Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00516 Erythranthe guttata HOM05D001794 ORTHO05D023348 1.4e-50 202.6 101 100.0
Migut.L00517 Erythranthe guttata HOM05D001794 ORTHO05D004177 9.3e-42 173.3 86 100.0
Oeu042258.3 Olea europaea HOM05D001794 ORTHO05D004177 9.0e-37 156.8 86 89.5
Oeu056760.1 Olea europaea HOM05D001794 ORTHO05D004177 1.5e-36 156.0 86 89.5
Lj4C200G5 Lonicera japonica HOM05D001794 ORTHO05D004177 3.5e-33 144.8 90 81.1
SGA_v2.0_scaffold3G01839 Striga asiatica HOM05D001794 ORTHO05D004177 7.9e-33 143.7 86 84.9
Dinv13541 Davidia involucrata HOM05D001794 ORTHO05D004177 1.0e-32 143.3 90 77.8
HanXRQChr09g0261451 Helianthus annuus HOM05D001794 ORTHO05D004177 1.8e-32 142.5 87 81.6
unitig_748.g8759 Utricularia gibba HOM05D001794 ORTHO05D004177 2.3e-32 142.1 86 83.7
Dinv39978 Davidia involucrata HOM05D001794 ORTHO05D004177 3.0e-32 141.7 90 76.7
Hma1.2p1_0400F.1_g144450 Hydrangea macrophylla HOM05D001794 ORTHO05D004177 6.7e-32 140.6 90 77.8
DCAR_017270 Daucus carota HOM05D001794 ORTHO05D004177 1.9e-31 139.0 90 78.9
Solyc02g085350.4 Solanum lycopersicum HOM05D001794 ORTHO05D004177 2.5e-31 138.7 87 81.6
Sopen02g030040 Solanum pennellii HOM05D001794 ORTHO05D004177 2.5e-31 138.7 87 81.6
Actinidia19180 Actinidia chinensis HOM05D001794 ORTHO05D023348 3.3e-31 138.3 90 77.8
CSS0026761 Camellia sinensis var. sinensis HOM05D001794 ORTHO05D004177 3.3e-31 138.3 87 81.6
Cc07_g09450 Coffea canephora HOM05D001794 ORTHO05D004177 3.3e-31 138.3 90 78.9
Lsat_1_v5_gn_4_150721 Lactuca sativa HOM05D001794 ORTHO05D004177 3.3e-31 138.3 86 77.9
ECA232G2500 Erigeron canadensis HOM05D001794 ORTHO05D004177 4.3e-31 137.9 87 81.6
HanXRQChr16g0530311 Helianthus annuus HOM05D001794 ORTHO05D004177 4.3e-31 137.9 86 81.4
Nitab4.5_0000434g0160 Nicotiana tabacum HOM05D001794 ORTHO05D004177 4.3e-31 137.9 87 80.5
PGSC0003DMG400014901 Solanum tuberosum HOM05D001794 ORTHO05D004177 4.3e-31 137.9 88 79.5
CANSAT01G3171 Cannabis sativa HOM05D001794 ORTHO05D004177 9.7e-31 136.7 95 74.7
Prupe.7G153600 Prunus persica HOM05D001794 ORTHO05D004177 9.7e-31 136.7 91 79.1
TWI09G0850 Tripterygium wilfordii HOM05D001794 ORTHO05D004177 1.3e-30 136.3 93 75.3
THA.LOC104819221 Tarenaya hassleriana HOM05D001794 ORTHO05D004177 1.6e-30 136.0 91 74.7
QL06p045882 Quercus lobata HOM05D001794 ORTHO05D004177 2.2e-30 135.6 91 79.1
AL8G44700 Arabidopsis lyrata HOM05D001794 ORTHO05D004177 2.8e-30 135.2 92 75.0
Carub.0008s2775 Capsella rubella HOM05D001794 ORTHO05D004177 2.8e-30 135.2 92 75.0
CiPaw.01G037100 Carya illinoinensis HOM05D001794 ORTHO05D004177 2.8e-30 135.2 94 75.5
DCAR_021442 Daucus carota HOM05D001794 ORTHO05D004177 2.8e-30 135.2 88 75.0
Potri.007G026400 Populus trichocarpa HOM05D001794 ORTHO05D004177 2.8e-30 135.2 91 78.0
