Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000008g0610 Nicotiana tabacum HOM05D004933 ORTHO05D005465 2.6e-77 292.0 148 100.0
Nitab4.5_0006356g0010 Nicotiana tabacum HOM05D004933 ORTHO05D005465 3.5e-45 185.3 264 47.7
Sopen03g025610 Solanum pennellii HOM05D004933 ORTHO05D005465 2.4e-38 162.5 262 43.5
Nitab4.5_0000171g0230 Nicotiana tabacum HOM05D004933 ORTHO05D005465 1.2e-34 150.2 204 48.5
Solyc03g095690.3 Solanum lycopersicum HOM05D004933 ORTHO05D005465 9.2e-30 134.0 204 44.6
Phvul.008G186300 Phaseolus vulgaris HOM05D004933 ORTHO05D005465 2.8e-26 122.5 254 37.0
Lalb_Chr17g0344711 Lupinus albus HOM05D004933 ORTHO05D005465 1.4e-25 120.2 248 36.7
Cc02_g05220 Coffea canephora HOM05D004933 ORTHO05D005465 1.8e-25 119.8 259 36.3
VMungo0647G0473 Vigna mungo HOM05D004933 ORTHO05D005465 1.8e-25 119.8 256 36.3
Potri.019G060900 Populus trichocarpa HOM05D004933 ORTHO05D005465 3.1e-25 119.0 257 35.8
Oeu064000.1 Olea europaea HOM05D004933 ORTHO05D005465 4.0e-25 118.6 249 35.7
Actinidia13639 Actinidia chinensis HOM05D004933 ORTHO05D005465 6.8e-25 117.9 262 35.5
Nn2g10269 Nelumbo nucifera HOM05D004933 ORTHO05D005465 6.8e-25 117.9 266 35.0
Rhsim03G0153500 Rhododendron simsii HOM05D004933 ORTHO05D005465 6.8e-25 117.9 268 35.4
Peaxi162Scf00073g02324 Petunia axillaris HOM05D004933 ORTHO05D005465 8.9e-25 117.5 194 42.3
QL08p065069 Quercus lobata HOM05D004933 ORTHO05D005465 1.2e-24 117.1 259 36.3
CsaV3_6G002390 Cucumis sativus L. HOM05D004933 ORTHO05D005465 1.5e-24 116.7 260 35.8
Lj8C53G7 Lonicera japonica HOM05D004933 ORTHO05D005465 5.8e-24 114.8 257 35.8
Cfa001196 Carpinus fangiana HOM05D004933 ORTHO05D005465 9.8e-24 114.0 262 35.9
Manes.10G003100 Manihot esculenta HOM05D004933 ORTHO05D005465 9.8e-24 114.0 265 34.3
Atru.chr12.195 Acer truncatum HOM05D004933 ORTHO05D005465 1.7e-23 113.2 261 35.2
MELO3C020016.2 Cucumis melo HOM05D004933 ORTHO05D005465 1.7e-23 113.2 260 34.2
PSO170G4230 Papaver somniferum HOM05D004933 ORTHO05D005465 1.7e-23 113.2 243 36.2
SGA_v2.0_scaffold44G16628 Striga asiatica HOM05D004933 ORTHO05D005465 1.7e-23 113.2 237 37.6
Dinv21856 Davidia involucrata HOM05D004933 ORTHO05D005465 2.2e-23 112.8 253 35.6
ClCG11G005620 Citrullus lanatus HOM05D004933 ORTHO05D005465 2.9e-23 112.5 260 35.8
arahy.Tifrunner.gnm1.ann1.561PLB Arachis hypogaea HOM05D004933 ORTHO05D005465 3.7e-23 112.1 253 34.4
Glyma.02G219200 Glycine max HOM05D004933 ORTHO05D005465 3.7e-23 112.1 254 34.3
Ciclev10030489m.g Citrus clementina HOM05D004933 ORTHO05D005465 4.9e-23 111.7 261 34.1
LjContig00408g0012805 Lotus japonicus HOM05D004933 ORTHO05D005465 4.9e-23 111.7 254 35.4
TAR623G0849 Trochodendron aralioides HOM05D004933 ORTHO05D005465 4.9e-23 111.7 266 34.2
GSVIVG01032657001 Vitis vinifera HOM05D004933 ORTHO05D005465 4.9e-23 111.7 263 34.6
ECA238G2994 Erigeron canadensis HOM05D004933 ORTHO05D005465 6.4e-23 111.3 261 35.2
Psat2g061800 Pisum sativum HOM05D004933 ORTHO05D005465 6.4e-23 111.3 254 34.3
Eucgr.J00103 Eucalyptus grandis HOM05D004933 ORTHO05D005465 8.3e-23 110.9 255 34.9
