Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000001g0170 Nicotiana tabacum HOM05D007322 ORTHO05D009029 1.3e-133 479.9 284 100.0
CAN.G1021.1 Capsicum annuum HOM05D007322 ORTHO05D009029 1.1e-66 257.7 201 83.6
Peaxi162Scf00152g01436 Petunia axillaris HOM05D007322 ORTHO05D009029 1.8e-58 230.3 241 68.9
CSS0017191 Camellia sinensis var. sinensis HOM05D007322 ORTHO05D009029 5.3e-58 228.8 252 61.9
Solyc11g040260.2 Solanum lycopersicum HOM05D007322 ORTHO05D009029 5.8e-57 225.3 257 65.4
Sopen11g018100 Solanum pennellii HOM05D007322 ORTHO05D009029 5.8e-57 225.3 257 65.4
Dinv24285 Davidia involucrata HOM05D007322 ORTHO05D009029 7.6e-57 224.9 252 61.5
Nitab4.5_0003788g0010 Nicotiana tabacum HOM05D007322 ORTHO05D009029 6.4e-56 221.9 150 96.0
QL10p025368 Quercus lobata HOM05D007322 ORTHO05D009029 1.2e-54 217.6 253 58.9
Prupe.1G569600 Prunus persica HOM05D007322 ORTHO05D009029 2.1e-54 216.9 226 61.9
GSVIVG01022920001 Vitis vinifera HOM05D007322 ORTHO05D009029 6.6e-53 211.8 265 57.7
MD15G1423900 Malus domestica HOM05D007322 ORTHO05D009029 8.7e-53 211.5 221 62.0
RcHm_v2.0_Chr7g0222211 Rosa chinensis HOM05D007322 ORTHO05D009029 1.5e-52 210.7 213 65.3
Duzib132G0092 Durio zibethinus HOM05D007322 ORTHO05D009029 5.6e-52 208.8 246 57.3
HanXRQChr10g0290611 Helianthus annuus HOM05D007322 ORTHO05D009029 5.6e-52 208.8 224 62.1
TWI14G1121 Tripterygium wilfordii HOM05D007322 ORTHO05D009029 1.6e-51 207.2 252 57.5
Hma1.2p1_0217F.1_g092060 Hydrangea macrophylla HOM05D007322 ORTHO05D009029 3.1e-50 203.0 210 59.0
Lsat_1_v5_gn_5_105200 Lactuca sativa HOM05D007322 ORTHO05D009029 5.3e-50 202.2 246 57.3
FvH4_5g29340 Fragaria vesca HOM05D007322 ORTHO05D009029 6.9e-50 201.8 211 64.0
Potri.003G019000 Populus trichocarpa HOM05D007322 ORTHO05D009029 6.9e-50 201.8 205 63.4
FAN18G2556 Fragaria x ananassa HOM05D007322 ORTHO05D009029 9.0e-50 201.4 211 64.0
Hund12986 Selenicereus undatus HOM05D007322 ORTHO05D009029 1.5e-49 200.7 276 52.5
FAN04G1727 Fragaria x ananassa HOM05D001260 ORTHO05D002424 2.6e-49 199.9 211 63.5
Migut.B00834 Erythranthe guttata HOM05D007322 ORTHO05D009029 3.4e-49 199.5 210 62.9
CARHR011130 Cardamine hirsuta HOM05D007322 ORTHO05D009029 4.5e-49 199.1 227 61.7
PGR042G2216 Punica granatum HOM05D007322 ORTHO05D009029 4.5e-49 199.1 210 61.9
Thhalv10007006m.g Eutrema salsugineum HOM05D007322 ORTHO05D009029 1.3e-48 197.6 226 58.8
Sabra03G0010600 Salix brachista HOM05D007322 ORTHO05D009029 3.8e-48 196.1 205 62.4
arahy.Tifrunner.gnm1.ann1.BYDN2S Arachis hypogaea HOM05D007322 ORTHO05D009029 2.4e-47 193.4 233 48.1
arahy.Tifrunner.gnm1.ann1.YY4I9I Arachis hypogaea HOM05D007322 ORTHO05D009029 2.4e-47 193.4 233 48.1
Potri.001G211300 Populus trichocarpa HOM05D007322 ORTHO05D009029 3.2e-47 193.0 211 59.2