Manes.01G134800 Manihot esculenta HOM05D001794 ORTHO05D004177 4.8e-30 134.4 91 78.0
Aa31LG1G15320 Aethionema arabicum HOM05D001794 ORTHO05D004177 6.3e-30 134.0 91 74.7
AT5G66760 Arabidopsis thaliana HOM05D001794 ORTHO05D004177 6.3e-30 134.0 92 73.9
Nitab4.5_0003835g0030 Nicotiana tabacum HOM05D001794 ORTHO05D004177 6.3e-30 134.0 88 80.7
Potri.005G123900 Populus trichocarpa HOM05D001794 ORTHO05D004177 8.2e-30 133.7 94 75.5
MD02G1148900 Malus domestica HOM05D001794 ORTHO05D004177 1.1e-29 133.3 91 76.9
MD15G1263800 Malus domestica HOM05D001794 ORTHO05D004177 1.1e-29 133.3 91 76.9
vmacro17842 Vaccinium macrocarpon HOM05D001794 ORTHO05D004177 1.4e-29 132.9 86 77.9
Sabra07G0023200 Salix brachista HOM05D001794 ORTHO05D004177 1.8e-29 132.5 91 76.9
Sabra05G0101500 Salix brachista HOM05D001794 ORTHO05D004177 2.4e-29 132.1 95 73.7
ClCG07G009150 Citrullus lanatus HOM05D001794 ORTHO05D023348 3.1e-29 131.7 93 76.3
Duzib264G0324 Durio zibethinus HOM05D001794 ORTHO05D004177 3.1e-29 131.7 91 76.9
ClCG07G006190 Citrullus lanatus HOM05D001794 ORTHO05D004177 4.1e-29 131.3 93 76.3
CsaV3_4G005080 Cucumis sativus L. HOM05D001794 ORTHO05D004177 4.1e-29 131.3 93 76.3
Thhalv10003821m.g Eutrema salsugineum HOM05D001794 ORTHO05D004177 4.1e-29 131.3 87 80.5
THA.LOC104821278 Tarenaya hassleriana HOM05D001794 ORTHO05D004177 4.1e-29 131.3 92 73.9
CSS0011689 Camellia sinensis var. sinensis HOM05D001794 ORTHO05D004177 5.3e-29 131.0 86 77.9
COL.COLO4_22089 Corchorus olitorius HOM05D001794 ORTHO05D004177 5.3e-29 131.0 87 77.0
FAN19G0995 Fragaria x ananassa HOM05D001794 ORTHO05D004177 5.3e-29 131.0 91 76.9
FvH4_1g13410 Fragaria vesca HOM05D001794 ORTHO05D004177 6.9e-29 130.6 92 76.1
FAN26G2941 Fragaria x ananassa HOM05D001794 ORTHO05D004177 6.9e-29 130.6 92 76.1
Gohir.D12G065000 Gossypium hirsutum HOM05D001794 ORTHO05D004177 6.9e-29 130.6 88 77.3
Sed0002777 Sechium edule HOM05D001794 ORTHO05D004177 6.9e-29 130.6 94 75.5
CARHR280940 Cardamine hirsuta HOM05D001794 ORTHO05D004177 1.2e-28 129.8 91 74.7
Duzib187G1849 Durio zibethinus HOM05D001794 ORTHO05D004177 1.2e-28 129.8 99 70.7
Sp2g29920 Schrenkiella parvula HOM05D001794 ORTHO05D004177 1.2e-28 129.8 87 78.2
TPR.G22290 Trifolium pratense HOM05D001794 ORTHO05D004177 1.5e-28 129.4 90 76.7
MELO3C017560.2 Cucumis melo HOM05D001794 ORTHO05D004177 2.0e-28 129.0 93 75.3
Gohir.A12G064900 Gossypium hirsutum HOM05D001794 ORTHO05D004177 2.0e-28 129.0 88 76.1
Atru.chr3.565 Acer truncatum HOM05D001794 ORTHO05D004177 2.6e-28 128.6 90 77.8
TAR376G0804 Trochodendron aralioides HOM05D001794 ORTHO05D004177 2.6e-28 128.6 93 71.0
A09p09790 Brassica napus HOM05D001794 ORTHO05D004177 3.4e-28 128.3 87 77.0
C02p64800 Brassica napus HOM05D001794 ORTHO05D004177 3.4e-28 128.3 88 75.0
BraA09t36626Z Brassica rapa HOM05D001794 ORTHO05D004177 3.4e-28 128.3 87 77.0
