Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000129g0230 Nicotiana tabacum HOM05D005906 ORTHO05D007359 0.0e+00 1150.6 655 100.0
Nitab4.5_0001983g0010 Nicotiana tabacum HOM05D005906 ORTHO05D007359 0.0e+00 1090.9 672 91.5
Sopen04g003870 Solanum pennellii HOM05D005906 ORTHO05D007359 2.1e-275 952.2 661 82.5
Solyc04g008700.3 Solanum lycopersicum HOM05D005906 ORTHO05D007359 6.7e-274 947.2 661 82.1
CAN.G419.29 Capsicum annuum HOM05D005906 ORTHO05D007359 1.0e-261 906.7 652 76.8
Peaxi162Scf00329g00515 Petunia axillaris HOM05D005906 ORTHO05D007359 9.1e-247 857.1 660 74.1
CSS0007611 Camellia sinensis var. sinensis HOM05D005906 ORTHO05D007359 3.3e-132 476.5 676 47.0
GSVIVG01010209001 Vitis vinifera HOM05D005906 ORTHO05D007359 1.3e-123 448.0 688 45.1
Dinv12052 Davidia involucrata HOM05D005906 ORTHO05D007359 8.2e-123 445.3 503 54.7
Rhsim09G0071900 Rhododendron simsii HOM05D005906 ORTHO05D007359 1.0e-120 438.3 700 43.9
vmacro16015 Vaccinium macrocarpon HOM05D005906 ORTHO05D007359 4.9e-107 392.9 707 43.1
Nn3g18680 Nelumbo nucifera HOM05D005906 ORTHO05D007359 9.2e-106 388.7 700 41.1
Haze_11727 Corylus avellana HOM05D005906 ORTHO05D007359 8.6e-104 382.1 687 40.0
Cfa008717 Carpinus fangiana HOM05D005906 ORTHO05D007359 3.3e-103 380.2 687 39.6
Actinidia04315 Actinidia chinensis HOM05D005906 ORTHO05D007359 1.0e-101 375.2 412 53.2
Oeu022359.1 Olea europaea HOM05D005906 ORTHO05D007359 2.6e-100 370.5 643 40.4
TAR371G1124 Trochodendron aralioides HOM05D005906 ORTHO05D007359 6.4e-99 365.9 571 45.0
Atru.chr11.1229 Acer truncatum HOM05D005906 ORTHO05D007359 2.0e-97 360.9 685 39.9
Atru.chr11.1316 Acer truncatum HOM05D005906 ORTHO05D007359 1.7e-96 357.8 685 39.7
QL03p043467 Quercus lobata HOM05D005906 ORTHO05D007359 1.8e-93 347.8 679 39.5
Migut.N00351 Erythranthe guttata HOM05D005906 ORTHO05D007359 9.2e-90 335.5 503 49.7
Gohir.A01G145818 Gossypium hirsutum HOM05D005906 ORTHO05D007359 3.0e-88 330.5 515 42.3
Duzib251G0270 Durio zibethinus HOM05D005906 ORTHO05D007359 3.9e-88 330.1 516 42.6
DCAR_006599 Daucus carota HOM05D005906 ORTHO05D007359 1.1e-87 328.6 415 52.8
Gorai.002G167700 Gossypium raimondii HOM05D005906 ORTHO05D007359 8.1e-86 322.4 500 43.2
Aqoxy3G04280 Aquilegia oxysepala HOM05D005906 ORTHO05D007359 1.1e-85 322.0 689 38.5
MBI03_g33918_MAGBIO Magnolia biondii HOM05D005906 ORTHO05D007359 1.1e-85 322.0 677 38.1
CiPaw.05G166700 Carya illinoinensis HOM05D005906 ORTHO05D007359 1.5e-84 318.2 686 36.7
Gohir.D01G138300 Gossypium hirsutum HOM05D005906 ORTHO05D007359 2.6e-84 317.4 453 44.6
Prupe.1G345100 Prunus persica HOM05D005906 ORTHO05D007359 2.6e-84 317.4 541 41.2
Potri.010G170400 Populus trichocarpa HOM05D005906 ORTHO05D007359 3.7e-83 313.5 514 42.6
ECA246G1682 Erigeron canadensis HOM05D005906 ORTHO05D007359 8.3e-83 312.4 670 37.6
Ciclev10030612m.g Citrus clementina HOM05D005906 ORTHO05D007359 1.2e-81 308.5 671 37.6
AUR62015199 Chenopodium quinoa HOM05D005906 ORTHO05D007359 2.7e-81 307.4 416 50.7
RcHm_v2.0_Chr4g0446421 Rosa chinensis HOM05D005906 ORTHO05D007359 6.0e-81 306.2 667 37.2
ATR0618G038 Amborella trichopoda HOM05D005906 ORTHO05D007359 3.9e-80 303.5 710 35.5
