Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000061g0410 Nicotiana tabacum HOM05D003924 ORTHO05D005216 5.6e-156 554.3 291 100.0
Nitab4.5_0000561g0080 Nicotiana tabacum HOM05D003924 ORTHO05D005216 2.3e-141 505.8 313 87.2
Sopen04g020010 Solanum pennellii HOM05D003924 ORTHO05D005216 5.6e-132 474.6 313 82.1
Peaxi162Scf01024g00323 Petunia axillaris HOM05D003924 ORTHO05D005216 3.7e-131 471.9 313 81.2
CAN.G742.17 Capsicum annuum HOM05D003924 ORTHO05D005216 9.9e-129 463.8 313 80.2
CSS0019567 Camellia sinensis var. sinensis HOM05D003924 ORTHO05D005216 5.5e-119 431.4 313 73.5
Haze_16947 Corylus avellana HOM05D003924 ORTHO05D005216 8.7e-117 424.1 313 72.5
Cfa001582 Carpinus fangiana HOM05D003924 ORTHO05D005216 3.3e-116 422.2 313 72.2
Thecc.10G066000 Theobroma cacao HOM05D003924 ORTHO05D005216 4.3e-116 421.8 313 71.9
Cc09_g02440 Coffea canephora HOM05D003924 ORTHO05D005216 7.4e-116 421.0 313 73.2
Actinidia03018 Actinidia chinensis HOM05D003924 ORTHO05D005216 9.7e-116 420.6 313 72.8
Dinv17348 Davidia involucrata HOM05D003924 ORTHO05D005216 1.3e-115 420.2 313 71.6
MSTRG.9355 Avicennia marina HOM05D003924 ORTHO05D005216 2.8e-115 419.1 319 73.4
CiPaw.01G277600 Carya illinoinensis HOM05D003924 ORTHO05D005216 4.8e-115 418.3 313 71.9
GSVIVG01016353001 Vitis vinifera HOM05D003924 ORTHO05D005216 1.4e-114 416.8 313 70.6
Gorai.010G203700 Gossypium raimondii HOM05D003924 ORTHO05D005216 4.1e-114 415.2 313 70.9
Gohir.A06G179002 Gossypium hirsutum HOM05D003924 ORTHO05D005216 1.2e-113 413.7 313 70.6
Rhsim03G0121600 Rhododendron simsii HOM05D003924 ORTHO05D005216 1.2e-113 413.7 313 70.9
Duzib106G1600 Durio zibethinus HOM05D003924 ORTHO05D005216 1.5e-113 413.3 313 70.6
vmacro17942 Vaccinium macrocarpon HOM05D003924 ORTHO05D005216 2.0e-113 412.9 313 70.3
Gohir.D06G174100 Gossypium hirsutum HOM05D003924 ORTHO05D005216 3.4e-113 412.1 313 70.6
Potri.010G216100 Populus trichocarpa HOM05D003924 ORTHO05D005216 5.9e-113 411.4 313 70.6
Potri.008G045400 Populus trichocarpa HOM05D003924 ORTHO05D005216 1.3e-112 410.2 313 70.3
SalBow1G8295 Salvia bowleyana HOM05D003924 ORTHO05D005216 1.7e-112 409.8 344 67.4
Manes.07G101600 Manihot esculenta HOM05D003924 ORTHO05D005216 2.2e-112 409.5 315 70.5
COL.COLO4_23765 Corchorus olitorius HOM05D003924 ORTHO05D005216 6.5e-112 407.9 313 70.9
Ciclev10018539m.g Citrus clementina HOM05D003924 ORTHO05D005216 4.2e-111 405.2 315 69.5
DCAR_027685 Daucus carota HOM05D003924 ORTHO05D005216 4.2e-111 405.2 314 70.7
Eucgr.G02792 Eucalyptus grandis HOM05D003924 ORTHO05D005216 5.5e-111 404.8 313 69.3
Nn2g10624 Nelumbo nucifera HOM05D003924 ORTHO05D005216 1.6e-110 403.3 313 68.1
ATR0810G286 Amborella trichopoda HOM05D003924 ORTHO05D005216 4.6e-110 401.7 313 67.4
