Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01552 Erythranthe guttata HOM05D004008 ORTHO05D005383 1.6e-203 712.6 371 100.0
SalBow8G2118 Salvia bowleyana HOM05D004008 ORTHO05D005383 1.3e-165 586.6 371 81.4
MSTRG.13067 Avicennia marina HOM05D004008 ORTHO05D005383 4.2e-164 581.6 378 81.2
Oeu052004.1 Olea europaea HOM05D004008 ORTHO05D005383 5.5e-164 581.3 370 82.2
Migut.H01689 Erythranthe guttata HOM05D004008 ORTHO05D005383 7.1e-164 580.9 380 81.3
MSTRG.14544 Avicennia marina HOM05D004008 ORTHO05D005383 2.1e-163 579.3 357 83.2
unitig_21.g20251 Utricularia gibba HOM05D004008 ORTHO05D005383 1.8e-162 576.2 358 82.4
SGA_v2.0_scaffold186G40215 Striga asiatica HOM05D004008 ORTHO05D005383 1.5e-161 573.2 398 77.1
SGA_v2.0_scaffold7G03592 Striga asiatica HOM05D004008 ORTHO05D005383 7.1e-156 554.3 381 77.7
Peaxi162Scf00452g00831 Petunia axillaris HOM05D004008 ORTHO05D005383 1.0e-154 550.4 364 78.0
Glyma.11G094700 Glycine max HOM05D004008 ORTHO05D005383 3.9e-154 548.5 327 85.0
Medtr4g076600 Medicago truncatula HOM05D004008 ORTHO05D005383 3.9e-154 548.5 358 81.3
Glyma.12G021100 Glycine max HOM05D004008 ORTHO05D005383 5.1e-154 548.1 336 83.0
Actinidia12791 Actinidia chinensis HOM05D004008 ORTHO05D005383 2.5e-153 545.8 357 78.4
Cc05_g16090 Coffea canephora HOM05D004008 ORTHO05D005383 3.3e-153 545.4 383 75.5
CSS0024885 Camellia sinensis var. sinensis HOM05D004008 ORTHO05D005383 7.4e-153 544.3 352 80.1
Sopen07g034650 Solanum pennellii HOM05D004008 ORTHO05D005383 9.6e-153 543.9 371 76.5
Lsat_1_v5_gn_7_112100 Lactuca sativa HOM05D004008 ORTHO05D005383 1.6e-152 543.1 371 77.4
AL6G18680 Arabidopsis lyrata HOM05D004008 ORTHO05D005383 2.1e-152 542.7 356 80.1
PGSC0003DMG400022126 Solanum tuberosum HOM05D004008 ORTHO05D005383 3.7e-152 542.0 371 76.3
AT5G08280 Arabidopsis thaliana HOM05D004008 ORTHO05D005383 4.8e-152 541.6 356 79.8
Potri.007G072500 Populus trichocarpa HOM05D004008 ORTHO05D005383 4.8e-152 541.6 358 78.5
GSVIVG01002505001 Vitis vinifera HOM05D004008 ORTHO05D005383 4.8e-152 541.6 325 83.7
Solyc07g066470.3 Solanum lycopersicum HOM05D004008 ORTHO05D005383 8.2e-152 540.8 371 76.0
Ca_26057_v3 Cicer arietinum L. HOM05D004008 ORTHO05D005383 1.8e-151 539.7 358 79.9
Ciclev10031858m.g Citrus clementina HOM05D004008 ORTHO05D005383 2.4e-151 539.3 362 78.7
Eucgr.C00142 Eucalyptus grandis HOM05D004008 ORTHO05D005383 3.1e-151 538.9 353 79.6
arahy.Tifrunner.gnm1.ann1.6Z73IP Arachis hypogaea HOM05D004008 ORTHO05D005383 4.1e-151 538.5 361 78.4
CAN.G943.40 Capsicum annuum HOM05D004008 ORTHO05D005383 4.1e-151 538.5 371 75.2
