Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01863 Erythranthe guttata HOM05D005980 ORTHO05D007618 6.5e-304 1046.6 529 100.0
MSTRG.16268 Avicennia marina HOM05D005980 ORTHO05D007618 9.0e-221 770.4 539 74.4
Oeu032723.1 Olea europaea HOM05D005980 ORTHO05D007618 5.0e-219 764.6 535 73.5
CSS0019737 Camellia sinensis var. sinensis HOM05D005980 ORTHO05D007618 5.5e-210 734.6 537 70.6
CSS0007144 Camellia sinensis var. sinensis HOM05D005980 ORTHO05D007618 4.4e-207 724.9 537 70.0
SalBow8G1809 Salvia bowleyana HOM05D005980 ORTHO05D007618 4.4e-207 724.9 539 71.1
Nitab4.5_0000869g0050 Nicotiana tabacum HOM05D005980 ORTHO05D007618 7.4e-207 724.2 535 70.7
Actinidia13438 Actinidia chinensis HOM05D005980 ORTHO05D007618 3.1e-205 718.8 542 69.6
Solyc02g070390.3 Solanum lycopersicum HOM05D005980 ORTHO05D007618 1.4e-202 709.9 534 69.7
Sopen02g019470 Solanum pennellii HOM05D005980 ORTHO05D007618 3.2e-202 708.8 534 69.5
PGSC0003DMG402021097 Solanum tuberosum HOM05D005980 ORTHO05D007618 1.2e-201 706.8 534 69.3
SGA_v2.0_scaffold51G18642 Striga asiatica HOM05D005980 ORTHO05D007618 1.8e-200 703.0 541 69.5
Peaxi162Scf00670g00346 Petunia axillaris HOM05D005980 ORTHO05D007618 1.1e-197 693.7 478 73.8
Hma1.2p1_0586F.1_g183830 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 1.2e-196 690.3 469 75.3
Prupe.4G086000 Prunus persica HOM05D005980 ORTHO05D007618 2.0e-196 689.5 538 67.5
Dinv21517 Davidia involucrata HOM05D005980 ORTHO05D007618 2.6e-196 689.1 532 67.5
Eucgr.D00262 Eucalyptus grandis HOM05D005980 ORTHO05D007618 7.7e-196 687.6 560 66.6
FvH4_3g05000 Fragaria vesca HOM05D005980 ORTHO05D007618 1.0e-195 687.2 559 65.3
GSVIVG01021555001 Vitis vinifera HOM05D005980 ORTHO05D007618 6.5e-195 684.5 516 69.2
RcHm_v2.0_Chr5g0014971 Rosa chinensis HOM05D005980 ORTHO05D007618 1.1e-194 683.7 557 65.4
DCAR_003883 Daucus carota HOM05D005980 ORTHO05D007618 2.5e-194 682.6 478 71.5
Nn3g20318 Nelumbo nucifera HOM05D005980 ORTHO05D007618 4.2e-194 681.8 539 67.5
QL05p054997 Quercus lobata HOM05D005980 ORTHO05D007618 4.2e-194 681.8 537 67.2
CiPaw.09G119300 Carya illinoinensis HOM05D005980 ORTHO05D007618 3.6e-193 678.7 537 66.7
Cc09_g08730 Coffea canephora HOM05D005980 ORTHO05D007618 3.6e-193 678.7 531 66.5
FAN11G3650 Fragaria x ananassa HOM05D005980 ORTHO05D007618 4.7e-193 678.3 566 64.3
FAN21G1725 Fragaria x ananassa HOM05D005980 ORTHO05D007618 1.8e-192 676.4 567 64.0
Ciclev10014878m.g Citrus clementina HOM05D005980 ORTHO05D007618 5.2e-192 674.9 538 65.4
MD10G1257800 Malus domestica HOM05D005980 ORTHO05D007618 2.6e-191 672.5 540 66.1
PGR102G3344 Punica granatum HOM05D005980 ORTHO05D007618 5.7e-191 671.4 553 65.5
CsaV3_6G052070 Cucumis sativus L. HOM05D005980 ORTHO05D007618 7.5e-191 671.0 540 65.4
FAN16G3332 Fragaria x ananassa HOM05D005980 ORTHO05D007618 2.8e-190 669.1 505 69.1
