Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000232g0190 Nicotiana tabacum HOM05D001410 ORTHO05D285963 4.1e-74 281.2 132 100.0
Nitab4.5_0000373g0210 Nicotiana tabacum HOM05D001410 ORTHO05D003969 3.9e-16 88.6 151 41.7
Nitab4.5_0006185g0010 Nicotiana tabacum HOM05D001410 ORTHO05D003969 5.2e-16 88.2 151 41.1
CAN.G1490.15 Capsicum annuum HOM05D001410 ORTHO05D003969 3.3e-15 85.5 151 39.7
Nitab4.5_0006185g0030 Nicotiana tabacum HOM05D001410 ORTHO05D003969 3.3e-15 85.5 151 39.7
Peaxi162Scf00045g00024 Petunia axillaris HOM05D001410 ORTHO05D003969 3.3e-15 85.5 176 35.8
PGSC0003DMG400028502 Solanum tuberosum HOM05D001410 ORTHO05D003969 1.7e-14 83.2 151 39.1
Peaxi162Scf00207g00533 Petunia axillaris HOM05D001410 ORTHO05D003969 2.2e-14 82.8 151 38.4
Solyc06g068320.3 Solanum lycopersicum HOM05D001410 ORTHO05D003969 4.8e-14 81.6 151 38.4
Sopen06g025590 Solanum pennellii HOM05D001410 ORTHO05D003969 4.8e-14 81.6 151 38.4
vmacro18594 Vaccinium macrocarpon HOM05D001410 ORTHO05D003969 2.4e-13 79.3 151 38.4
Nitab4.5_0002322g0120 Nicotiana tabacum HOM05D001410 ORTHO05D003969 3.1e-13 79.0 151 37.7
PGSC0003DMG400014136 Solanum tuberosum HOM05D001410 ORTHO05D003969 5.3e-13 78.2 151 36.4
CAN.G407.28 Capsicum annuum HOM05D001410 ORTHO05D011023 9.1e-13 77.4 151 37.1
Nitab4.5_0011429g0010 Nicotiana tabacum HOM05D001410 ORTHO05D003969 9.1e-13 77.4 151 37.1
SGA_v2.0_scaffold147G36388 Striga asiatica HOM05D001410 ORTHO05D003969 9.1e-13 77.4 151 37.7
Sopen03g036220 Solanum pennellii HOM05D001410 ORTHO05D003969 1.2e-12 77.0 151 35.8
SGA_v2.0_scaffold22G09857 Striga asiatica HOM05D001410 ORTHO05D003969 1.2e-12 77.0 151 37.1
Rhsim01G0000400 Rhododendron simsii HOM05D001410 ORTHO05D003969 1.6e-12 76.6 151 36.4
Hund19272 Selenicereus undatus HOM05D001410 ORTHO05D003969 1.6e-12 76.6 151 36.4
MSTRG.18762 Avicennia marina HOM05D001410 ORTHO05D003969 2.0e-12 76.3 151 36.4
Solyc03g117330.4 Solanum lycopersicum HOM05D001410 ORTHO05D003969 2.0e-12 76.3 151 35.8
Cpa.g.sc285.2 Carica papaya HOM05D001410 ORTHO05D003969 3.5e-12 75.5 151 36.4
TWI14G1260 Tripterygium wilfordii HOM05D001410 ORTHO05D003969 3.5e-12 75.5 151 36.4
Duzib133G0171 Durio zibethinus HOM05D001410 ORTHO05D003969 4.5e-12 75.1 151 37.1
Eucgr.J00690 Eucalyptus grandis HOM05D001410 ORTHO05D003969 4.5e-12 75.1 151 37.1
Oeu038081.1 Olea europaea HOM05D001410 ORTHO05D003969 4.5e-12 75.1 151 35.8
SGA_v2.0_scaffold262G45927 Striga asiatica HOM05D001410 ORTHO05D003969 4.5e-12 75.1 151 35.8
Ah.04g153520 Amaranthus hybridus HOM05D001410 ORTHO05D003969 5.9e-12 74.7 151 37.1
Migut.N02489 Erythranthe guttata HOM05D001410 ORTHO05D003969 5.9e-12 74.7 151 35.8
Sc18g0006170 Simmondsia chinensis HOM05D001410 ORTHO05D003969 7.7e-12 74.3 151 36.4
AUR62035357 Chenopodium quinoa HOM05D001410 ORTHO05D003969 1.0e-11 73.9 151 36.4
Dinv12081 Davidia involucrata HOM05D001410 ORTHO05D003969 1.0e-11 73.9 151 35.1