Phvul.011G177100 Phaseolus vulgaris HOM05D004008 ORTHO05D005383 4.1e-151 538.5 335 81.8
CARHR204850 Cardamine hirsuta HOM05D004008 ORTHO05D005383 6.9e-151 537.7 356 79.8
CsaV3_3G031800 Cucumis sativus L. HOM05D004008 ORTHO05D005383 6.9e-151 537.7 355 78.3
Psat7g172760 Pisum sativum HOM05D004008 ORTHO05D005383 6.9e-151 537.7 358 79.1
Thhalv10013814m.g Eutrema salsugineum HOM05D004008 ORTHO05D005383 9.0e-151 537.3 356 79.5
Potri.005G091600 Populus trichocarpa HOM05D004008 ORTHO05D005383 9.0e-151 537.3 358 78.5
TPR.G11683 Trifolium pratense HOM05D004008 ORTHO05D005383 1.2e-150 537.0 362 78.5
A10p28400 Brassica napus HOM05D004008 ORTHO05D005383 2.0e-150 536.2 356 78.9
BraA10t44887Z Brassica rapa HOM05D004008 ORTHO05D005383 2.0e-150 536.2 356 78.9
Hma1.2p1_0637F.1_g193530 Hydrangea macrophylla HOM05D004008 ORTHO05D005383 2.0e-150 536.2 359 76.3
Manes.11G103000 Manihot esculenta HOM05D004008 ORTHO05D005383 2.0e-150 536.2 357 79.3
Carub.0006s0716 Capsella rubella HOM05D004008 ORTHO05D005383 2.6e-150 535.8 356 79.2
Hma1.2p1_0334F.1_g128730 Hydrangea macrophylla HOM05D004008 ORTHO05D005383 2.6e-150 535.8 383 73.4
C09p68660 Brassica napus HOM05D004008 ORTHO05D005383 3.4e-150 535.4 356 79.2
Dinv19616 Davidia involucrata HOM05D004008 ORTHO05D005383 4.5e-150 535.0 357 76.8
ClCG10G012060 Citrullus lanatus HOM05D004008 ORTHO05D005383 5.9e-150 534.6 369 77.0
BcaB01g05618 Brassica carinata HOM05D004008 ORTHO05D005383 7.6e-150 534.3 356 78.9
BolC3t12952H Brassica oleracea HOM05D004008 ORTHO05D005383 7.6e-150 534.3 356 78.9
Sed0006741 Sechium edule HOM05D004008 ORTHO05D005383 1.0e-149 533.9 356 78.9
CANSAT78G1304 Cannabis sativa HOM05D004008 ORTHO05D005383 1.3e-149 533.5 356 78.1
Gohir.A03G165100 Gossypium hirsutum HOM05D004008 ORTHO05D005383 1.7e-149 533.1 353 78.8
Aa31LG3G18290 Aethionema arabicum HOM05D004008 ORTHO05D005383 2.2e-149 532.7 355 78.6
BcaNung05097 Brassica carinata HOM05D004008 ORTHO05D005383 2.2e-149 532.7 371 76.5
Cfa008746 Carpinus fangiana HOM05D004008 ORTHO05D005383 2.2e-149 532.7 325 83.1
RcHm_v2.0_Chr4g0446801 Rosa chinensis HOM05D004008 ORTHO05D005383 2.2e-149 532.7 352 78.4
Sp6g34680 Schrenkiella parvula HOM05D004008 ORTHO05D005383 2.2e-149 532.7 356 78.9
Sc10g0004580 Simmondsia chinensis HOM05D004008 ORTHO05D005383 2.2e-149 532.7 342 78.9
BolC9t59612H Brassica oleracea HOM05D004008 ORTHO05D005383 2.9e-149 532.3 356 78.7
Haze_11762 Corylus avellana HOM05D004008 ORTHO05D005383 3.8e-149 531.9 357 78.2
C03p04200 Brassica napus HOM05D004008 ORTHO05D005383 6.5e-149 531.2 356 78.9