Ciclev10025149m.g Citrus clementina HOM05D001794 ORTHO05D004177 3.4e-28 128.3 93 75.3
FAN28G0311 Fragaria x ananassa HOM05D001794 ORTHO05D004177 3.4e-28 128.3 92 75.0
Nn1g05014 Nelumbo nucifera HOM05D001794 ORTHO05D004177 3.4e-28 128.3 95 70.5
RcHm_v2.0_Chr2g0101771 Rosa chinensis HOM05D001794 ORTHO05D004177 3.4e-28 128.3 92 75.0
TAR381G1199 Trochodendron aralioides HOM05D001794 ORTHO05D004177 3.4e-28 128.3 93 72.0
A07p17170 Brassica napus HOM05D001794 ORTHO05D004177 5.9e-28 127.5 87 77.0
BraA07t29445Z Brassica rapa HOM05D001794 ORTHO05D004177 5.9e-28 127.5 87 77.0
Gorai.008G068200 Gossypium raimondii HOM05D001794 ORTHO05D004177 5.9e-28 127.5 88 76.1
Thecc.01G036800 Theobroma cacao HOM05D001794 ORTHO05D004177 5.9e-28 127.5 89 74.2
BcaB02g09993 Brassica carinata HOM05D001794 ORTHO05D004177 7.7e-28 127.1 87 77.0
BcaC04g23158 Brassica carinata HOM05D001794 ORTHO05D004177 7.7e-28 127.1 88 76.1
C09p11590 Brassica napus HOM05D001794 ORTHO05D004177 7.7e-28 127.1 88 76.1
FAN23G1783 Fragaria x ananassa HOM05D001794 ORTHO05D004177 7.7e-28 127.1 92 75.0
Cpa.g.sc6.105 Carica papaya HOM05D001794 ORTHO05D004177 1.0e-27 126.7 90 74.4
AUR62007559 Chenopodium quinoa HOM05D001794 ORTHO05D004177 1.0e-27 126.7 95 73.7
BcaC03g18401 Brassica carinata HOM05D001794 ORTHO05D004177 1.3e-27 126.3 89 73.0
BolC2t12541H Brassica oleracea HOM05D001794 ORTHO05D004177 1.3e-27 126.3 89 73.0
Gohir.A02G164800 Gossypium hirsutum HOM05D001794 ORTHO05D023348 1.3e-27 126.3 88 75.0
BcaC06g34742 Brassica carinata HOM05D001794 ORTHO05D004177 1.7e-27 125.9 87 77.0
BcaNung00465 Brassica carinata HOM05D001794 ORTHO05D004177 1.7e-27 125.9 87 75.9
C07p25030 Brassica napus HOM05D001794 ORTHO05D004177 1.7e-27 125.9 87 77.0
BolC7t43035H Brassica oleracea HOM05D001794 ORTHO05D004177 1.7e-27 125.9 87 77.0
Glyma.01G175600 Glycine max HOM05D001794 ORTHO05D004177 1.7e-27 125.9 91 75.8
Gohir.D03G015200 Gossypium hirsutum HOM05D001794 ORTHO05D004177 1.7e-27 125.9 88 75.0
Gorai.003G015500 Gossypium raimondii HOM05D001794 ORTHO05D004177 1.7e-27 125.9 88 75.0
Nn5g29584 Nelumbo nucifera HOM05D001794 ORTHO05D004177 1.7e-27 125.9 94 72.3
Sc03g0002930 Simmondsia chinensis HOM05D001794 ORTHO05D004177 1.7e-27 125.9 87 74.7
EL10Ac6g15572 Beta vulgaris HOM05D001794 ORTHO05D004177 2.2e-27 125.6 93 73.1
Psat2g160000 Pisum sativum HOM05D001794 ORTHO05D004177 2.2e-27 125.6 87 75.9
Ca_24842_v3 Cicer arietinum L. HOM05D001794 ORTHO05D004177 3.8e-27 124.8 86 75.6
MBI16_g34331_MAGBIO Magnolia biondii HOM05D001794 ORTHO05D004177 5.0e-27 124.4 92 73.9
Medtr5g020050 Medicago truncatula HOM05D001794 ORTHO05D004177 5.0e-27 124.4 90 72.2
Thhalv10022591m.g Eutrema salsugineum HOM05D001794 ORTHO05D004177 1.4e-26 122.9 94 68.1
Duzib147G0476 Durio zibethinus HOM05D001794 ORTHO05D004177 2.5e-26 122.1 99 66.7