Nitab4.5_0003631g0060 Nicotiana tabacum HOM05D000001 ORTHO05D009753 1.0e-11 73.9 63 61.9
Rhsim02G0055200 Rhododendron simsii HOM05D001410 ORTHO05D003969 1.0e-11 73.9 151 35.8
TAR365G0316 Trochodendron aralioides HOM05D001410 ORTHO05D003969 1.0e-11 73.9 151 35.1
GSVIVG01028250001 Vitis vinifera HOM05D001410 ORTHO05D003969 1.0e-11 73.9 151 35.1
Duzib268G1550 Durio zibethinus HOM05D001410 ORTHO05D003969 1.3e-11 73.6 151 37.1
Glyma.03G224500 Glycine max HOM05D001410 ORTHO05D003969 1.3e-11 73.6 151 34.4
Glyma.19G221400 Glycine max HOM05D001410 ORTHO05D003969 1.3e-11 73.6 151 34.4
Nn1g09397 Nelumbo nucifera HOM05D001410 ORTHO05D003969 1.3e-11 73.6 151 35.8
Thecc.01G325200 Theobroma cacao HOM05D001410 ORTHO05D003969 1.3e-11 73.6 151 37.1
CiPaw.07G125500 Carya illinoinensis HOM05D001410 ORTHO05D003969 2.2e-11 72.8 151 36.4
TAR633G0527 Trochodendron aralioides HOM05D001410 ORTHO05D003969 2.2e-11 72.8 151 35.1
MSTRG.21039 Avicennia marina HOM05D001410 ORTHO05D003969 2.9e-11 72.4 151 35.1
EL10Ac3g06719 Beta vulgaris HOM05D001410 ORTHO05D003969 2.9e-11 72.4 151 35.1
Ciclev10019765m.g Citrus clementina HOM05D001410 ORTHO05D003969 2.9e-11 72.4 151 34.4
Duzib268G0962 Durio zibethinus HOM05D001410 ORTHO05D003969 2.9e-11 72.4 151 36.4
Duzib268G1140 Durio zibethinus HOM05D001410 ORTHO05D003969 2.9e-11 72.4 151 36.4
QL10p022575 Quercus lobata HOM05D001410 ORTHO05D003969 2.9e-11 72.4 151 35.8
THA.LOC104817431 Tarenaya hassleriana HOM05D001410 ORTHO05D003969 2.9e-11 72.4 151 35.8
TWI59G1486 Tripterygium wilfordii HOM05D001410 ORTHO05D003969 2.9e-11 72.4 151 35.1
CANSAT54G2973 Cannabis sativa HOM05D001410 ORTHO05D003969 3.8e-11 72.0 151 33.8
AUR62035889 Chenopodium quinoa HOM05D001410 ORTHO05D003969 3.8e-11 72.0 151 35.8
Manes.01G235100 Manihot esculenta HOM05D001410 ORTHO05D003969 3.8e-11 72.0 151 35.8
Oeu007521.3 Olea europaea HOM05D001410 ORTHO05D003969 3.8e-11 72.0 151 34.4
Atru.chr1.3904 Acer truncatum HOM05D001410 ORTHO05D003969 6.5e-11 71.2 151 34.4
SalBow6G3314 Salvia bowleyana HOM05D001410 ORTHO05D003969 6.5e-11 71.2 151 34.4
CSS0016541 Camellia sinensis var. sinensis HOM05D001410 ORTHO05D003969 8.5e-11 70.9 151 35.8
Ca_09246_v3 Cicer arietinum L. HOM05D001410 ORTHO05D003969 8.5e-11 70.9 151 34.4
Ca_15468_v3 Cicer arietinum L. HOM05D001410 ORTHO05D003969 8.5e-11 70.9 151 35.1
Dinv33171 Davidia involucrata HOM05D001410 ORTHO05D003969 8.5e-11 70.9 151 35.8
Gohir.A06G209000 Gossypium hirsutum HOM05D001410 ORTHO05D003969 8.5e-11 70.9 151 35.8
Ciclev10031253m.g Citrus clementina HOM05D001410 ORTHO05D003969 1.1e-10 70.5 151 33.8
COL.COLO4_23130 Corchorus olitorius HOM05D001410 ORTHO05D003969 1.5e-10 70.1 151 36.4
VMungo1383G1850 Vigna mungo HOM05D001410 ORTHO05D003969 1.5e-10 70.1 151 33.8
Gohir.A12G120000 Gossypium hirsutum HOM05D001410 ORTHO05D003969 1.9e-10 69.7 151 35.1