Nitab4.5_0001749g0010 Nicotiana tabacum HOM05D004008 ORTHO05D005383 6.5e-149 531.2 363 75.8
VMungo1215G1012 Vigna mungo HOM05D004008 ORTHO05D005383 8.4e-149 530.8 324 82.7
A03p03710 Brassica napus HOM05D004008 ORTHO05D005383 1.1e-148 530.4 356 78.7
C02p03470 Brassica napus HOM05D004008 ORTHO05D005383 1.1e-148 530.4 358 77.9
BraA03t09719Z Brassica rapa HOM05D004008 ORTHO05D005383 1.1e-148 530.4 356 78.7
TWI75G1091 Tripterygium wilfordii HOM05D004008 ORTHO05D005383 1.1e-148 530.4 368 76.4
Gohir.D02G188300 Gossypium hirsutum HOM05D004008 ORTHO05D005383 1.4e-148 530.0 353 78.2
Gorai.005G211000 Gossypium raimondii HOM05D004008 ORTHO05D005383 1.9e-148 529.6 353 78.2
Nitab4.5_0001791g0020 Nicotiana tabacum HOM05D004008 ORTHO05D005383 1.9e-148 529.6 376 74.5
Peaxi162Scf00006g00139 Petunia axillaris HOM05D004008 ORTHO05D005383 1.9e-148 529.6 396 73.5
BraA02t04947Z Brassica rapa HOM05D004008 ORTHO05D005383 2.5e-148 529.3 358 77.4
CiPaw.01G129500 Carya illinoinensis HOM05D004008 ORTHO05D005383 3.2e-148 528.9 342 79.5
HanXRQChr05g0153591 Helianthus annuus HOM05D004008 ORTHO05D005383 3.2e-148 528.9 338 80.2
MD16G1003400 Malus domestica HOM05D004008 ORTHO05D005383 3.2e-148 528.9 373 75.1
arahy.Tifrunner.gnm1.ann1.416KLQ Arachis hypogaea HOM05D004008 ORTHO05D005383 4.2e-148 528.5 366 76.2
LjContig00222g0009052 Lotus japonicus HOM05D004008 ORTHO05D005383 5.5e-148 528.1 332 81.3
Glyma.01G227400 Glycine max HOM05D004008 ORTHO05D005383 7.2e-148 527.7 339 79.9
Prupe.1G348400 Prunus persica HOM05D004008 ORTHO05D005383 7.2e-148 527.7 370 74.6
Dinv42507 Davidia involucrata HOM05D004008 ORTHO05D005383 9.3e-148 527.3 359 76.0
Ah.10g029970 Amaranthus hybridus HOM05D004008 ORTHO05D005383 1.2e-147 526.9 343 78.4
MD13G1004100 Malus domestica HOM05D004008 ORTHO05D005383 1.2e-147 526.9 373 74.3
Nitab4.5_0000134g0020 Nicotiana tabacum HOM05D004008 ORTHO05D005383 1.2e-147 526.9 376 74.7
arahy.Tifrunner.gnm1.ann1.KXDS8S Arachis hypogaea HOM05D004008 ORTHO05D005383 2.1e-147 526.2 358 77.1
Aqoxy6G00207 Aquilegia oxysepala HOM05D004008 ORTHO05D005383 2.7e-147 525.8 323 82.4
EL10Ac2g02758 Beta vulgaris HOM05D004008 ORTHO05D005383 2.7e-147 525.8 324 81.2
HanXRQChr01g0007731 Helianthus annuus HOM05D004008 ORTHO05D005383 2.7e-147 525.8 338 80.5
TWI12G0055 Tripterygium wilfordii HOM05D004008 ORTHO05D005383 2.7e-147 525.8 346 79.2
TAR626G0539 Trochodendron aralioides HOM05D004008 ORTHO05D005383 3.5e-147 525.4 360 74.4
TAR626G1776 Trochodendron aralioides HOM05D004008 ORTHO05D005383 3.5e-147 525.4 360 74.4
Cpa.g.sc43.43 Carica papaya HOM05D004008 ORTHO05D005383 6.1e-147 524.6 356 78.1