Haze_05690 Corylus avellana HOM05D005980 ORTHO05D007618 4.8e-190 668.3 595 62.0
Thecc.06G143900 Theobroma cacao HOM05D005980 ORTHO05D007618 6.3e-190 667.9 536 67.5
ClCG01G024920 Citrullus lanatus HOM05D005980 ORTHO05D007618 1.4e-189 666.8 542 64.9
Nitab4.5_0005963g0020 Nicotiana tabacum HOM05D005980 ORTHO05D007618 4.1e-189 665.2 535 66.4
MELO3C007103.2 Cucumis melo HOM05D005980 ORTHO05D007618 2.0e-188 662.9 560 63.6
TAR626G0855 Trochodendron aralioides HOM05D005980 ORTHO05D007618 4.5e-188 661.8 540 65.6
AUR62025366 Chenopodium quinoa HOM05D005980 ORTHO05D007618 1.3e-187 660.2 537 64.6
Dinv32210 Davidia involucrata HOM05D005980 ORTHO05D007618 5.0e-187 658.3 438 76.0
EL10Ac1g01827 Beta vulgaris HOM05D005980 ORTHO05D007618 4.2e-186 655.2 474 70.7
Sed0023515 Sechium edule HOM05D005980 ORTHO05D007618 4.2e-186 655.2 542 63.8
Gohir.D05G148400 Gossypium hirsutum HOM05D005980 ORTHO05D007618 2.1e-185 652.9 520 66.9
AUR62028384 Chenopodium quinoa HOM05D005980 ORTHO05D007618 1.0e-184 650.6 536 64.6
Lj1A1168T68 Lonicera japonica HOM05D005980 ORTHO05D007618 1.0e-184 650.6 495 68.1
PSO675G5271 Papaver somniferum HOM05D005980 ORTHO05D007618 2.3e-184 649.4 541 64.3
Sabra16G0236200 Salix brachista HOM05D005980 ORTHO05D007618 6.8e-184 647.9 554 62.6
PSO541G1780 Papaver somniferum HOM05D005980 ORTHO05D007618 2.6e-183 646.0 541 64.0
Potri.001G358400 Populus trichocarpa HOM05D005980 ORTHO05D007618 4.4e-183 645.2 543 63.9
COL.COLO4_31005 Corchorus olitorius HOM05D005980 ORTHO05D007618 9.8e-183 644.0 504 67.5
CANSAT35G0447 Cannabis sativa HOM05D005980 ORTHO05D007618 1.3e-182 643.7 545 63.5
TWI73G1267 Tripterygium wilfordii HOM05D005980 ORTHO05D007618 2.2e-182 642.9 478 68.2
Manes.15G125300 Manihot esculenta HOM05D005980 ORTHO05D007618 7.0e-181 637.9 448 72.1
Aqoxy4G00005 Aquilegia oxysepala HOM05D005980 ORTHO05D007618 2.0e-180 636.3 474 68.6
Sed0012577 Sechium edule HOM05D005980 ORTHO05D007618 1.0e-179 634.0 542 62.4
Lj2C323G3 Lonicera japonica HOM05D005980 ORTHO05D007618 4.2e-178 628.6 493 66.9
Aa31LG10G6710 Aethionema arabicum HOM05D005980 ORTHO05D007618 6.8e-176 621.3 546 60.8
unitig_578.g16128 Utricularia gibba HOM05D005980 ORTHO05D007618 8.9e-176 620.9 536 61.6
Gorai.009G152600 Gossypium raimondii HOM05D005980 ORTHO05D007618 2.0e-175 619.8 490 66.5
FAN25G0178 Fragaria x ananassa HOM05D005980 ORTHO05D007618 5.7e-175 618.2 591 58.5
THA.LOC104820671 Tarenaya hassleriana HOM05D005980 ORTHO05D007618 5.7e-175 618.2 559 60.8
ATR1098G083 Amborella trichopoda HOM05D005980 ORTHO05D007618 7.5e-175 617.8 501 65.1
Rhsim13G0118300 Rhododendron simsii HOM05D005980 ORTHO05D007618 1.7e-174 616.7 529 63.1
BcaC02g11540 Brassica carinata HOM05D005980 ORTHO05D007618 4.9e-174 615.1 536 61.6
C04p14140 Brassica napus HOM05D005980 ORTHO05D007618 6.3e-174 614.8 536 61.9