Gohir.D12G123600 Gossypium hirsutum HOM05D001410 ORTHO05D003969 1.9e-10 69.7 151 35.1
ClCG01G007170 Citrullus lanatus HOM05D001410 ORTHO05D003969 2.5e-10 69.3 151 34.4
Gohir.D06G212000 Gossypium hirsutum HOM05D001410 ORTHO05D003969 2.5e-10 69.3 151 35.1
Hma1.2p1_0484F.1_g162965 Hydrangea macrophylla HOM05D001410 ORTHO05D003969 2.5e-10 69.3 151 34.4
Atru.chr4.407 Acer truncatum HOM05D001410 ORTHO05D003969 3.2e-10 68.9 151 35.1
arahy.Tifrunner.gnm1.ann1.2022SK Arachis hypogaea HOM05D001410 ORTHO05D006167 3.2e-10 68.9 151 33.8
Cc05_g00870 Coffea canephora HOM05D001410 ORTHO05D003969 3.2e-10 68.9 151 33.1
Eucgr.K00563 Eucalyptus grandis HOM05D001410 ORTHO05D003969 3.2e-10 68.9 151 32.5
Lj1g0011311 Lotus japonicus HOM05D001410 ORTHO05D003969 3.2e-10 68.9 150 32.7
MBI14_g06389_MAGBIO Magnolia biondii HOM05D001410 ORTHO05D003969 3.2e-10 68.9 151 33.8
SalBow3G3029 Salvia bowleyana HOM05D001410 ORTHO05D003969 3.2e-10 68.9 151 33.1
TWI32G0004 Tripterygium wilfordii HOM05D001410 ORTHO05D003969 3.2e-10 68.9 151 34.4
Haze_05147 Corylus avellana HOM05D001410 ORTHO05D003969 4.2e-10 68.6 151 35.8
Potri.014G112400 Populus trichocarpa HOM05D001410 ORTHO05D003969 4.2e-10 68.6 151 33.8
QL11p011484 Quercus lobata HOM05D001410 ORTHO05D003969 4.2e-10 68.6 151 34.4
Hma1.2p1_0484F.1_g162960 Hydrangea macrophylla HOM05D001410 ORTHO05D003969 5.5e-10 68.2 151 33.8
Lj6g0016572 Lotus japonicus HOM05D001410 ORTHO05D003969 5.5e-10 68.2 151 31.8
Nitab4.5_0000916g0050 Nicotiana tabacum HOM05D000001 ORTHO05D009753 5.5e-10 68.2 44 68.2
Potri.002G187000 Populus trichocarpa HOM05D001410 ORTHO05D003969 5.5e-10 68.2 151 34.4
Sc25g0004870 Simmondsia chinensis HOM05D001410 ORTHO05D003969 5.5e-10 68.2 151 34.4
Aa31LG10G16100 Aethionema arabicum HOM05D001410 ORTHO05D003969 7.2e-10 67.8 151 33.1
arahy.Tifrunner.gnm1.ann1.QYSL7K Arachis hypogaea HOM05D001410 ORTHO05D003969 7.2e-10 67.8 151 33.1
Gorai.008G134700 Gossypium raimondii HOM05D001410 ORTHO05D003969 7.2e-10 67.8 151 34.4
PGR142G3315 Punica granatum HOM05D001410 ORTHO05D003969 7.2e-10 67.8 151 34.4
Dinv29495 Davidia involucrata HOM05D001410 ORTHO05D003969 9.4e-10 67.4 151 34.4
MBI18_g10371_MAGBIO Magnolia biondii HOM05D001410 ORTHO05D006167 9.4e-10 67.4 151 33.1
MELO3C017711.2 Cucumis melo HOM05D001410 ORTHO05D003969 1.2e-09 67.0 151 33.8
unitig_27.g25116 Utricularia gibba HOM05D001410 ORTHO05D003969 1.2e-09 67.0 151 33.8
Gohir.D06G151800 Gossypium hirsutum HOM05D001410 ORTHO05D003969 1.6e-09 66.6 150 34.7
Psat3g016680 Pisum sativum HOM05D001410 ORTHO05D003969 1.6e-09 66.6 151 32.5
Actinidia20965 Actinidia chinensis HOM05D001410 ORTHO05D003969 2.1e-09 66.2 151 33.8
Medtr7g110660 Medicago truncatula HOM05D001410 ORTHO05D003969 2.1e-09 66.2 151 33.1
ClCG07G015700 Citrullus lanatus HOM05D001410 ORTHO05D003969 2.7e-09 65.9 151 33.1