Hund16428 Selenicereus undatus HOM05D001794 ORTHO05D004177 2.5e-26 122.1 88 73.9
arahy.Tifrunner.gnm1.ann1.SUCZ0Z Arachis hypogaea HOM05D001794 ORTHO05D004177 3.2e-26 121.7 89 75.3
Lalb_Chr09g0322451 Lupinus albus HOM05D001794 ORTHO05D004177 3.2e-26 121.7 88 73.9
Ah.02g125220 Amaranthus hybridus HOM05D001794 ORTHO05D004177 4.2e-26 121.3 86 74.4
PGR119G0879 Punica granatum HOM05D001794 ORTHO05D004177 4.2e-26 121.3 86 77.9
Lalb_Chr16g0377871 Lupinus albus HOM05D001794 ORTHO05D004177 5.5e-26 120.9 88 73.9
Os07g0134800 Oryza sativa ssp. japonica HOM05D001794 ORTHO05D004177 5.5e-26 120.9 92 75.0
PSO541G3878 Papaver somniferum HOM05D001794 ORTHO05D004177 5.5e-26 120.9 90 70.0
PSO675G6080 Papaver somniferum HOM05D001794 ORTHO05D004177 5.5e-26 120.9 90 70.0
ATR0733G007 Amborella trichopoda HOM05D001794 ORTHO05D004177 1.2e-25 119.8 89 73.0
Aqoxy6G01095 Aquilegia oxysepala HOM05D001794 ORTHO05D004177 1.2e-25 119.8 91 68.1
AUR62004044 Chenopodium quinoa HOM05D001794 ORTHO05D004177 1.2e-25 119.8 90 73.3
Lalb_Chr05g0212841 Lupinus albus HOM05D001794 ORTHO05D004177 1.2e-25 119.8 88 72.7
Ah.03g140800 Amaranthus hybridus HOM05D001794 ORTHO05D023348 1.6e-25 119.4 89 74.2
FAN26G1716 Fragaria x ananassa HOM05D001794 ORTHO05D004177 2.1e-25 119.0 83 75.9
Aa31LG8G15600 Aethionema arabicum HOM05D001794 ORTHO05D004177 2.7e-25 118.6 92 72.8
BraA06t26252Z Brassica rapa HOM05D001794 ORTHO05D004177 2.7e-25 118.6 92 69.6
Eucgr.I02452 Eucalyptus grandis HOM05D001794 ORTHO05D004177 2.7e-25 118.6 91 67.0
VMungo1215G0549 Vigna mungo HOM05D001794 ORTHO05D004177 2.7e-25 118.6 92 70.7
AUR62000825 Chenopodium quinoa HOM05D001794 ORTHO05D004177 3.6e-25 118.2 90 72.2
Glyma.02G057400 Glycine max HOM05D001794 ORTHO05D004177 3.6e-25 118.2 92 66.3
Zm00001eb117970 Zea mays HOM05D001794 ORTHO05D004177 3.6e-25 118.2 87 79.3
Zm00001eb299550 Zea mays HOM05D001794 ORTHO05D004177 3.6e-25 118.2 87 79.3
A06p33210 Brassica napus HOM05D001794 ORTHO05D004177 4.6e-25 117.9 92 69.6
AUR62005148 Chenopodium quinoa HOM05D001794 ORTHO05D004177 6.1e-25 117.5 90 71.1
C03p59240 Brassica napus HOM05D001794 ORTHO05D004177 1.0e-24 116.7 92 69.6
Phvul.002G029800 Phaseolus vulgaris HOM05D001794 ORTHO05D004177 1.0e-24 116.7 92 70.7
AL3G51730 Arabidopsis lyrata HOM05D001794 ORTHO05D004177 2.3e-24 115.5 88 69.3
BcaB08g34836 Brassica carinata HOM05D001794 ORTHO05D004177 2.3e-24 115.5 90 72.2
CDE04G3633 Ceratophyllum demersum HOM05D001794 ORTHO05D004177 3.0e-24 115.2 94 63.8
HPP92_017748 Vanilla planifolia HOM05D001794 ORTHO05D004177 3.0e-24 115.2 90 71.1
CARHR109040 Cardamine hirsuta HOM05D001794 ORTHO05D004177 5.1e-24 114.4 90 68.9
HPP92_017680 Vanilla planifolia HOM05D001794 ORTHO05D004177 5.1e-24 114.4 90 71.1