RcHm_v2.0_Chr3g0482831 Rosa chinensis HOM05D003924 ORTHO05D005216 1.0e-109 400.6 315 69.8
PGR142G3475 Punica granatum HOM05D003924 ORTHO05D005216 1.8e-109 399.8 313 68.4
Ah.16g101370 Amaranthus hybridus HOM05D003924 ORTHO05D005216 2.3e-109 399.4 278 73.4
MBI19_g06147_MAGBIO Magnolia biondii HOM05D003924 ORTHO05D005216 8.8e-109 397.5 313 68.4
MD07G1181100 Malus domestica HOM05D003924 ORTHO05D005216 1.5e-108 396.7 313 68.7
Cpa.g.sc1.275 Carica papaya HOM05D003924 ORTHO05D005216 4.3e-108 395.2 321 68.2
PSO339G1038 Papaver somniferum HOM05D003924 ORTHO05D005216 1.3e-107 393.7 313 68.1
FvH4_4g12630 Fragaria vesca HOM05D003924 ORTHO05D005216 1.7e-107 393.3 315 67.9
THA.LOC104809987 Tarenaya hassleriana HOM05D003924 ORTHO05D005216 2.2e-107 392.9 311 68.8
FAN12G0529 Fragaria x ananassa HOM05D003924 ORTHO05D005216 2.8e-107 392.5 312 68.3
FAN17G0927 Fragaria x ananassa HOM05D003924 ORTHO05D005216 3.7e-107 392.1 312 67.9
unitig_899.g14816 Utricularia gibba HOM05D003924 ORTHO05D005216 3.7e-107 392.1 313 68.7
Prupe.2G220200 Prunus persica HOM05D003924 ORTHO05D005216 1.4e-106 390.2 286 72.0
MD01G1113500 Malus domestica HOM05D003924 ORTHO05D005216 2.4e-106 389.4 313 68.1
FAN07G1557 Fragaria x ananassa HOM05D003924 ORTHO05D005216 3.1e-106 389.0 312 67.9
FAN22G0546 Fragaria x ananassa HOM05D003924 ORTHO05D005216 4.1e-106 388.7 315 67.3
Carub.0004s2131 Capsella rubella HOM05D003924 ORTHO05D005216 5.3e-106 388.3 311 67.2
Sed0000671 Sechium edule HOM05D003924 ORTHO05D005216 1.2e-105 387.1 312 66.0
CARHR134000 Cardamine hirsuta HOM05D003924 ORTHO05D005216 1.5e-105 386.7 308 68.2
CsaV3_5G026020 Cucumis sativus L. HOM05D003924 ORTHO05D005216 1.5e-105 386.7 312 66.7
MELO3C025497.2 Cucumis melo HOM05D003924 ORTHO05D005216 2.0e-105 386.3 312 66.7
AT2G39260 Arabidopsis thaliana HOM05D003924 ORTHO05D005216 2.6e-105 386.0 311 67.2
TAR623G0957 Trochodendron aralioides HOM05D003924 ORTHO05D005216 2.6e-105 386.0 313 67.4
Migut.D01216 Erythranthe guttata HOM05D003924 ORTHO05D005216 3.4e-105 385.6 319 68.0
Sabra08G0031600 Salix brachista HOM05D003924 ORTHO05D005216 3.4e-105 385.6 349 62.2
Sabra10G0167200 Salix brachista HOM05D003924 ORTHO05D005216 3.4e-105 385.6 313 67.4
Aa31LG5G20240 Aethionema arabicum HOM05D003924 ORTHO05D005216 5.9e-105 384.8 308 67.2
AUR62023249 Chenopodium quinoa HOM05D003924 ORTHO05D005216 1.3e-104 383.6 301 68.4
AUR62023203 Chenopodium quinoa HOM05D003924 ORTHO05D005216 1.7e-104 383.3 301 67.8
Aqoxy6G01538 Aquilegia oxysepala HOM05D003924 ORTHO05D005216 5.0e-104 381.7 313 64.5
ECA238G4557 Erigeron canadensis HOM05D003924 ORTHO05D005216 6.5e-104 381.3 313 65.5
Sp4g21570 Schrenkiella parvula HOM05D003924 ORTHO05D005216 6.5e-104 381.3 311 65.9
SpUn0018_0100 Schrenkiella parvula HOM05D003924 ORTHO05D005216 6.5e-104 381.3 311 65.9