Migut.D02441 Erythranthe guttata HOM05D001410 ORTHO05D003969 2.7e-09 65.9 151 31.8
Sed0015133 Sechium edule HOM05D001410 ORTHO05D003969 2.7e-09 65.9 151 32.5
Carub.0005s2008 Capsella rubella HOM05D001410 ORTHO05D003969 3.6e-09 65.5 151 31.1
CDE08G1059 Ceratophyllum demersum HOM05D001410 ORTHO05D003969 3.6e-09 65.5 151 33.1
Prupe.1G103500 Prunus persica HOM05D001410 ORTHO05D003969 3.6e-09 65.5 151 33.8
CsaV3_4G003400 Cucumis sativus L. HOM05D001410 ORTHO05D003969 4.7e-09 65.1 151 33.1
Aqoxy6G01698 Aquilegia oxysepala HOM05D001410 ORTHO05D003969 6.1e-09 64.7 151 31.8
CARHR172460 Cardamine hirsuta HOM05D001410 ORTHO05D003969 6.1e-09 64.7 151 32.5
BcaB02g07357 Brassica carinata HOM05D001410 ORTHO05D003969 8.0e-09 64.3 151 31.8
BcaC07g40705 Brassica carinata HOM05D001410 ORTHO05D003969 8.0e-09 64.3 139 32.4
BcaC08g45185 Brassica carinata HOM05D001410 ORTHO05D003969 8.0e-09 64.3 151 31.8
A07p25850 Brassica napus HOM05D001410 ORTHO05D000704 8.0e-09 64.3 151 31.8
C06p28090 Brassica napus HOM05D001410 ORTHO05D003969 8.0e-09 64.3 151 31.8
BolC6t37975H Brassica oleracea HOM05D001410 ORTHO05D003969 8.0e-09 64.3 151 31.8
BraA07t30232Z Brassica rapa HOM05D001410 ORTHO05D003969 8.0e-09 64.3 151 31.8
Lj3C841G7 Lonicera japonica HOM05D001410 ORTHO05D003969 8.0e-09 64.3 151 33.8
Medtr3g048190 Medicago truncatula HOM05D001410 ORTHO05D003969 1.0e-08 63.9 151 33.1
Sed0023675 Sechium edule HOM05D001410 ORTHO05D003969 1.0e-08 63.9 151 33.1
Sabra14G0082700 Salix brachista HOM05D001410 ORTHO05D003969 1.4e-08 63.5 151 31.8
Lsat_1_v5_gn_8_103640 Lactuca sativa HOM05D001410 ORTHO05D003969 3.0e-08 62.4 150 32.0
HPP92_001179 Vanilla planifolia HOM05D001410 ORTHO05D003969 3.0e-08 62.4 151 31.8
Carub.0005s2887 Capsella rubella HOM05D001410 ORTHO05D003969 5.2e-08 61.6 151 29.8
Medtr3g114570 Medicago truncatula HOM05D001410 ORTHO05D003969 8.8e-08 60.8 151 31.1
Aqoxy6G01697 Aquilegia oxysepala HOM05D001410 ORTHO05D011023 2.6e-07 59.3 108 35.2
Thhalv10005900m.g Eutrema salsugineum HOM05D001410 ORTHO05D003969 2.6e-07 59.3 151 29.1
Gohir.D12G140050 Gossypium hirsutum HOM05D001410 ORTHO05D011023 5.7e-07 58.2 58 53.4
HPP92_001947 Vanilla planifolia HOM05D001410 ORTHO05D003969 7.5e-07 57.8 151 31.1
Cfa004912 Carpinus fangiana HOM05D001410 ORTHO05D003969 4.8e-06 55.1 126 34.1
Gohir.D07G127900 Gossypium hirsutum HOM05D001410 ORTHO05D011023 4.8e-06 55.1 68 47.1
Gorai.001G106400 Gossypium raimondii HOM05D001410 ORTHO05D011023 4.8e-06 55.1 68 47.1
Nn7g37405 Nelumbo nucifera HOM05D001410 ORTHO05D003969 6.3e-06 54.7 66 45.5
MELO3C005193.2 Cucumis melo HOM05D001410 ORTHO05D003969 8.2e-06 54.3 118 33.1
Gohir.D13G173600 Gossypium hirsutum HOM05D001410 ORTHO05D011023 8.2e-06 54.3 68 45.6
Phvul.001G218300 Phaseolus vulgaris HOM05D001410 ORTHO05D003969 8.2e-06 54.3 118 30.5


User provided reference genes

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