Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000056g0060 Nicotiana tabacum HOM05D004601 ORTHO05D005806 0.0e+00 1274.6 643 100.0
Sopen07g006920 Solanum pennellii HOM05D004601 ORTHO05D005806 6.8e-271 937.2 638 77.0
CAN.G285.4 Capsicum annuum HOM05D004601 ORTHO05D005806 1.6e-248 862.8 577 76.4
Solyc07g018000.3 Solanum lycopersicum HOM05D004601 ORTHO05D005806 5.4e-236 821.2 563 76.4
Peaxi162Scf00231g01115 Petunia axillaris HOM05D004601 ORTHO05D005806 1.5e-217 760.0 563 71.2
Dinv25455 Davidia involucrata HOM05D004601 ORTHO05D005806 4.7e-171 605.5 673 51.1
Actinidia02499 Actinidia chinensis HOM05D004601 ORTHO05D005806 9.4e-164 581.3 643 51.0
Cc06_g20790 Coffea canephora HOM05D004601 ORTHO05D005806 4.7e-163 578.9 641 50.7
CSS0021444 Camellia sinensis var. sinensis HOM05D004601 ORTHO05D005806 5.6e-156 555.4 635 49.8
Migut.J00793 Erythranthe guttata HOM05D004601 ORTHO05D005806 1.6e-155 553.9 673 46.7
GSVIVG01029314001 Vitis vinifera HOM05D004601 ORTHO05D005806 3.4e-153 546.2 645 47.3
MSTRG.5939 Avicennia marina HOM05D004601 ORTHO05D005806 3.7e-152 542.7 691 45.2
Cfa013456 Carpinus fangiana HOM05D004601 ORTHO05D005806 6.4e-152 542.0 650 48.5
Ciclev10007283m.g Citrus clementina HOM05D004601 ORTHO05D005806 7.0e-151 538.5 649 48.7
Prupe.1G074600 Prunus persica HOM05D004601 ORTHO05D005806 4.6e-150 535.8 654 46.9
TWI63G1718 Tripterygium wilfordii HOM05D004601 ORTHO05D005806 2.3e-149 533.5 650 47.2
ECA236G0938 Erigeron canadensis HOM05D004601 ORTHO05D005806 3.9e-149 532.7 639 47.7
HanXRQChr05g0141031 Helianthus annuus HOM05D004601 ORTHO05D005806 3.9e-149 532.7 634 47.8
Gohir.A13G208300 Gossypium hirsutum HOM05D004601 ORTHO05D005806 5.6e-148 528.9 653 46.4
CiPaw.08G032200 Carya illinoinensis HOM05D004601 ORTHO05D005806 2.8e-147 526.6 648 47.7
Gorai.013G243100 Gossypium raimondii HOM05D004601 ORTHO05D005806 2.6e-145 520.0 653 45.9
MD16G1247900 Malus domestica HOM05D004601 ORTHO05D005806 7.5e-145 518.5 648 46.0
Thecc.09G186600 Theobroma cacao HOM05D004601 ORTHO05D005806 3.5e-142 509.6 682 44.4
RcHm_v2.0_Chr4g0399311 Rosa chinensis HOM05D004601 ORTHO05D005806 1.7e-141 507.3 638 45.8
Duzib150G1331 Durio zibethinus HOM05D004601 ORTHO05D005806 2.5e-140 503.4 679 44.0
Nn8g40736 Nelumbo nucifera HOM05D004601 ORTHO05D005806 2.8e-139 500.0 666 45.5
Potri.018G141900 Populus trichocarpa HOM05D004601 ORTHO05D005806 6.8e-138 495.4 532 50.9
Nitab4.5_0006199g0020 Nicotiana tabacum HOM05D004601 ORTHO05D005806 1.2e-137 494.6 310 84.5
FvH4_4g07160 Fragaria vesca HOM05D004601 ORTHO05D005806 3.4e-137 493.0 648 44.9
Glyma.15G166700 Glycine max HOM05D004601 ORTHO05D005806 3.7e-136 489.6 649 44.8