Duzib132G0865 Durio zibethinus HOM05D004008 ORTHO05D005383 7.9e-147 524.2 352 76.4
VMungo1127G2017 Vigna mungo HOM05D004008 ORTHO05D005383 7.9e-147 524.2 324 82.1
THA.LOC104800860 Tarenaya hassleriana HOM05D004008 ORTHO05D005383 1.3e-146 523.5 352 78.4
FAN07G1552 Fragaria x ananassa HOM05D004008 ORTHO05D005383 1.8e-146 523.1 368 74.5
Thecc.02G158900 Theobroma cacao HOM05D004008 ORTHO05D005383 1.8e-146 523.1 359 77.2
Gorai.012G134300 Gossypium raimondii HOM05D004008 ORTHO05D005383 3.0e-146 522.3 353 77.3
BolC2t06308H Brassica oleracea HOM05D004008 ORTHO05D005383 3.9e-146 521.9 358 76.0
Lj1A905T43 Lonicera japonica HOM05D004008 ORTHO05D005383 3.9e-146 521.9 376 74.2
Phvul.002G034500 Phaseolus vulgaris HOM05D004008 ORTHO05D005383 5.1e-146 521.5 324 80.9
Rhsim06G0054400 Rhododendron simsii HOM05D004008 ORTHO05D005383 8.7e-146 520.8 368 75.5
RcHm_v2.0_Chr1g0330101 Rosa chinensis HOM05D004008 ORTHO05D005383 8.7e-146 520.8 354 76.0
COL.COLO4_33043 Corchorus olitorius HOM05D004008 ORTHO05D005383 1.1e-145 520.4 368 75.8
QL12p007515 Quercus lobata HOM05D004008 ORTHO05D005383 1.5e-145 520.0 324 81.5
FvH4_7g04700 Fragaria vesca HOM05D004008 ORTHO05D005383 1.9e-145 519.6 354 75.4
FAN10G2193 Fragaria x ananassa HOM05D004008 ORTHO05D005383 1.9e-145 519.6 354 75.4
FAN12G0417 Fragaria x ananassa HOM05D004008 ORTHO05D005383 3.3e-145 518.8 368 73.6
Lalb_Chr09g0320431 Lupinus albus HOM05D004008 ORTHO05D005383 9.7e-145 517.3 324 81.5
AUR62031735 Chenopodium quinoa HOM05D004008 ORTHO05D005383 1.6e-144 516.5 344 76.7
AUR62032620 Chenopodium quinoa HOM05D004008 ORTHO05D005383 8.2e-144 514.2 349 75.9
ECA248G2166 Erigeron canadensis HOM05D004008 ORTHO05D005383 8.2e-144 514.2 319 82.4
FAN03G0704 Fragaria x ananassa HOM05D004008 ORTHO05D005383 1.1e-143 513.8 351 75.2
PGR142G0362 Punica granatum HOM05D004008 ORTHO05D005383 1.4e-143 513.5 363 74.1
Duzib248G1235 Durio zibethinus HOM05D004008 ORTHO05D005383 1.8e-143 513.1 353 75.4
Nitab4.5_0001080g0030 Nicotiana tabacum HOM05D004008 ORTHO05D005383 1.8e-143 513.1 398 69.1
Hund13394 Selenicereus undatus HOM05D004008 ORTHO05D005383 1.8e-143 513.1 331 78.2
HPP92_002271 Vanilla planifolia HOM05D004008 ORTHO05D005383 2.4e-143 512.7 348 74.1
PSO541G2232 Papaver somniferum HOM05D004008 ORTHO05D005383 3.1e-143 512.3 345 75.4
Sabra07G0061100 Salix brachista HOM05D004008 ORTHO05D005383 4.1e-143 511.9 301 84.7
PSO675G0755 Papaver somniferum HOM05D004008 ORTHO05D005383 6.9e-143 511.1 345 75.4
ATR0763G059 Amborella trichopoda HOM05D004008 ORTHO05D005383 9.0e-143 510.8 370 71.9
