Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J00739 Erythranthe guttata HOM05D002784 ORTHO05D003113 9.1e-72 273.5 139 100.0
Lj7A651T30 Lonicera japonica HOM05D002784 ORTHO05D003113 5.9e-63 244.2 133 91.7
Aa31LG9G4490 Aethionema arabicum HOM05D002784 ORTHO05D003113 7.7e-63 243.8 135 90.4
BcaC02g09436 Brassica carinata HOM05D002784 ORTHO05D003113 1.3e-62 243.0 133 90.2
A04p08840 Brassica napus HOM05D002784 ORTHO05D003113 1.3e-62 243.0 133 90.2
BolC4t25835H Brassica oleracea HOM05D002784 ORTHO05D003113 1.3e-62 243.0 133 90.2
BraA04t16578Z Brassica rapa HOM05D002784 ORTHO05D003113 1.3e-62 243.0 133 90.2
HanXRQChr10g0317921 Helianthus annuus HOM05D002784 ORTHO05D003113 1.3e-62 243.0 129 93.8
C04p42720 Brassica napus HOM05D002784 ORTHO05D003113 1.7e-62 242.7 133 89.5
unitig_749.g14096 Utricularia gibba HOM05D002784 ORTHO05D003113 2.2e-62 242.3 131 92.4
MSTRG.19587 Avicennia marina HOM05D002784 ORTHO05D003113 2.9e-62 241.9 133 92.5
THA.LOC104808765 Tarenaya hassleriana HOM05D002784 ORTHO05D003113 2.9e-62 241.9 133 88.7
Sp7g10750 Schrenkiella parvula HOM05D002784 ORTHO05D003113 3.8e-62 241.5 133 90.2
Lsat_1_v5_gn_5_103641 Lactuca sativa HOM05D002784 ORTHO05D003113 5.0e-62 241.1 133 90.2
Cc06_g09730 Coffea canephora HOM05D002784 ORTHO05D003113 8.5e-62 240.4 129 93.0
Thhalv10024970m.g Eutrema salsugineum HOM05D002784 ORTHO05D003113 8.5e-62 240.4 133 89.5
Lsat_1_v5_gn_8_95280 Lactuca sativa HOM05D002784 ORTHO05D003113 1.1e-61 240.0 133 89.5
Oeu058080.1 Olea europaea HOM05D002784 ORTHO05D003113 1.1e-61 240.0 127 93.7
Ah.09g231140 Amaranthus hybridus HOM05D002784 ORTHO05D003113 1.9e-61 239.2 127 93.7
BcaB01g01528 Brassica carinata HOM05D002784 ORTHO05D003113 1.9e-61 239.2 133 88.7
BcaC07g37392 Brassica carinata HOM05D002784 ORTHO05D003113 1.9e-61 239.2 133 88.7
A08p07050 Brassica napus HOM05D002784 ORTHO05D003113 1.9e-61 239.2 133 88.7
C08p08610 Brassica napus HOM05D002784 ORTHO05D003113 1.9e-61 239.2 133 88.7
BolC8t47700H Brassica oleracea HOM05D002784 ORTHO05D003113 1.9e-61 239.2 133 88.7
BraA08t32717Z Brassica rapa HOM05D002784 ORTHO05D003113 1.9e-61 239.2 133 88.7
unitig_26.g8973 Utricularia gibba HOM05D002784 ORTHO05D003113 1.9e-61 239.2 128 93.0
CSS0001462 Camellia sinensis var. sinensis HOM05D002784 ORTHO05D003113 3.2e-61 238.4 127 92.9
CSS0034731 Camellia sinensis var. sinensis HOM05D002784 ORTHO05D003113 3.2e-61 238.4 127 92.9
Dinv36638 Davidia involucrata HOM05D002784 ORTHO05D003113 3.2e-61 238.4 127 92.9
ECA234G1860 Erigeron canadensis HOM05D002784 ORTHO05D003113 3.2e-61 238.4 128 91.4
CARHR218740 Cardamine hirsuta HOM05D002784 ORTHO05D003113 4.2e-61 238.0 133 88.7