Phvul.009G235800 Phaseolus vulgaris HOM05D004601 ORTHO05D005806 6.4e-136 488.8 674 44.1
Sabra18G0116000 Salix brachista HOM05D004601 ORTHO05D005806 2.1e-134 483.8 548 49.1
FAN17G2239 Fragaria x ananassa HOM05D004601 ORTHO05D005806 6.6e-133 478.8 644 44.4
Lj6g0004756 Lotus japonicus HOM05D004601 ORTHO05D005806 6.6e-133 478.8 625 45.0
Gohir.D13G212700 Gossypium hirsutum HOM05D004601 ORTHO05D005806 1.5e-132 477.6 450 54.4
TPR.G7576 Trifolium pratense HOM05D004601 ORTHO05D000001 4.3e-132 476.1 635 44.7
Rhsim03G0267200 Rhododendron simsii HOM05D004601 ORTHO05D005806 5.6e-132 475.7 663 44.8
vmacro05994 Vaccinium macrocarpon HOM05D004601 ORTHO05D005806 2.1e-131 473.8 651 45.3
Aqoxy7G02847 Aquilegia oxysepala HOM05D004601 ORTHO05D005806 3.6e-131 473.0 649 44.5
Ca_02111_v3 Cicer arietinum L. HOM05D004601 ORTHO05D005806 4.7e-131 472.6 661 43.9
Hma1.2p1_0235F.1_g098690 Hydrangea macrophylla HOM05D004601 ORTHO05D005806 6.2e-131 472.2 528 50.0
Psat1g144400 Pisum sativum HOM05D004601 ORTHO05D005806 6.2e-131 472.2 649 44.1
EL10Ac4g10170 Beta vulgaris HOM05D004601 ORTHO05D005806 8.1e-131 471.9 659 43.4
VMungo1309G1314 Vigna mungo HOM05D004601 ORTHO05D005806 1.8e-130 470.7 638 44.2
Lalb_Chr08g0231931 Lupinus albus HOM05D004601 ORTHO05D005806 4.0e-130 469.5 656 42.7
Sc16g0011160 Simmondsia chinensis HOM05D004601 ORTHO05D005806 3.4e-129 466.5 655 44.0
Cpa.g.sc95.10 Carica papaya HOM05D004601 ORTHO05D005806 7.1e-127 458.8 509 50.3
PGR142G4125 Punica granatum HOM05D004601 ORTHO05D005806 1.2e-126 458.0 661 42.5
Lsat_1_v5_gn_8_69120 Lactuca sativa HOM05D004601 ORTHO05D005806 2.7e-126 456.8 642 43.3
PGR142G2375 Punica granatum HOM05D004601 ORTHO05D005806 6.0e-126 455.7 661 42.4
arahy.Tifrunner.gnm1.ann1.BQ8TF8 Arachis hypogaea HOM05D004601 ORTHO05D005806 2.5e-124 450.3 644 42.5
Carub.0008s1767 Capsella rubella HOM05D004601 ORTHO05D005806 2.1e-123 447.2 679 40.6
CANSAT11G0507 Cannabis sativa HOM05D004601 ORTHO05D005806 3.6e-123 446.4 694 39.2
CARHR270950 Cardamine hirsuta HOM05D004601 ORTHO05D005806 8.1e-123 445.3 662 40.2
THA.LOC104817773 Tarenaya hassleriana HOM05D004601 ORTHO05D005806 8.1e-123 445.3 675 41.8
PSO170G3696 Papaver somniferum HOM05D004601 ORTHO05D005806 1.4e-122 444.5 657 41.9
Eucgr.C00108 Eucalyptus grandis HOM05D004601 ORTHO05D005806 5.2e-122 442.6 635 43.3
A10p14520 Brassica napus HOM05D004601 ORTHO05D005806 6.8e-122 442.2 420 53.3
BcaC04g19998 Brassica carinata HOM05D004601 ORTHO05D005806 8.9e-122 441.8 420 52.6
PSO063G2966 Papaver somniferum HOM05D004601 ORTHO05D005806 8.9e-122 441.8 588 45.1