CSS0025050 Camellia sinensis var. sinensis HOM05D004008 ORTHO05D005383 7.7e-142 507.7 351 76.1
MBI18_g03839_MAGBIO Magnolia biondii HOM05D004008 ORTHO05D005383 3.8e-141 505.4 352 73.9
FAN17G0554 Fragaria x ananassa HOM05D004008 ORTHO05D005383 8.5e-141 504.2 300 83.0
Gohir.A04G108500 Gossypium hirsutum HOM05D004008 ORTHO05D005383 8.5e-141 504.2 352 75.9
Sabra05G0076100 Salix brachista HOM05D004008 ORTHO05D005383 8.5e-141 504.2 301 83.4
FAN06G1123 Fragaria x ananassa HOM05D004008 ORTHO05D005383 2.5e-140 502.7 353 73.4
FAN06G2867 Fragaria x ananassa HOM05D004008 ORTHO05D005383 2.5e-140 502.7 353 73.4
vmacro11667 Vaccinium macrocarpon HOM05D004008 ORTHO05D005383 4.2e-140 501.9 459 61.7
CDE02G2123 Ceratophyllum demersum HOM05D004008 ORTHO05D005383 4.6e-139 498.4 323 78.0
BcaB08g37268 Brassica carinata HOM05D004008 ORTHO05D005383 1.0e-138 497.3 356 75.3
CDE05G3126 Ceratophyllum demersum HOM05D004008 ORTHO05D005383 1.8e-138 496.5 374 70.9
MELO3C024010.2 Cucumis melo HOM05D004008 ORTHO05D005383 1.8e-138 496.5 283 86.6
CDE11G0020 Ceratophyllum demersum HOM05D004008 ORTHO05D005383 1.1e-137 493.8 376 70.2
Lj4g0025599 Lotus japonicus HOM05D004008 ORTHO05D005383 1.3e-136 490.3 323 77.4
Mapoly0015s0060 Marchantia polymorpha HOM05D004008 ORTHO05D005383 2.8e-136 489.2 335 74.6
Zm00001eb207370 Zea mays HOM05D004008 ORTHO05D005383 3.1e-135 485.7 343 72.0
Gohir.D04G148100 Gossypium hirsutum HOM05D004008 ORTHO05D005383 5.3e-135 485.0 283 85.2
Pp3c5_16770 Physcomitrium patens HOM05D004008 ORTHO05D005383 1.2e-134 483.8 356 71.6
Os02g0168800 Oryza sativa ssp. japonica HOM05D004008 ORTHO05D005383 2.2e-133 479.6 338 72.2
Pp3c6_15990 Physcomitrium patens HOM05D004008 ORTHO05D005383 2.2e-133 479.6 346 73.4
BcaC03g13214 Brassica carinata HOM05D004008 ORTHO05D005383 3.8e-133 478.8 358 71.8
Pp3c15_6300 Physcomitrium patens HOM05D004008 ORTHO05D005383 2.5e-132 476.1 340 72.9
SMO364G0819 Selaginella moellendorffii HOM05D004008 ORTHO05D005383 2.5e-132 476.1 351 70.4
CBR_g48425 Chara braunii HOM05D004008 ORTHO05D005383 1.0e-130 470.7 344 70.3
DCAR_013737 Daucus carota HOM05D004008 ORTHO05D005383 2.3e-130 469.5 341 72.4
SEGI_21965 Sequoiadendron giganteum HOM05D004008 ORTHO05D005383 3.7e-128 462.2 299 77.3
Zm00001eb233020 Zea mays HOM05D004008 ORTHO05D005383 8.2e-128 461.1 300 76.0
TAR624G0715 Trochodendron aralioides HOM05D004008 ORTHO05D005383 1.9e-124 449.9 308 76.6
Cre16.g663900 Chlamydomonas reinhardtii HOM05D004008 ORTHO05D005383 7.5e-113 411.4 319 66.8
Oeu001944.1 Olea europaea HOM05D004008 ORTHO05D005383 4.1e-111 405.6 262 82.8