GSVIVG01018976001 Vitis vinifera HOM05D001794 ORTHO05D004177 1.5e-23 112.8 128 53.1
BcaC01g02866 Brassica carinata HOM05D001794 ORTHO05D004177 2.0e-23 112.5 91 68.1
BolC3t18181H Brassica oleracea HOM05D001794 ORTHO05D004177 2.0e-23 112.5 91 68.1
Sp3g31870 Schrenkiella parvula HOM05D001794 ORTHO05D004177 2.0e-23 112.5 96 68.8
TPR.G34987 Trifolium pratense HOM05D001794 ORTHO05D004177 2.5e-23 112.1 88 68.2
Lj4g0016367 Lotus japonicus HOM05D001794 ORTHO05D004177 3.3e-23 111.7 89 68.5
AT2G18450 Arabidopsis thaliana HOM05D001794 ORTHO05D004177 4.3e-23 111.3 90 67.8
CDE06G0698 Ceratophyllum demersum HOM05D001794 ORTHO05D004177 4.3e-23 111.3 94 63.8
Phvul.003G253200 Phaseolus vulgaris HOM05D001794 ORTHO05D004177 5.7e-23 110.9 86 68.6
Psat4g092360 Pisum sativum HOM05D001794 ORTHO05D004177 5.7e-23 110.9 90 68.9
VMungo0251G2041 Vigna mungo HOM05D001794 ORTHO05D004177 5.7e-23 110.9 86 68.6
Ca_22263_v3 Cicer arietinum L. HOM05D001794 ORTHO05D004177 3.7e-22 108.2 87 69.0
Ca_22277_v3 Cicer arietinum L. HOM05D001794 ORTHO05D004177 3.7e-22 108.2 87 69.0
SEGI_23998 Sequoiadendron giganteum HOM05D001794 ORTHO05D004177 4.8e-22 107.8 93 64.5
SEGI_34747 Sequoiadendron giganteum HOM05D001794 ORTHO05D004177 1.8e-21 105.9 94 63.8
Cfa004301 Carpinus fangiana HOM05D001794 ORTHO05D004177 3.1e-21 105.1 51 100.0
Haze_15100 Corylus avellana HOM05D001794 ORTHO05D004177 3.1e-21 105.1 51 100.0
SMO116G0376 Selaginella moellendorffii HOM05D001794 ORTHO05D004177 3.1e-21 105.1 72 77.8
Hund28964 Selenicereus undatus HOM05D001794 ORTHO05D004177 2.0e-20 102.4 50 98.0
Hund28966 Selenicereus undatus HOM05D001794 ORTHO05D004177 2.0e-20 102.4 50 98.0
Mapoly0002s0067 Marchantia polymorpha HOM05D001794 ORTHO05D004177 2.6e-20 102.1 51 94.1
CBR_g31678 Chara braunii HOM05D001794 ORTHO05D004177 4.5e-20 101.3 82 65.9
AagrBONN_evm.TU.Sc2ySwM_368.2634 Anthoceros agrestis HOM05D001794 ORTHO05D004177 1.0e-19 100.1 51 92.2
Pp3c6_24710 Physcomitrium patens HOM05D001794 ORTHO05D004177 2.2e-19 99.0 53 90.6
PRCOL_00005432 Prasinoderma coloniale HOM05D001794 ORTHO05D004177 2.9e-19 98.6 50 94.0
Oeu056748.1 Olea europaea HOM05D001794 ORTHO05D004177 3.8e-19 98.2 58 81.0
Cre14.g619133 Chlamydomonas reinhardtii HOM05D001794 ORTHO05D004177 6.5e-19 97.4 58 81.0
Pp3c27_4920 Physcomitrium patens HOM05D001794 ORTHO05D004177 8.5e-19 97.1 53 88.7
MCO12G459 Micromonas commoda HOM05D001794 ORTHO05D004177 1.4e-18 96.3 51 88.2
Cfa024194 Carpinus fangiana HOM05D001794 ORTHO05D004177 7.2e-18 94.0 93 58.1
Haze_26259 Corylus avellana HOM05D001794 ORTHO05D004177 2.0e-15 85.9 78 60.3
Carub.0003s3259 Capsella rubella HOM05D001794 ORTHO05D004177 2.2e-11 72.4 91 49.5
SalBow5G5094 Salvia bowleyana HOM05D001794 ORTHO05D004177 2.9e-11 72.0 34 100.0


User provided reference genes

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