AL8G33090 Arabidopsis lyrata HOM05D004601 ORTHO05D005806 3.4e-121 439.9 526 46.6
Thhalv10012474m.g Eutrema salsugineum HOM05D004601 ORTHO05D005806 5.8e-121 439.1 671 41.7
BraA10t43541Z Brassica rapa HOM05D004601 ORTHO05D005806 1.3e-120 438.0 667 40.6
Sed0026596 Sechium edule HOM05D004601 ORTHO05D005806 3.8e-120 436.4 698 40.5
Sp6g18890 Schrenkiella parvula HOM05D004601 ORTHO05D005806 8.4e-120 435.3 679 40.4
AT5G57160 Arabidopsis thaliana HOM05D004601 ORTHO05D005806 5.4e-119 432.6 526 45.8
BolC9t57749H Brassica oleracea HOM05D004601 ORTHO05D005806 1.2e-118 431.4 648 41.4
BcaC04g19995 Brassica carinata HOM05D004601 ORTHO05D005806 2.1e-118 430.6 694 40.2
C09p48970 Brassica napus HOM05D004601 ORTHO05D005806 4.6e-118 429.5 694 40.1
CsaV3_2G008760 Cucumis sativus L. HOM05D004601 ORTHO05D005806 3.0e-117 426.8 675 40.3
Manes.14G159112 Manihot esculenta HOM05D004601 ORTHO05D005806 1.1e-116 424.9 368 56.2
MELO3C003972.2 Cucumis melo HOM05D004601 ORTHO05D005806 2.5e-116 423.7 525 46.3
FAN12G1367 Fragaria x ananassa HOM05D004601 ORTHO05D005806 4.3e-116 422.9 635 41.4
AUR62039835 Chenopodium quinoa HOM05D004601 ORTHO05D005806 1.3e-115 421.4 544 46.0
Ah.06g194430 Amaranthus hybridus HOM05D004601 ORTHO05D005806 2.1e-115 420.6 518 45.9
AUR62000175 Chenopodium quinoa HOM05D004601 ORTHO05D005806 3.2e-111 406.8 596 42.3
CDE07G0894 Ceratophyllum demersum HOM05D004601 ORTHO05D005806 1.6e-110 404.4 642 39.6
Medtr2g038030 Medicago truncatula HOM05D004601 ORTHO05D005806 3.9e-109 399.8 363 54.8
FAN22G2150 Fragaria x ananassa HOM05D004601 ORTHO05D005806 5.1e-109 399.4 522 43.7
SalBow6G1386 Salvia bowleyana HOM05D004601 ORTHO05D005806 1.9e-108 397.5 621 40.3
MBI16_g47869_MAGBIO Magnolia biondii HOM05D004601 ORTHO05D005806 1.3e-107 394.8 364 56.0
Aa31LG3G13060 Aethionema arabicum HOM05D004601 ORTHO05D005806 1.5e-105 387.9 666 38.9
HPP92_021964 Vanilla planifolia HOM05D004601 ORTHO05D005806 2.6e-105 387.1 636 39.2
COL.COLO4_06398 Corchorus olitorius HOM05D004601 ORTHO05D005806 2.9e-104 383.6 660 37.9
SGA_v2.0_scaffold112G31593 Striga asiatica HOM05D004601 ORTHO05D005806 3.5e-102 376.7 679 37.8
Zm00001eb071490 Zea mays HOM05D004601 ORTHO05D005806 1.8e-101 374.4 677 36.3
Glyma.09G060132 Glycine max HOM05D004601 ORTHO05D005806 1.5e-92 344.7 375 47.2
ClCG11G011720 Citrullus lanatus HOM05D004601 ORTHO05D005806 2.5e-92 344.0 706 34.6
Hma1.2p1_0235F.1_g098680 Hydrangea macrophylla HOM05D004601 ORTHO05D005806 3.1e-90 337.0 271 61.6
TAR383G0412 Trochodendron aralioides HOM05D004601 ORTHO05D005806 3.3e-84 317.0 271 59.4
Lj7A622G14 Lonicera japonica HOM05D004601 ORTHO05D005806 2.6e-81 307.4 369 48.5
