Gene: Solyc06g068320.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc06g068320.3
- Transcript Identifier Solyc06g068320.3.1
- Gene Type Coding gene
- Location SL4.0ch06 : 39956428-39963103 : negative
Gene Family Information
- ID HOM05D001410
- #Genes/#Species 445/99
- Phylogenetic origin
- ID ORTHO05D003969
- #Genes/#Species 196/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc06g068320.3.1
- uniprot A0A3Q7HT73
- gene_id Solyc06g068320
Descriptions
- Description Proline-tRNA ligase (AHRD V3.3 *** X8JBM9_9HOMO)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006433 | IBA IEA | GOA Database | prolyl-tRNA aminoacylation | |
| GO:0006433 | IEA | InterPro | prolyl-tRNA aminoacylation | |
| GO:0006418 | IEA | GOA Database | tRNA aminoacylation for protein translation | |
| GO:0006418 | IEA | InterPro | tRNA aminoacylation for protein translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004812 | IEA | GOA Database | aminoacyl-tRNA ligase activity | |
| GO:0004812 | IEA | InterPro | aminoacyl-tRNA ligase activity | |
| GO:0004827 | IBA IEA | GOA Database | proline-tRNA ligase activity | |
| GO:0004827 | IEA | InterPro | proline-tRNA ligase activity | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0016874 | IEA | GOA Database | ligase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G62120 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT3G62120 |
| GO:0005737 | IBA IEA | GOA Database | cytoplasm | |
| GO:0005737 | IEA | InterPro | cytoplasm | |
| GO:0017101 | IBA | GOA Database | aminoacyl-tRNA synthetase multienzyme complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR033721 | Prolyl-tRNA synthetase, catalytic domain |
| IPR002316 | Proline-tRNA ligase, class IIa |
| IPR004154 | Anticodon-binding |
| IPR017449 | Prolyl-tRNA synthetase, class II |
| IPR002314 | Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) |
| IPR016061 | Proline-tRNA ligase, class II, C-terminal |
| IPR004499 | Proline-tRNA ligase, class IIa, archaeal-type |
| IPR036621 | Anticodon-binding domain superfamily |
| Mapman id | Description |
|---|---|
| 17.2.17 | Protein biosynthesis.aminoacyl-tRNA synthetase activities.proline-tRNA ligase |