Sed0014960 Sechium edule HOM05D004933 ORTHO05D005465 8.3e-23 110.9 260 34.2
Sabra19G0074700 Salix brachista HOM05D004933 ORTHO05D005465 1.1e-22 110.5 267 33.3
HanXRQChr14g0460551 Helianthus annuus HOM05D004933 ORTHO05D005465 1.4e-22 110.2 260 34.6
TPR.G33913 Trifolium pratense HOM05D004933 ORTHO05D005465 1.9e-22 109.8 254 34.6
Cpa.g.sc19.41 Carica papaya HOM05D004933 ORTHO05D005465 2.4e-22 109.4 259 34.7
CANSAT56G0526 Cannabis sativa HOM05D004933 ORTHO05D005465 4.1e-22 108.6 265 34.0
Medtr5g067980 Medicago truncatula HOM05D004933 ORTHO05D005465 4.1e-22 108.6 255 34.5
PSO017G2233 Papaver somniferum HOM05D004933 ORTHO05D005465 7.0e-22 107.8 249 34.5
BolC4t28354H Brassica oleracea HOM05D004933 ORTHO05D005465 1.2e-21 107.1 228 35.1
Sc11g0006050 Simmondsia chinensis HOM05D004933 ORTHO05D005465 1.2e-21 107.1 263 34.6
Thecc.10G184900 Theobroma cacao HOM05D004933 ORTHO05D005465 1.2e-21 107.1 262 34.7
Aqoxy4G03277 Aquilegia oxysepala HOM05D004933 ORTHO05D005465 2.1e-21 106.3 267 33.0
BraA04t18570Z Brassica rapa HOM05D004933 ORTHO05D005465 2.1e-21 106.3 228 34.6
A04p31150 Brassica napus HOM05D004933 ORTHO05D005465 2.7e-21 105.9 228 34.6
C04p68550 Brassica napus HOM05D004933 ORTHO05D005465 2.7e-21 105.9 228 34.2
RcHm_v2.0_Chr1g0372551 Rosa chinensis HOM05D004933 ORTHO05D005465 4.6e-21 105.1 260 33.8
AT2G40770 Arabidopsis thaliana HOM05D004933 ORTHO05D005465 6.0e-21 104.8 253 35.6
THA.LOC104824249 Tarenaya hassleriana HOM05D004933 ORTHO05D005465 6.0e-21 104.8 252 34.9
TWI09G0099 Tripterygium wilfordii HOM05D004933 ORTHO05D005465 6.0e-21 104.8 260 34.6
Aa31LG3G1370 Aethionema arabicum HOM05D004933 ORTHO05D005465 1.3e-20 103.6 246 34.6
AL4G38660 Arabidopsis lyrata HOM05D004933 ORTHO05D005465 1.7e-20 103.2 239 35.6
Potri.019G060000 Populus trichocarpa HOM05D004933 ORTHO05D005465 1.7e-20 103.2 205 36.6
Potri.019G060126 Populus trichocarpa HOM05D004933 ORTHO05D005465 1.7e-20 103.2 205 36.6
AUR62030592 Chenopodium quinoa HOM05D004933 ORTHO05D005465 3.0e-20 102.4 257 33.9
MD01G1169300 Malus domestica HOM05D004933 ORTHO05D005465 3.0e-20 102.4 246 34.1
Hma1.2p1_1805F.1_g303160 Hydrangea macrophylla HOM05D004933 ORTHO05D005465 1.5e-19 100.1 249 34.1
Hma1.2p1_1805F.1_g303170 Hydrangea macrophylla HOM05D004933 ORTHO05D005465 1.5e-19 100.1 249 34.1
Carub.0004s2307 Capsella rubella HOM05D004933 ORTHO05D005465 1.9e-19 99.8 218 36.7
Migut.F00567 Erythranthe guttata HOM05D004933 ORTHO05D005465 2.5e-19 99.4 246 35.0
Thhalv10016132m.g Eutrema salsugineum HOM05D004933 ORTHO05D005465 2.5e-19 99.4 238 33.2
PGR044G2398 Punica granatum HOM05D004933 ORTHO05D005465 2.5e-19 99.4 263 31.6
AUR62024946 Chenopodium quinoa HOM05D004933 ORTHO05D005465 3.3e-19 99.0 257 32.7
DCAR_014660 Daucus carota HOM05D004933 ORTHO05D005465 3.3e-19 99.0 244 33.2
unitig_0.g1674 Utricularia gibba HOM05D004933 ORTHO05D005465 3.3e-19 99.0 200 37.0
MBI15_g39394_MAGBIO Magnolia biondii HOM05D004933 ORTHO05D005465 4.3e-19 98.6 261 32.6
CDE04G1441 Ceratophyllum demersum HOM05D004933 ORTHO05D005465 1.2e-18 97.1 207 36.2
