTHO05D008668 1.2e-53 214.9 410 41.0
EL10Ac6g13256 Beta vulgaris HOM05D006873 ORTHO05D008668 2.6e-53 213.8 439 44.2
HanXRQChr08g0209031 Helianthus annuus HOM05D006873 ORTHO05D008668 2.6e-53 213.8 307 43.3
Duzib248G0774 Durio zibethinus HOM05D006873 ORTHO05D008668 4.4e-53 213.0 358 40.8
Sabra08G0111700 Salix brachista HOM05D006873 ORTHO05D008668 7.5e-53 212.2 331 45.9
THA.LOC104823082 Tarenaya hassleriana HOM05D006873 ORTHO05D008668 1.3e-52 211.5 408 37.3
Dinv31000 Davidia involucrata HOM05D006873 ORTHO05D008668 1.7e-52 211.1 313 47.0
Dinv31103 Davidia involucrata HOM05D006873 ORTHO05D008668 1.7e-52 211.1 313 47.0
ECA234G0329 Erigeron canadensis HOM05D000967 ORTHO05D000796 2.2e-52 210.7 321 42.7
Lalb_Chr05g0217211 Lupinus albus HOM05D006873 ORTHO05D008668 4.9e-52 209.5 334 37.1
Sc11g0001350 Simmondsia chinensis HOM05D006873 ORTHO05D008668 8.3e-52 208.8 374 45.2
Medtr5g035330 Medicago truncatula HOM05D006873 ORTHO05D008668 1.1e-51 208.4 316 40.8
Eucgr.B02558 Eucalyptus grandis HOM05D006873 ORTHO05D008668 5.4e-51 206.1 338 39.9
Ca_04627_v3 Cicer arietinum L. HOM05D006873 ORTHO05D008668 7.1e-51 205.7 313 42.2
Rhsim12G0124200 Rhododendron simsii HOM05D006873 ORTHO05D008668 9.2e-51 205.3 382 39.8
Hund25317 Selenicereus undatus HOM05D006873 ORTHO05D008668 1.6e-50 204.5 319 39.5
GSVIVG01020168001 Vitis vinifera HOM05D006873 ORTHO05D008668 1.6e-50 204.5 260 43.5
CDE07G1306 Ceratophyllum demersum HOM05D005206 ORTHO05D006219 4.6e-50 203.0 321 40.2
QL03p062447 Quercus lobata HOM05D006873 ORTHO05D008668 1.0e-49 201.8 235 48.5
TWI18G0196 Tripterygium wilfordii HOM05D006873 ORTHO05D008668 1.0e-49 201.8 395 36.2
Gohir.A08G123000 Gossypium hirsutum HOM05D006873 ORTHO05D008668 2.3e-49 200.7 375 39.5
Aqoxy3G03077 Aquilegia oxysepala HOM05D006873 ORTHO05D008668 5.1e-49 199.5 457 37.2
Gohir.D08G144400 Gossypium hirsutum HOM05D006873 ORTHO05D008668 5.1e-49 199.5 219 50.7
Gorai.004G149100 Gossypium raimondii HOM05D006873 ORTHO05D008668 5.1e-49 199.5 219 50.7
arahy.Tifrunner.gnm1.ann1.MXA56B Arachis hypogaea HOM05D006873 ORTHO05D008668 8.6e-49 198.7 389 36.8
PSO063G4822 Papaver somniferum HOM05D006873 ORTHO05D008668 8.6e-49 198.7 415 34.9
PSO832G2329 Papaver somniferum HOM05D006873 ORTHO05D008668 8.6e-49 198.7 415 35.2
MELO3C002912.2 Cucumis melo HOM05D006873 ORTHO05D008668 1.9e-48 197.6 329 38.9
Aa31LG4G10700 Aethionema arabicum HOM05D006873 ORTHO05D008668 2.5e-48 197.2 431 33.2
TAR622G0254 Trochodendron aralioides HOM05D006873 ORTHO05D008668 2.5e-48 197.2 315 40.6
CARHR063320 Cardamine hirsuta HOM05D006873 ORTHO05D008668 3.3e-48 196.8 479 34.2
Thhalv10018395m.g Eutrema salsugineum HOM05D006873 ORTHO05D008668 5.6e-48 196.1 393 39.2
Carub.0002s1690 Capsella rubella HOM05D006873 ORTHO05D008668 9.5e-48 195.3 418 34.4
ClCG09G020710 Citrullus lanatus HOM05D006873 ORTHO05D008668 2.8e-47 193.7 332 38.0
AUR62020959 Chenopodium quinoa HOM05D006873 ORTHO05D008668 3.6e-47 193.4 319 44.2
arahy.Tifrunner.gnm1.ann1.8WMT1Z Arachis hypogaea HOM05D006873 ORTHO05D008668 8.1e-47 192.2 259 44.4
Prupe.1G259500 Prunus persica HOM05D006873 ORTHO05D008668 2.4e-46 190.7 468 31.8
AL2G29500 Arabidopsis lyrata HOM05D006873 ORTHO05D008668 5.2e-46 189.5 426 34.0
Oeu001659.1 Olea europaea HOM05D006873 ORTHO05D008668 5.2e-46 189.5 247 48.2