Thecc.02G295800 Theobroma cacao HOM05D005906 ORTHO05D007359 6.6e-80 302.8 418 47.1
Sabra10G0130100 Salix brachista HOM05D005906 ORTHO05D007359 7.3e-79 299.3 578 39.1
Sc10g0007040 Simmondsia chinensis HOM05D005906 ORTHO05D007359 2.8e-78 297.4 469 45.8
Lalb_Chr01g0001511 Lupinus albus HOM05D005906 ORTHO05D007359 4.7e-78 296.6 502 40.2
AUR62017662 Chenopodium quinoa HOM05D005906 ORTHO05D007359 8.1e-78 295.8 416 49.3
Eucgr.G02565 Eucalyptus grandis HOM05D005906 ORTHO05D007359 3.1e-77 293.9 664 36.9
Lju1295A4T31 Lonicera japonica HOM05D005906 ORTHO05D007359 4.0e-77 293.5 458 45.0
SGA_v2.0_scaffold317G48430 Striga asiatica HOM05D005906 ORTHO05D007359 2.0e-76 291.2 529 43.9
TWI53G0095 Tripterygium wilfordii HOM05D005906 ORTHO05D007359 2.0e-76 291.2 592 37.8
EL10Ac9g22918 Beta vulgaris HOM05D005906 ORTHO05D007359 9.9e-76 288.9 324 50.3
VMungo1127G1981 Vigna mungo HOM05D005906 ORTHO05D007359 1.7e-75 288.1 691 35.6
Glyma.11G102600 Glycine max HOM05D005906 ORTHO05D007359 2.2e-75 287.7 667 37.0
MD16G1000200 Malus domestica HOM05D005906 ORTHO05D007359 2.2e-75 287.7 475 41.7
Glyma.11G103100 Glycine max HOM05D005906 ORTHO05D007359 6.4e-75 286.2 667 37.2
Lj3g0019719 Lotus japonicus HOM05D005906 ORTHO05D007359 7.1e-74 282.7 472 43.9
arahy.Tifrunner.gnm1.ann1.KE9NE3 Arachis hypogaea HOM05D005906 ORTHO05D007359 1.2e-73 282.0 683 37.8
Glyma.12G028100 Glycine max HOM05D005906 ORTHO05D007359 1.3e-72 278.5 661 36.9
HanXRQChr17g0540691 Helianthus annuus HOM05D005906 ORTHO05D007359 3.0e-72 277.3 622 37.9
FvH4_4g36700 Fragaria vesca HOM05D005906 ORTHO05D007359 1.1e-71 275.4 665 35.0
FAN12G0559 Fragaria x ananassa HOM05D005906 ORTHO05D007359 4.3e-71 273.5 665 34.9
Os10g0485000 Oryza sativa ssp. japonica HOM05D005906 ORTHO05D007359 9.6e-71 272.3 618 35.3
PSO063G6838 Papaver somniferum HOM05D005906 ORTHO05D007359 1.2e-70 271.9 451 45.2
PSO782G0435 Papaver somniferum HOM05D005906 ORTHO05D007359 1.6e-70 271.6 441 45.8
Sed0021796 Sechium edule HOM05D005906 ORTHO05D007359 5.2e-69 266.5 467 40.5
PGR142G1078 Punica granatum HOM05D005906 ORTHO05D007359 6.9e-69 266.2 526 43.7
FAN17G1621 Fragaria x ananassa HOM05D005906 ORTHO05D007359 1.2e-68 265.4 670 33.6
Phvul.011G031500 Phaseolus vulgaris HOM05D005906 ORTHO05D007359 1.2e-68 265.4 660 34.5
MELO3C024279.2 Cucumis melo HOM05D005906 ORTHO05D007359 3.4e-68 263.8 457 41.4
Ca_03032_v3 Cicer arietinum L. HOM05D005906 ORTHO05D007359 7.6e-68 262.7 534 41.4
FAN07G0309 Fragaria x ananassa HOM05D005906 ORTHO05D007359 2.9e-67 260.8 668 34.1
arahy.Tifrunner.gnm1.ann1.LWY0NT Arachis hypogaea HOM05D005906 ORTHO05D007359 3.8e-67 260.4 601 38.3
Lsat_1_v5_gn_0_9300 Lactuca sativa HOM05D005906 ORTHO05D007359 6.4e-67 259.6 567 39.0
Medtr4g074440 Medicago truncatula HOM05D005906 ORTHO05D007359 6.4e-67 259.6 365 47.4
TWI74G1493 Tripterygium wilfordii HOM05D005906 ORTHO05D007359 4.2e-66 256.9 616 36.2
MD13G1007900 Malus domestica HOM05D005906 ORTHO05D007359 2.7e-65 254.2 374 45.5
CsaV3_7G033650 Cucumis sativus L. HOM05D005906 ORTHO05D007359 1.3e-64 251.9 457 40.3
TPR.G21563 Trifolium pratense HOM05D005906 ORTHO05D007359 3.0e-64 250.8 532 37.8
ClCG09G001670 Citrullus lanatus HOM05D005906 ORTHO05D007359 1.9e-63 248.1 464 41.6