BolC4t23002H Brassica oleracea HOM05D005980 ORTHO05D007618 1.8e-173 613.2 536 61.4
AT2G34640 Arabidopsis thaliana HOM05D005980 ORTHO05D007618 2.4e-173 612.8 541 61.7
Lj6g0019056 Lotus japonicus HOM05D005980 ORTHO05D007618 2.4e-173 612.8 481 66.7
Psat1g191560 Pisum sativum HOM05D005980 ORTHO05D007618 2.4e-173 612.8 491 66.2
A05p11020 Brassica napus HOM05D005980 ORTHO05D007618 3.1e-173 612.5 490 65.7
Carub.0004s1633 Capsella rubella HOM05D005980 ORTHO05D007618 5.4e-173 611.7 539 61.4
BraA05t20047Z Brassica rapa HOM05D005980 ORTHO05D007618 7.0e-173 611.3 490 65.5
Phvul.006G168100 Phaseolus vulgaris HOM05D005980 ORTHO05D007618 2.0e-172 609.8 481 65.3
Thhalv10016502m.g Eutrema salsugineum HOM05D005980 ORTHO05D007618 3.5e-172 609.0 542 61.8
AL4G30630 Arabidopsis lyrata HOM05D005980 ORTHO05D007618 4.5e-172 608.6 472 67.2
Gohir.A05G146100 Gossypium hirsutum HOM05D005980 ORTHO05D007618 5.9e-172 608.2 520 63.8
CARHR128740 Cardamine hirsuta HOM05D005980 ORTHO05D007618 1.3e-171 607.1 475 67.4
Glyma.13G221300 Glycine max HOM05D005980 ORTHO05D007618 6.6e-171 604.7 480 65.2
Medtr2g018740 Medicago truncatula HOM05D005980 ORTHO05D007618 2.5e-170 602.8 495 65.5
VMungo0540G0170 Vigna mungo HOM05D005980 ORTHO05D007618 1.2e-169 600.5 479 66.0
HanXRQChr10g0301191 Helianthus annuus HOM05D005980 ORTHO05D007618 1.8e-168 596.7 529 61.1
arahy.Tifrunner.gnm1.ann1.G1ZF0U Arachis hypogaea HOM05D005980 ORTHO05D007618 2.3e-168 596.3 476 65.3
Sc05g0005970 Simmondsia chinensis HOM05D005980 ORTHO05D007618 5.2e-168 595.1 458 65.3
Sp4g16910 Schrenkiella parvula HOM05D005980 ORTHO05D007618 6.8e-168 594.7 555 58.9
arahy.Tifrunner.gnm1.ann1.PI6078 Arachis hypogaea HOM05D005980 ORTHO05D007618 2.0e-167 593.2 476 64.9
TPR.G26225 Trifolium pratense HOM05D005980 ORTHO05D007618 7.5e-167 591.3 518 61.2
Lsat_1_v5_gn_9_33800 Lactuca sativa HOM05D005980 ORTHO05D007618 1.2e-164 583.9 505 62.0
Lalb_Chr18g0055171 Lupinus albus HOM05D005980 ORTHO05D007618 6.0e-164 581.6 479 64.1
Ca_00513_v3 Cicer arietinum L. HOM05D005980 ORTHO05D007618 3.0e-163 579.3 463 66.3
Ah.12g059810 Amaranthus hybridus HOM05D005980 ORTHO05D007618 8.6e-163 577.8 507 61.7
vmacro03427 Vaccinium macrocarpon HOM05D005980 ORTHO05D007618 1.2e-153 547.4 422 66.6
BcaNung07262 Brassica carinata HOM05D005980 ORTHO05D007618 1.8e-152 543.5 423 66.4
Os01g0769900 Oryza sativa ssp. japonica HOM05D005980 ORTHO05D007618 6.6e-147 525.0 504 57.3
Zm00001eb152010 Zea mays HOM05D005980 ORTHO05D007618 4.3e-146 522.3 506 57.1
ECA247G3302 Erigeron canadensis HOM05D005980 ORTHO05D007618 1.6e-145 520.4 444 61.0
HPP92_001893 Vanilla planifolia HOM05D005980 ORTHO05D007618 9.7e-98 361.7 322 59.0
Hma1.2p1_0586F.1_g183820 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 5.5e-93 345.9 257 68.9
MD05G1278700 Malus domestica HOM05D005980 ORTHO05D007618 4.7e-92 342.8 270 65.9