MELO3C025347.2 Cucumis melo HOM05D002784 ORTHO05D003113 4.2e-61 238.0 133 90.2
CsaV3_1G024260 Cucumis sativus L. HOM05D002784 ORTHO05D003113 4.2e-61 238.0 133 90.2
Actinidia09422 Actinidia chinensis HOM05D002784 ORTHO05D003113 5.5e-61 237.7 127 92.9
AL9U10660 Arabidopsis lyrata HOM05D002784 ORTHO05D003113 5.5e-61 237.7 133 88.0
AT4G13250 Arabidopsis thaliana HOM05D002784 ORTHO05D003113 5.5e-61 237.7 133 88.0
Carub.0007s2941 Capsella rubella HOM05D002784 ORTHO05D003113 5.5e-61 237.7 133 88.0
Dinv41609 Davidia involucrata HOM05D002784 ORTHO05D003113 5.5e-61 237.7 129 91.5
Actinidia20375 Actinidia chinensis HOM05D002784 ORTHO05D003113 7.2e-61 237.3 129 90.7
Ciclev10008039m.g Citrus clementina HOM05D002784 ORTHO05D003113 7.2e-61 237.3 133 88.0
AUR62010985 Chenopodium quinoa HOM05D002784 ORTHO05D003113 9.4e-61 236.9 127 92.1
AUR62021494 Chenopodium quinoa HOM05D002784 ORTHO05D003113 9.4e-61 236.9 127 92.1
Rhsim03G0241500 Rhododendron simsii HOM05D002784 ORTHO05D003113 1.2e-60 236.5 127 92.1
Sc18g0001250 Simmondsia chinensis HOM05D002784 ORTHO05D003113 1.2e-60 236.5 133 89.5
MBI01_g06522_MAGBIO Magnolia biondii HOM05D002784 ORTHO05D003113 1.6e-60 236.1 128 91.4
PSO782G3661 Papaver somniferum HOM05D002784 ORTHO05D003113 1.6e-60 236.1 128 92.2
PSO832G4222 Papaver somniferum HOM05D002784 ORTHO05D003113 1.6e-60 236.1 128 92.2
Prupe.7G232100 Prunus persica HOM05D002784 ORTHO05D003113 1.6e-60 236.1 129 90.7
PGR142G0531 Punica granatum HOM05D002784 ORTHO05D003113 1.6e-60 236.1 133 88.0
Peaxi162Scf00231g00021 Petunia axillaris HOM05D002784 ORTHO05D003113 2.1e-60 235.7 127 90.6
HanXRQChr06g0179981 Helianthus annuus HOM05D002784 ORTHO05D003113 2.7e-60 235.3 127 91.3
RcHm_v2.0_Chr2g0090301 Rosa chinensis HOM05D002784 ORTHO05D003113 2.7e-60 235.3 129 89.9
Ca_20224_v3 Cicer arietinum L. HOM05D002784 ORTHO05D003113 3.6e-60 235.0 127 91.3
ClCG06G008580 Citrullus lanatus HOM05D002784 ORTHO05D003113 3.6e-60 235.0 133 88.7
MD02G1045900 Malus domestica HOM05D002784 ORTHO05D003113 3.6e-60 235.0 129 89.9
Manes.16G115400 Manihot esculenta HOM05D002784 ORTHO05D003113 3.6e-60 235.0 127 91.3
Atru.BG.6.p Acer truncatum HOM05D002784 ORTHO05D003113 4.7e-60 234.6 127 90.6
Atru.chr7.1359 Acer truncatum HOM05D002784 ORTHO05D003113 4.7e-60 234.6 127 90.6
Hund09209 Selenicereus undatus HOM05D002784 ORTHO05D003113 4.7e-60 234.6 128 89.1
Zm00001eb119410 Zea mays HOM05D002784 ORTHO05D003113 4.7e-60 234.6 127 90.6
Haze_25725 Corylus avellana HOM05D002784 ORTHO05D003113 6.1e-60 234.2 127 91.3
Hma1.2p1_0018F.1_g013600 Hydrangea macrophylla HOM05D002784 ORTHO05D003113 6.1e-60 234.2 127 90.6