AT1G10910 Arabidopsis thaliana HOM05D007322 ORTHO05D009029 4.2e-47 192.6 244 58.2
THA.LOC104816934 Tarenaya hassleriana HOM05D007322 ORTHO05D009029 2.7e-46 189.9 216 58.3
BcaC05g24974 Brassica carinata HOM05D007322 ORTHO05D009029 4.6e-46 189.1 265 45.3
Sed0025924 Sechium edule HOM05D007322 ORTHO05D009029 4.6e-46 189.1 212 59.9
CDE05G1655 Ceratophyllum demersum HOM05D007322 ORTHO05D009029 7.9e-46 188.3 251 43.8
Cc02_g22530 Coffea canephora HOM05D007322 ORTHO05D009029 1.0e-45 188.0 201 64.2
Sp1g09630 Schrenkiella parvula HOM05D007322 ORTHO05D009029 1.3e-45 187.6 248 46.8
Rhsim01G0008000 Rhododendron simsii HOM05D007322 ORTHO05D009029 2.3e-45 186.8 243 56.4
A06p07690 Brassica napus HOM05D007322 ORTHO05D009029 3.9e-45 186.0 222 54.1
C05p09280 Brassica napus HOM05D007322 ORTHO05D009029 3.9e-45 186.0 222 54.1
BraA06t23970Z Brassica rapa HOM05D007322 ORTHO05D009029 8.7e-45 184.9 222 48.6
BcaNung04765 Brassica carinata HOM05D007322 ORTHO05D009029 1.1e-44 184.5 222 49.1
BolC5t29668H Brassica oleracea HOM05D007322 ORTHO05D009029 1.5e-44 184.1 212 55.2
Medtr2g007030 Medicago truncatula HOM05D007322 ORTHO05D009029 2.5e-44 183.3 239 43.9
Oeu008898.1 Olea europaea HOM05D007322 ORTHO05D009029 1.3e-43 181.0 231 57.1
Thecc.02G087000 Theobroma cacao HOM05D007322 ORTHO05D009029 2.1e-43 180.3 231 57.1
CsaV3_3G043150 Cucumis sativus L. HOM05D007322 ORTHO05D009029 2.8e-43 179.9 238 51.7
Glyma.08G186600 Glycine max HOM05D007322 ORTHO05D009029 2.8e-43 179.9 258 50.8
Carub.0001s1049 Capsella rubella HOM05D007322 ORTHO05D009029 3.7e-43 179.5 242 55.0
Ah.03g137110 Amaranthus hybridus HOM05D007322 ORTHO05D009029 8.1e-43 178.3 219 57.1
VMungo0540G0689 Vigna mungo HOM05D007322 ORTHO05D009029 8.1e-43 178.3 256 51.6
MELO3C026617.2 Cucumis melo HOM05D007322 ORTHO05D009029 1.4e-42 177.6 238 51.3
Lalb_Chr20g0123451 Lupinus albus HOM05D007322 ORTHO05D009029 1.8e-42 177.2 215 54.0
CiPaw.05G044700 Carya illinoinensis HOM05D007322 ORTHO05D009029 6.9e-42 175.3 180 63.9
HPP92_009152 Vanilla planifolia HOM05D007322 ORTHO05D009029 2.0e-41 173.7 272 47.8
Aa31LG1G3950 Aethionema arabicum HOM05D007322 ORTHO05D009029 4.5e-41 172.6 242 52.9
Lj6g0009763 Lotus japonicus HOM05D007322 ORTHO05D009029 2.9e-40 169.9 248 51.2
Cfa005519 Carpinus fangiana HOM05D007322 ORTHO05D009029 3.8e-40 169.5 210 57.1
COL.COLO4_11791 Corchorus olitorius HOM05D007322 ORTHO05D009029 8.4e-40 168.3 232 53.0
Atru.chr6.627 Acer truncatum HOM05D007322 ORTHO05D009029 2.5e-39 166.8 165 65.5
MSTRG.20302 Avicennia marina HOM05D007322 ORTHO05D009029 5.5e-39 165.6 225 53.8
Gohir.D02G214700 Gossypium hirsutum HOM05D007322 ORTHO05D009029 9.3e-39 164.9 232 53.4
Gorai.005G242500 Gossypium raimondii HOM05D007322 ORTHO05D009029 9.3e-39 164.9 232 53.4
TAR381G0036 Trochodendron aralioides HOM05D007322 ORTHO05D009029 9.3e-39 164.9 253 51.0