Manes.03G080900 Manihot esculenta HOM05D005906 ORTHO05D007359 3.3e-63 247.3 245 60.8
CANSAT64G0121 Cannabis sativa HOM05D005906 ORTHO05D007359 6.9e-61 239.6 294 51.0
Psat7g176600 Pisum sativum HOM05D005906 ORTHO05D007359 2.4e-58 231.1 604 36.8
HPP92_015160 Vanilla planifolia HOM05D005906 ORTHO05D007359 7.9e-57 226.1 692 34.4
Thhalv10020134m.g Eutrema salsugineum HOM05D005906 ORTHO05D007359 1.8e-56 224.9 401 39.9
Sp3g17850 Schrenkiella parvula HOM05D005906 ORTHO05D007359 5.6e-55 219.9 403 39.7
Carub.0003s1972 Capsella rubella HOM05D005906 ORTHO05D007359 7.4e-55 219.5 389 39.8
BraA05t21811Z Brassica rapa HOM05D005906 ORTHO05D007359 2.1e-54 218.0 400 39.5
SEGI_27443 Sequoiadendron giganteum HOM05D005906 ORTHO05D007359 4.0e-53 213.8 434 36.6
AL3G33350 Arabidopsis lyrata HOM05D005906 ORTHO05D007359 1.5e-52 211.8 407 40.3
AT3G19840 Arabidopsis thaliana HOM05D005906 ORTHO05D007359 2.0e-52 211.5 451 38.4
BcaC05g28400 Brassica carinata HOM05D005906 ORTHO05D007359 5.8e-52 209.9 432 36.6
A05p29280 Brassica napus HOM05D005906 ORTHO05D007359 5.8e-52 209.9 445 37.1
BolC5t33205H Brassica oleracea HOM05D005906 ORTHO05D007359 5.8e-52 209.9 432 36.6
C05p44790 Brassica napus HOM05D005906 ORTHO05D007359 1.3e-51 208.8 448 36.2
arahy.Tifrunner.gnm1.ann1.HBZ9IW Arachis hypogaea HOM05D005906 ORTHO05D007359 2.2e-51 208.0 195 55.4
CARHR095360 Cardamine hirsuta HOM05D005906 ORTHO05D007359 1.1e-50 205.7 242 49.2
BcaB06g26053 Brassica carinata HOM05D005906 ORTHO05D007359 1.0e-48 199.1 442 36.7
CDE08G0300 Ceratophyllum demersum HOM05D005906 ORTHO05D007359 1.8e-48 198.4 652 32.4
CDE04G3187 Ceratophyllum demersum HOM05D005906 ORTHO05D007359 2.5e-47 194.5 662 33.4
Mapoly0048s0088 Marchantia polymorpha HOM05D005906 ORTHO05D007359 5.6e-47 193.4 290 43.4
unitig_26.g9977 Utricularia gibba HOM05D005906 ORTHO05D007359 2.8e-46 191.0 392 37.2
COL.COLO4_27510 Corchorus olitorius HOM05D005906 ORTHO05D007359 1.9e-42 178.3 261 43.7
Pp3c7_20890 Physcomitrium patens HOM05D005906 ORTHO05D007359 8.7e-40 169.5 386 34.7
Pp3c11_2890 Physcomitrium patens HOM05D005906 ORTHO05D007359 3.2e-34 151.0 399 33.8
Nitab4.5_0005621g0040 Nicotiana tabacum HOM05D005906 ORTHO05D007359 3.3e-31 141.0 95 85.3
HanXRQChr13g0425271 Helianthus annuus HOM05D005906 ORTHO05D007359 4.3e-31 140.6 172 47.1
CBR_g3777 Chara braunii HOM05D005906 ORTHO05D007359 5.7e-31 140.2 659 29.6
SMO347G0007 Selaginella moellendorffii HOM05D005906 ORTHO05D007359 1.9e-26 125.2 400 32.0
COL.COLO4_16625 Corchorus olitorius HOM05D005906 ORTHO05D007359 3.2e-26 124.4 163 49.1
Aa31LG8G6610 Aethionema arabicum HOM05D005906 ORTHO05D007359 4.2e-26 124.0 419 32.7
Nitab4.5_0010403g0020 Nicotiana tabacum HOM05D005906 ORTHO05D007359 4.1e-21 107.5 67 89.6
Cre09.g393551 Chlamydomonas reinhardtii HOM05D005906 ORTHO05D007359 4.7e-17 94.0 89 43.8
Cpa.g.c31481.2 Carica papaya HOM05D005906 ORTHO05D007359 2.6e-12 78.2 302 32.8
Lsat_1_v5_gn_8_74860 Lactuca sativa HOM05D005906 ORTHO05D007359 1.8e-08 65.5 95 45.3
Nitab4.5_0001093g0090 Nicotiana tabacum HOM05D002048 ORTHO05D002146 5.7e-07 60.5 239 27.2


User provided reference genes

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