Sed0022830 Sechium edule HOM05D006873 ORTHO05D008668 6.8e-46 189.1 332 38.6
AT1G70200 Arabidopsis thaliana HOM05D006873 ORTHO05D008668 8.9e-46 188.7 511 33.1
MD16G1087500 Malus domestica HOM05D006873 ORTHO05D008668 4.4e-45 186.4 410 34.6
Sp5g25330 Schrenkiella parvula HOM05D006873 ORTHO05D008668 4.4e-45 186.4 403 35.0
arahy.Tifrunner.gnm1.ann1.RPT3RX Arachis hypogaea HOM05D006873 ORTHO05D009096 5.8e-45 186.0 261 42.9
BcaC08g45836 Brassica carinata HOM05D006873 ORTHO05D008668 1.3e-44 184.9 167 52.1
BraA07t30751Z Brassica rapa HOM05D006873 ORTHO05D008668 2.2e-44 184.1 394 35.3
A07p31180 Brassica napus HOM05D006873 ORTHO05D008668 2.9e-44 183.7 394 36.0
arahy.Tifrunner.gnm1.ann1.N2BTYN Arachis hypogaea HOM05D006873 ORTHO05D008668 6.4e-44 182.6 423 34.8
BcaB03g15534 Brassica carinata HOM05D006873 ORTHO05D008668 6.4e-44 182.6 168 51.8
C06p36230 Brassica napus HOM05D006873 ORTHO05D008668 6.4e-44 182.6 166 51.8
BolC6t38744H Brassica oleracea HOM05D006873 ORTHO05D008668 6.4e-44 182.6 166 51.2
FvH4_4g34980 Fragaria vesca HOM05D006873 ORTHO05D008668 3.5e-42 176.8 242 40.1
ATR1149G030 Amborella trichopoda HOM05D006873 ORTHO05D008668 4.6e-42 176.4 317 42.9
CDE04G1917 Ceratophyllum demersum HOM05D000231 ORTHO05D008668 4.3e-40 169.9 303 40.6
RcHm_v2.0_Chr4g0444501 Rosa chinensis HOM05D006873 ORTHO05D008668 3.6e-39 166.8 291 38.1
FAN07G2203 Fragaria x ananassa HOM05D006873 ORTHO05D008668 4.7e-39 166.4 438 33.1
Psat2g111440 Pisum sativum HOM05D006873 ORTHO05D008668 4.7e-39 166.4 145 55.2
FAN22G1812 Fragaria x ananassa HOM05D006873 ORTHO05D008668 1.4e-38 164.9 346 37.3
FAN17G1454 Fragaria x ananassa HOM05D006873 ORTHO05D008668 9.9e-37 158.7 442 31.7
Ah.04g149970 Amaranthus hybridus HOM05D006873 ORTHO05D008668 4.9e-36 156.4 408 36.5
SEGI_33585 Sequoiadendron giganteum HOM05D006873 ORTHO05D008668 2.7e-34 150.6 187 43.9
HPP92_005898 Vanilla planifolia HOM05D006873 ORTHO05D008668 1.0e-33 148.7 308 35.4
AagrBONN_evm.TU.Sc2ySwM_362.2365 Anthoceros agrestis HOM05D006873 ORTHO05D008668 1.5e-32 144.8 158 45.6
Mapoly0001s0497 Marchantia polymorpha HOM05D006873 ORTHO05D008668 7.3e-32 142.5 162 44.4
CsaV3_5G025700 Cucumis sativus L. HOM05D006873 ORTHO05D008668 9.9e-29 132.1 256 34.0
MBI15_g12637_MAGBIO Magnolia biondii HOM05D006873 ORTHO05D008668 4.2e-27 126.7 255 37.3
Os02g0326200 Oryza sativa ssp. japonica HOM05D006873 ORTHO05D008668 2.7e-26 124.0 147 42.9
Zm00001eb234150 Zea mays HOM05D006873 ORTHO05D008668 2.3e-25 120.9 145 44.8
Pp3c1_41900 Physcomitrium patens HOM05D006873 ORTHO05D008668 1.5e-24 118.2 260 30.8
CBR_g81555 Chara braunii HOM05D006873 ORTHO05D000353 2.5e-24 117.5 166 37.3
SMO146G0062 Selaginella moellendorffii HOM05D006873 ORTHO05D008668 1.1e-22 112.1 167 34.7
Duzib251G0321 Durio zibethinus HOM05D006873 ORTHO05D008668 1.4e-19 101.7 143 38.5
Oeu001660.1 Olea europaea HOM05D006873 ORTHO05D008668 3.5e-18 97.1 66 71.2
AUR62018459 Chenopodium quinoa HOM05D000676 ORTHO05D001458 5.6e-16 89.7 66 63.6
Ah.13g077500 Amaranthus hybridus HOM05D006873 ORTHO05D008668 2.9e-12 77.4 67 55.2
CsaV3_5G025690 Cucumis sativus L. HOM05D006873 ORTHO05D008668 2.7e-10 70.9 62 53.2
CsaV3_5G025680 Cucumis sativus L. HOM05D006873 ORTHO05D008668 3.5e-10 70.5 54 55.6


User provided reference genes

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