Duzib106G0698 Durio zibethinus HOM05D004933 ORTHO05D005465 1.2e-18 97.1 262 32.8
arahy.Tifrunner.gnm1.ann1.LX8ZS6 Arachis hypogaea HOM05D004933 ORTHO05D005465 2.1e-18 96.3 285 30.5
Gohir.A10G177700 Gossypium hirsutum HOM05D004933 ORTHO05D005465 2.1e-18 96.3 259 32.8
CSS0031284 Camellia sinensis var. sinensis HOM05D004933 ORTHO05D005465 2.8e-18 95.9 219 33.8
Prupe.2G265500 Prunus persica HOM05D004933 ORTHO05D005465 4.7e-18 95.1 261 31.8
FvH4_7g26110 Fragaria vesca HOM05D004933 ORTHO05D005465 1.1e-17 94.0 260 30.4
Sp4g23090 Schrenkiella parvula HOM05D004933 ORTHO05D005465 1.1e-17 94.0 217 34.6
Gohir.D10G184300 Gossypium hirsutum HOM05D004933 ORTHO05D005465 1.8e-17 93.2 259 32.4
Gorai.011G206500 Gossypium raimondii HOM05D004933 ORTHO05D005465 1.8e-17 93.2 259 32.4
HPP92_012544 Vanilla planifolia HOM05D004933 ORTHO05D005465 1.8e-17 93.2 261 30.3
Lsat_1_v5_gn_2_126780 Lactuca sativa HOM05D004933 ORTHO05D005465 6.8e-17 91.3 248 33.5
Ah.12g064450 Amaranthus hybridus HOM05D004933 ORTHO05D005465 8.9e-17 90.9 255 30.2
FAN06G3663 Fragaria x ananassa HOM05D004933 ORTHO05D005465 8.9e-17 90.9 261 29.9
ATR1127G041 Amborella trichopoda HOM05D004933 ORTHO05D005465 1.2e-16 90.5 247 32.4
CARHR135870 Cardamine hirsuta HOM05D004933 ORTHO05D005465 1.5e-16 90.1 210 35.2
vmacro06901 Vaccinium macrocarpon HOM05D004933 ORTHO05D005465 3.4e-16 89.0 252 32.1
Haze_17369 Corylus avellana HOM05D004933 ORTHO05D005465 5.8e-16 88.2 172 39.0
Ca_05521_v3 Cicer arietinum L. HOM05D004933 ORTHO05D005465 7.5e-16 87.8 151 43.0
Potri.019G060300 Populus trichocarpa HOM05D004933 ORTHO05D005465 9.9e-16 87.4 196 34.7
Hund13438 Selenicereus undatus HOM05D004933 ORTHO05D005465 9.9e-16 87.4 251 29.9
SalBow3G2275 Salvia bowleyana HOM05D004933 ORTHO05D005465 1.4e-14 83.6 152 37.5
Potri.019G060210 Populus trichocarpa HOM05D004933 ORTHO05D005465 2.4e-14 82.8 100 49.0
Zm00001eb330720 Zea mays HOM05D004933 ORTHO05D005465 1.2e-13 80.5 242 30.6
CAN.G1229.10 Capsicum annuum HOM05D004933 ORTHO05D005465 1.3e-12 77.0 113 46.9
Os07g0680500 Oryza sativa ssp. japonica HOM05D004933 ORTHO05D005465 2.5e-11 72.8 150 34.0
AagrBONN_evm.TU.Sc2ySwM_344.3336 Anthoceros agrestis HOM05D004933 ORTHO05D005465 9.5e-11 70.9 246 28.5
SMO361G0619 Selaginella moellendorffii HOM05D004933 ORTHO05D005465 1.6e-10 70.1 232 28.0
SEGI_41016 Sequoiadendron giganteum HOM05D004933 ORTHO05D005465 8.1e-10 67.8 143 35.0
SMO361G0687 Selaginella moellendorffii HOM05D004933 ORTHO05D005465 2.4e-09 66.2 240 26.7
EL10Ac2g02668 Beta vulgaris HOM05D004933 ORTHO05D005465 8.9e-09 64.3 263 28.5
Solyc03g095680.2 Solanum lycopersicum HOM05D004933 ORTHO05D005465 3.4e-08 62.4 39 74.4
Peaxi162Scf00073g02333 Petunia axillaris HOM05D004933 ORTHO05D005465 9.9e-08 60.8 39 71.8
Pp3c18_13500 Physcomitrium patens HOM05D004933 ORTHO05D005465 6.4e-07 58.2 219 26.9
SMO199G0099 Selaginella moellendorffii HOM05D000515 ORTHO05D005465 1.9e-06 56.6 40 62.5
Mapoly0021s0042 Marchantia polymorpha HOM05D004933 ORTHO05D005465 5.4e-06 55.1 208 25.5


User provided reference genes

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