MCO01G747 Micromonas commoda HOM05D004008 ORTHO05D005383 2.5e-108 396.4 339 62.2
Sed0020742 Sechium edule HOM05D004008 ORTHO05D005383 4.0e-106 389.0 249 80.3
FvH4_4g37020 Fragaria vesca HOM05D004008 ORTHO05D005383 7.0e-103 378.3 274 75.2
PRCOL_00005560 Prasinoderma coloniale HOM05D004008 ORTHO05D005383 1.8e-95 353.6 291 62.5
AagrBONN_evm.TU.Sc2ySwM_117.3714 Anthoceros agrestis HOM05D004008 ORTHO05D005383 9.2e-95 351.3 247 76.9
Psat5g025240 Pisum sativum HOM05D004008 ORTHO05D005383 3.3e-76 289.7 310 57.7
arahy.Tifrunner.gnm1.ann1.VI50KN Arachis hypogaea HOM05D004008 ORTHO05D005383 1.3e-69 267.7 198 75.3
Haze_26918 Corylus avellana HOM05D004008 ORTHO05D163716 5.1e-69 265.8 309 51.1
Nn7g38125 Nelumbo nucifera HOM05D004008 ORTHO05D005383 2.5e-68 263.5 207 71.0
Actinidia07354 Actinidia chinensis HOM05D004008 ORTHO05D005383 3.5e-62 243.0 360 43.9
Glyma.11G015433 Glycine max HOM05D004008 ORTHO05D005383 2.7e-46 190.3 113 78.8
Psat5g278360 Pisum sativum HOM05D004008 ORTHO05D000002 6.7e-45 185.7 113 84.1
BcaC07g39332 Brassica carinata HOM05D004008 ORTHO05D032875 1.6e-43 181.0 217 55.8
C08p23470 Brassica napus HOM05D004008 ORTHO05D032875 4.8e-43 179.5 179 62.6
BolC8t49976H Brassica oleracea HOM05D004008 ORTHO05D032875 4.8e-43 179.5 179 62.6
BcaC08g43816 Brassica carinata HOM05D004008 ORTHO05D013026 1.5e-33 147.9 104 67.3
BcaC04g20718 Brassica carinata HOM05D004008 ORTHO05D027220 1.0e-32 145.2 102 68.6
C09p39940 Brassica napus HOM05D004008 ORTHO05D027220 1.0e-32 145.2 102 68.6
C03p57930 Brassica napus HOM05D004008 ORTHO05D027220 6.5e-32 142.5 102 67.6
C02p56520 Brassica napus HOM05D000109 ORTHO05D000210 1.4e-31 141.4 98 68.4
BolC9t56891H Brassica oleracea HOM05D004008 ORTHO05D013026 4.2e-31 139.8 106 64.2
Cre02.g113850 Chlamydomonas reinhardtii HOM05D004008 ORTHO05D145669 9.3e-31 138.7 284 33.1
BcaC03g17816 Brassica carinata HOM05D003055 ORTHO05D013026 1.3e-29 134.8 107 59.8
C02p58390 Brassica napus HOM05D003055 ORTHO05D013026 1.9e-28 131.0 106 59.4
BolC3t18065H Brassica oleracea HOM05D003055 ORTHO05D013026 1.1e-18 98.6 64 70.3
TPR.G13755 Trifolium pratense HOM05D004008 ORTHO05D410752 1.3e-16 91.7 67 73.1
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 1.7e-16 91.3 49 91.8
Rhsim06G0151600 Rhododendron simsii HOM05D001371 ORTHO05D001319 2.9e-16 90.5 61 80.3
C05p24790 Brassica napus HOM05D003055 ORTHO05D013026 1.3e-08 65.1 38 73.7
BcaC01g02956 Brassica carinata HOM05D003055 ORTHO05D013026 5.0e-08 63.2 40 67.5


User provided reference genes

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