Thhalv10016159m.g Eutrema salsugineum HOM05D003924 ORTHO05D005216 8.5e-104 380.9 311 67.2
TWI15G1255 Tripterygium wilfordii HOM05D003924 ORTHO05D005216 8.5e-104 380.9 313 66.1
AL4G36570 Arabidopsis lyrata HOM05D003924 ORTHO05D005216 2.5e-103 379.4 291 69.8
Lalb_Chr08g0233271 Lupinus albus HOM05D003924 ORTHO05D005216 2.5e-103 379.4 313 66.1
BcaB01g03607 Brassica carinata HOM05D003924 ORTHO05D005216 4.2e-103 378.6 311 65.3
Phvul.009G216500 Phaseolus vulgaris HOM05D003924 ORTHO05D005216 7.2e-103 377.9 313 66.8
A03p21980 Brassica napus HOM05D003924 ORTHO05D005216 9.4e-103 377.5 300 67.7
BraA03t11433Z Brassica rapa HOM05D003924 ORTHO05D005216 9.4e-103 377.5 300 67.7
HanXRQChr14g0460881 Helianthus annuus HOM05D003924 ORTHO05D005216 9.4e-103 377.5 313 65.2
PSO384G1475 Papaver somniferum HOM05D003924 ORTHO05D005216 9.4e-103 377.5 292 68.5
Lalb_Chr11g0073411 Lupinus albus HOM05D003924 ORTHO05D005216 1.2e-102 377.1 313 65.2
BcaB01g03658 Brassica carinata HOM05D003924 ORTHO05D005216 1.6e-102 376.7 312 66.0
C03p26070 Brassica napus HOM05D003924 ORTHO05D005216 1.6e-102 376.7 312 66.0
BolC3t14991H Brassica oleracea HOM05D003924 ORTHO05D005216 1.6e-102 376.7 312 66.0
VMungo1309G1679 Vigna mungo HOM05D003924 ORTHO05D005216 3.6e-102 375.6 313 66.5
CDE01G0014 Ceratophyllum demersum HOM05D003924 ORTHO05D005216 1.8e-101 373.2 313 64.9
HanXRQChr07g0200911 Helianthus annuus HOM05D003924 ORTHO05D005216 2.3e-101 372.9 313 64.9
Medtr2g048630 Medicago truncatula HOM05D003924 ORTHO05D005216 2.3e-101 372.9 313 65.2
Glyma.09G087900 Glycine max HOM05D003924 ORTHO05D005216 3.0e-101 372.5 313 65.8
Sc10g0000900 Simmondsia chinensis HOM05D003924 ORTHO05D005216 3.9e-101 372.1 289 68.5
Hund16198 Selenicereus undatus HOM05D003924 ORTHO05D005216 5.1e-101 371.7 322 64.0
Lj6g0026487 Lotus japonicus HOM05D003924 ORTHO05D005216 8.8e-101 370.9 313 64.5
arahy.Tifrunner.gnm1.ann1.VLH7KT Arachis hypogaea HOM05D003924 ORTHO05D005216 3.3e-100 369.0 295 67.1
Glyma.15G194000 Glycine max HOM05D003924 ORTHO05D005216 3.3e-100 369.0 313 64.9
Duzib114G0370 Durio zibethinus HOM05D003924 ORTHO05D005216 7.4e-100 367.9 239 79.1
TPR.G31980 Trifolium pratense HOM05D003924 ORTHO05D005216 9.7e-100 367.5 313 63.6
arahy.Tifrunner.gnm1.ann1.MQZ1GR Arachis hypogaea HOM05D003924 ORTHO05D005216 1.3e-99 367.1 295 66.4
Lsat_1_v5_gn_2_116140 Lactuca sativa HOM05D003924 ORTHO05D005216 2.2e-99 366.3 283 67.5
QL08p057163 Quercus lobata HOM05D003924 ORTHO05D005216 1.4e-98 363.6 278 70.9
Ca_02521_v3 Cicer arietinum L. HOM05D003924 ORTHO05D005216 5.3e-98 361.7 313 62.9
Oeu033837.1 Olea europaea HOM05D003924 ORTHO05D005216 7.0e-98 361.3 286 68.9
SMO116G0081 Selaginella moellendorffii HOM05D003924 ORTHO05D005216 4.5e-97 358.6 309 63.1