CDE01G0059 Ceratophyllum demersum HOM05D005980 ORTHO05D007618 2.6e-82 310.5 309 54.4
MBI02_g18932_MAGBIO Magnolia biondii HOM05D005980 ORTHO05D007618 4.8e-81 306.2 235 65.5
AagrBONN_evm.TU.Sc2ySwM_228.94 Anthoceros agrestis HOM05D005980 ORTHO05D007618 6.3e-81 305.8 485 38.8
Mapoly0061s0053 Marchantia polymorpha HOM05D005980 ORTHO05D007618 1.8e-80 304.3 439 41.0
Cpa.g.sc17.56 Carica papaya HOM05D005980 ORTHO05D007618 1.1e-72 278.5 161 82.6
Cpa.g.sc17.57 Carica papaya HOM05D005980 ORTHO05D007618 9.4e-69 265.4 272 52.9
Pp3c10_12300 Physcomitrium patens HOM05D005980 ORTHO05D007618 4.0e-67 260.0 381 38.8
Pp3c3_26950 Physcomitrium patens HOM05D005980 ORTHO05D007618 7.0e-64 249.2 487 34.7
Cpa.g.c47879 Carica papaya HOM05D005980 ORTHO05D007618 2.0e-63 247.7 197 60.4
SGA_v2.0_scaffold230G43391 Striga asiatica HOM05D005980 ORTHO05D007618 4.1e-56 223.4 126 81.7
Hma1.2p1_0581F.1_g182930 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 6.6e-54 216.1 147 74.8
SGA_v2.0_scaffold6G03478 Striga asiatica HOM05D005980 ORTHO05D007618 6.6e-54 216.1 126 82.5
arahy.Tifrunner.gnm1.ann1.D5DAI6 Arachis hypogaea HOM05D005980 ORTHO05D007618 3.7e-49 200.3 261 47.9
Lsat_1_v5_gn_1_94041 Lactuca sativa HOM05D005980 ORTHO05D007618 7.0e-48 196.1 185 54.1
HPP92_001892 Vanilla planifolia HOM05D005980 ORTHO05D007618 6.6e-46 189.5 167 59.9
CBR_g48045 Chara braunii HOM05D005980 ORTHO05D007618 2.3e-43 181.0 250 41.6
MD05G1278800 Malus domestica HOM05D005980 ORTHO05D007618 1.1e-32 145.6 80 85.0
SEGI_30301 Sequoiadendron giganteum HOM05D005980 ORTHO05D007618 3.6e-28 130.6 273 33.3
Cpa.g.sc17.55 Carica papaya HOM05D005980 ORTHO05D007618 2.4e-27 127.9 105 68.6
HanXRQChr10g0301121 Helianthus annuus HOM05D005980 ORTHO05D007618 6.6e-22 109.8 83 62.7
Glyma.15G091200 Glycine max HOM05D005980 ORTHO05D007618 1.1e-19 102.4 106 55.7
MBI02_g26594_MAGBIO Magnolia biondii HOM05D005980 ORTHO05D007618 2.0e-18 98.2 83 71.1
arahy.Tifrunner.gnm1.ann1.MPA65D Arachis hypogaea HOM05D005980 ORTHO05D007618 1.7e-17 95.1 53 81.1
Haze_05663 Corylus avellana HOM05D005980 ORTHO05D007618 1.9e-16 91.7 114 51.8
vmacro03428 Vaccinium macrocarpon HOM05D005980 ORTHO05D007618 7.8e-15 86.3 101 53.5
Actinidia33672 Actinidia chinensis HOM05D005980 ORTHO05D007618 1.0e-14 85.9 76 61.8
Lsat_1_v5_gn_7_71901 Lactuca sativa HOM05D002457 ORTHO05D005750 3.0e-14 84.3 93 47.3
MSTRG.16269 Avicennia marina HOM05D005980 ORTHO05D007618 1.1e-13 82.4 49 71.4
Lsat_1_v5_gn_1_94021 Lactuca sativa HOM05D005980 ORTHO05D007618 7.3e-13 79.7 138 43.5
MD05G1278900 Malus domestica HOM05D005980 ORTHO05D007618 2.4e-11 74.7 67 67.2
Actinidia33673 Actinidia chinensis HOM05D005980 ORTHO05D007618 5.8e-10 70.1 131 42.0
Cpa.g.c48158 Carica papaya HOM05D005980 ORTHO05D007618 5.1e-06 57.0 32 75.0


User provided reference genes

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