Nn5g28260 Nelumbo nucifera HOM05D007322 ORTHO05D009029 2.7e-38 163.3 148 58.8
EL10Ac6g14069 Beta vulgaris HOM05D007322 ORTHO05D009029 4.6e-38 162.5 236 52.1
Psat1g220200 Pisum sativum HOM05D007322 ORTHO05D009029 4.6e-38 162.5 252 49.6
Ciclev10000525m.g Citrus clementina HOM05D007322 ORTHO05D009029 6.0e-38 162.2 152 56.6
AL1G21890 Arabidopsis lyrata HOM05D007322 ORTHO05D009029 1.8e-37 160.6 160 67.5
MBI04_g34119_MAGBIO Magnolia biondii HOM05D007322 ORTHO05D009029 1.8e-37 160.6 238 50.8
ATR0026G013 Amborella trichopoda HOM05D007322 ORTHO05D009029 1.1e-36 157.9 200 56.0
TPR.G2112 Trifolium pratense HOM05D007322 ORTHO05D009029 1.5e-36 157.5 253 48.2
Gohir.A03G193600 Gossypium hirsutum HOM05D007322 ORTHO05D009029 3.3e-36 156.4 224 51.8
SGA_v2.0_scaffold110G31316 Striga asiatica HOM05D007322 ORTHO05D009029 7.4e-36 155.2 171 63.2
DCAR_025359 Daucus carota HOM05D007322 ORTHO05D009029 1.1e-34 151.4 151 66.2
vmacro19889 Vaccinium macrocarpon HOM05D007322 ORTHO05D009029 2.4e-34 150.2 151 66.2
Actinidia26149 Actinidia chinensis HOM05D007322 ORTHO05D009029 3.1e-34 149.8 145 69.0
Lj9C305T7 Lonicera japonica HOM05D007322 ORTHO05D009029 9.0e-34 148.3 241 49.8
Zm00001eb162220 Zea mays HOM05D007322 ORTHO05D009029 3.4e-33 146.4 191 55.0
ECA234G4037 Erigeron canadensis HOM05D007322 ORTHO05D009029 6.5e-32 142.1 154 64.9
Aqoxy6G00206 Aquilegia oxysepala HOM05D007322 ORTHO05D009029 1.4e-31 141.0 224 50.0
Manes.07G016500 Manihot esculenta HOM05D007322 ORTHO05D009029 1.4e-31 141.0 150 62.7
Os01g0559500 Oryza sativa ssp. japonica HOM05D007322 ORTHO05D009029 1.6e-30 137.5 190 51.1
Phvul.006G214900 Phaseolus vulgaris HOM05D007322 ORTHO05D009029 2.8e-27 126.7 157 59.2
Sc06g0002720 Simmondsia chinensis HOM05D007322 ORTHO05D009029 6.1e-22 109.0 118 68.6
Cpa.g.c42393 Carica papaya HOM05D007322 ORTHO05D009029 4.2e-15 86.3 102 50.0
Cpa.g.c31488 Carica papaya HOM05D007322 ORTHO05D009029 7.7e-09 65.5 77 41.6
Cc11_g03820 Coffea canephora HOM05D006106 ORTHO05D015839 1.3e-08 64.7 160 26.2
CDE05G3586 Ceratophyllum demersum HOM05D000602 ORTHO05D009029 8.5e-08 62.0 84 41.7
Pp3c24_4430 Physcomitrium patens HOM05D007322 ORTHO05D009029 1.9e-07 60.8 127 29.1
Mapoly0048s0090 Marchantia polymorpha HOM05D006705 ORTHO05D008179 7.2e-07 58.9 209 24.9
Cc00_g34390 Coffea canephora HOM05D006106 ORTHO05D007662 1.2e-06 58.2 134 27.6
CSS0047930 Camellia sinensis var. sinensis HOM05D006106 ORTHO05D007662 2.1e-06 57.4 119 29.4
SMO114G0119 Selaginella moellendorffii HOM05D000001 ORTHO05D375854 2.7e-06 57.0 188 26.6
ATR0737G117 Amborella trichopoda HOM05D005607 ORTHO05D008142 8.0e-06 55.5 144 24.3
Nn1g07642 Nelumbo nucifera HOM05D000001 ORTHO05D000003 8.0e-06 55.5 170 23.5


User provided reference genes

Program Settings