SHI03064 Sapria himalayana HOM05D004601 ORTHO05D005806 7.7e-81 305.8 369 47.7
Aqoxy295s002 Aquilegia oxysepala HOM05D004601 ORTHO05D005806 1.8e-77 294.7 349 46.7
ATR0626G236 Amborella trichopoda HOM05D004601 ORTHO05D005806 3.0e-77 293.9 636 34.4
arahy.Tifrunner.gnm1.ann1.LL4FRQ Arachis hypogaea HOM05D004601 ORTHO05D005806 6.7e-77 292.7 526 37.3
Pp3c14_5920 Physcomitrium patens HOM05D004601 ORTHO05D005806 6.3e-75 286.2 468 36.5
BcaB08g35989 Brassica carinata HOM05D004601 ORTHO05D005806 6.7e-69 266.2 523 36.5
Atru.chr7.956 Acer truncatum HOM05D004601 ORTHO05D005806 3.1e-66 257.3 639 31.9
Mapoly0001s0137 Marchantia polymorpha HOM05D004601 ORTHO05D005806 8.5e-64 249.2 568 31.2
SEGI_28566 Sequoiadendron giganteum HOM05D004601 ORTHO05D005806 1.1e-63 248.8 267 50.6
AagrBONN_evm.TU.Sc2ySwM_228.1820 Anthoceros agrestis HOM05D004601 ORTHO05D005806 7.2e-63 246.1 321 43.3
DCAR_020147 Daucus carota HOM05D004601 ORTHO05D005806 2.4e-58 231.1 368 39.7
SMO144G0133 Selaginella moellendorffii HOM05D004601 ORTHO05D005806 1.6e-57 228.4 404 35.1
ECA236G2032 Erigeron canadensis HOM05D004601 ORTHO05D005806 2.0e-57 228.0 404 36.4
MBI16_g10345_MAGBIO Magnolia biondii HOM05D004601 ORTHO05D005806 1.3e-56 225.3 770 27.7
Oeu019558.1 Olea europaea HOM05D004601 ORTHO05D005806 5.2e-45 186.8 149 65.1
Psat5g051520 Pisum sativum HOM05D004601 ORTHO05D005806 1.3e-43 182.2 175 53.7
arahy.Tifrunner.gnm1.ann1.8TE3EA Arachis hypogaea HOM05D004601 ORTHO05D005806 1.2e-38 165.6 149 59.7
AagrBONN_evm.TU.Sc2ySwM_228.3225 Anthoceros agrestis HOM05D004601 ORTHO05D005806 1.9e-26 125.2 410 26.1
Aqoxy295s003 Aquilegia oxysepala HOM05D004601 ORTHO05D005806 4.7e-22 110.5 91 61.5
Rhsim01G0115200 Rhododendron simsii HOM05D004601 ORTHO05D005806 4.7e-22 110.5 274 32.8
RhsimUnG0137600 Rhododendron simsii HOM05D004601 ORTHO05D005806 5.2e-21 107.1 135 48.1
SalBow7G2616 Salvia bowleyana HOM05D005568 ORTHO05D006940 3.7e-19 100.9 63 71.4
Psat3g171960 Pisum sativum HOM05D003643 ORTHO05D005001 1.9e-18 98.6 67 61.2
CBR_g50206 Chara braunii HOM05D000019 ORTHO05D000048 4.6e-17 94.0 415 25.3
PRCOL_00001076 Prasinoderma coloniale HOM05D004601 ORTHO05D005806 1.2e-14 85.9 478 22.8
CAN.G285.5 Capsicum annuum HOM05D004601 ORTHO05D005806 1.1e-13 82.8 45 84.4
Cre10.g433550 Chlamydomonas reinhardtii HOM05D004601 ORTHO05D005806 1.7e-11 75.5 56 57.1
Solyc07g017990.3 Solanum lycopersicum HOM05D004601 ORTHO05D005806 9.2e-10 69.7 32 93.8
Peaxi162Scf00231g01116 Petunia axillaris HOM05D004601 ORTHO05D005806 4.6e-09 67.4 30 96.7


User provided reference genes

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