Atru.chr2.540 Acer truncatum HOM05D003924 ORTHO05D005216 1.0e-96 357.5 313 63.9
BcaB06g29071 Brassica carinata HOM05D003924 ORTHO05D005216 1.3e-96 357.1 300 62.7
Hma1.2p1_3877F.1_g337880 Hydrangea macrophylla HOM05D003924 ORTHO05D005216 1.3e-96 357.1 263 71.1
Zm00001eb247890 Zea mays HOM05D003924 ORTHO05D005216 1.7e-96 356.7 318 60.4
Duzib128G0369 Durio zibethinus HOM05D003924 ORTHO05D005216 1.1e-95 354.0 313 64.9
Lj8C94T13 Lonicera japonica HOM05D003924 ORTHO05D005216 7.2e-95 351.3 317 61.8
Zm00001eb185340 Zea mays HOM05D003924 ORTHO05D005216 2.1e-94 349.7 278 64.4
EL10Ac2g04495 Beta vulgaris HOM05D003924 ORTHO05D005216 8.0e-94 347.8 336 58.6
HPP92_017237 Vanilla planifolia HOM05D003924 ORTHO05D005216 3.0e-93 345.9 313 61.7
Pp3c11_19990 Physcomitrium patens HOM05D003924 ORTHO05D005216 3.9e-93 345.5 300 62.7
Mapoly0202s0011 Marchantia polymorpha HOM05D003924 ORTHO05D005216 4.4e-92 342.0 288 61.8
Rhsim09G0154800 Rhododendron simsii HOM05D003924 ORTHO05D005216 2.0e-89 333.2 335 57.9
SEGI_04277 Sequoiadendron giganteum HOM05D003924 ORTHO05D005216 5.5e-87 325.1 218 75.7
SEGI_05715 Sequoiadendron giganteum HOM05D003924 ORTHO05D005216 2.7e-86 322.8 218 75.2
ClCG09G020390 Citrullus lanatus HOM05D003924 ORTHO05D005216 3.1e-82 309.3 309 58.9
CBR_g19436 Chara braunii HOM05D003924 ORTHO05D005216 5.9e-73 278.5 296 52.4
Oeu055056.1 Olea europaea HOM05D003924 ORTHO05D005216 6.1e-62 241.9 223 60.5
Aqoxy298s005 Aquilegia oxysepala HOM05D003924 ORTHO05D005216 3.5e-49 199.5 138 68.8
SHI16918 Sapria himalayana HOM05D003924 ORTHO05D005216 2.7e-41 173.3 117 69.2
Psat1g019320 Pisum sativum HOM05D003924 ORTHO05D005216 1.4e-34 151.0 154 53.9
Cre17.g729250 Chlamydomonas reinhardtii HOM05D003924 ORTHO05D005216 9.3e-34 148.3 207 41.5
Oeu055057.1 Olea europaea HOM05D001574 ORTHO05D000708 5.6e-31 139.0 119 71.4
MCO07G242 Micromonas commoda HOM05D003924 ORTHO05D005216 3.1e-29 133.3 302 33.8
PRCOL_00005861 Prasinoderma coloniale HOM05D003924 ORTHO05D005216 2.6e-28 130.2 239 36.4
Prupe.3G086600 Prunus persica HOM05D003924 ORTHO05D005216 2.2e-19 100.5 100 58.0
AL879U10010 Arabidopsis lyrata HOM05D003924 ORTHO05D000708 3.5e-17 93.2 59 83.1
SHI16920 Sapria himalayana HOM05D003924 ORTHO05D002750 6.9e-13 79.0 46 84.8
AUR62023872 Chenopodium quinoa HOM05D003924 ORTHO05D000112 1.6e-09 67.8 45 71.1
SEGI_09139 Sequoiadendron giganteum HOM05D003924 ORTHO05D005216 3.0e-08 63.5 45 71.1
SEGI_15949 Sequoiadendron giganteum HOM05D003924 ORTHO05D005216 3.0e-08 63.5 45 71.1
SHI16914 Sapria himalayana HOM05D003924 ORTHO05D005216 3.3e-07 60.1 45 62.2
Hma1.2p1_3877F.1_g337870 Hydrangea macrophylla HOM05D003924 ORTHO05D228195 1.3e-06 58.2 53 62.3


User provided reference genes

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