Solyc07g024000.3 Solanum lycopersicum HOM05D002784 ORTHO05D003113 6.1e-60 234.2 127 90.6
Sopen07g012230 Solanum pennellii HOM05D002784 ORTHO05D003113 6.1e-60 234.2 127 90.6
PGSC0003DMG400030219 Solanum tuberosum HOM05D002784 ORTHO05D003113 6.1e-60 234.2 127 90.6
COL.COLO4_34872 Corchorus olitorius HOM05D002784 ORTHO05D003113 8.0e-60 233.8 127 89.8
FvH4_1g04700 Fragaria vesca HOM05D002784 ORTHO05D003113 8.0e-60 233.8 129 89.1
FAN19G1068 Fragaria x ananassa HOM05D002784 ORTHO05D003113 8.0e-60 233.8 129 89.1
FAN26G2551 Fragaria x ananassa HOM05D002784 ORTHO05D003113 8.0e-60 233.8 129 89.1
FAN28G2959 Fragaria x ananassa HOM05D002784 ORTHO05D003113 8.0e-60 233.8 129 89.1
Gohir.A05G023400 Gossypium hirsutum HOM05D002784 ORTHO05D003113 8.0e-60 233.8 133 86.5
Gohir.D05G024900 Gossypium hirsutum HOM05D002784 ORTHO05D003113 8.0e-60 233.8 133 86.5
Gorai.009G025000 Gossypium raimondii HOM05D002784 ORTHO05D003113 8.0e-60 233.8 133 86.5
Medtr6g088500 Medicago truncatula HOM05D002784 ORTHO05D003113 8.0e-60 233.8 129 88.4
FAN23G3117 Fragaria x ananassa HOM05D002784 ORTHO05D003113 1.0e-59 233.4 129 88.4
Glyma.07G085700 Glycine max HOM05D002784 ORTHO05D003113 1.0e-59 233.4 127 90.6
Sabra18G0068300 Salix brachista HOM05D002784 ORTHO05D003113 1.0e-59 233.4 127 90.6
TPR.G35643 Trifolium pratense HOM05D002784 ORTHO05D003113 1.0e-59 233.4 127 89.8
VMungo0464G1482 Vigna mungo HOM05D002784 ORTHO05D003113 1.0e-59 233.4 127 90.6
Os01g0227100 Oryza sativa ssp. japonica HOM05D002784 ORTHO05D003113 1.4e-59 233.0 127 89.8
Potri.018G081200 Populus trichocarpa HOM05D002784 ORTHO05D003113 1.4e-59 233.0 127 90.6
Nitab4.5_0000054g0220 Nicotiana tabacum HOM05D002784 ORTHO05D003113 1.8e-59 232.6 127 89.0
Nitab4.5_0007401g0010 Nicotiana tabacum HOM05D002784 ORTHO05D003113 1.8e-59 232.6 127 89.0
vmacro06219 Vaccinium macrocarpon HOM05D002784 ORTHO05D003113 1.8e-59 232.6 127 90.6
arahy.Tifrunner.gnm1.ann1.R2JXRC Arachis hypogaea HOM05D002784 ORTHO05D003113 2.3e-59 232.3 127 89.0
Cfa021561 Carpinus fangiana HOM05D002784 ORTHO05D003113 2.3e-59 232.3 127 90.6
Haze_25732 Corylus avellana HOM05D002784 ORTHO05D003113 2.3e-59 232.3 127 90.6
MD15G1184100 Malus domestica HOM05D002784 ORTHO05D003113 2.3e-59 232.3 129 88.4
CAN.G210.14 Capsicum annuum HOM05D002784 ORTHO05D003113 3.0e-59 231.9 127 89.0
TWI34G0459 Tripterygium wilfordii HOM05D002784 ORTHO05D003113 3.0e-59 231.9 129 87.6
TAR383G0815 Trochodendron aralioides HOM05D002784 ORTHO05D003113 3.0e-59 231.9 126 89.7
GSVIVG01015384001 Vitis vinifera HOM05D002784 ORTHO05D003113 3.0e-59 231.9 127 88.2
ATR0315G160 Amborella trichopoda HOM05D002784 ORTHO05D003113 4.0e-59 231.5 128 88.3
CiPaw.03G231400 Carya illinoinensis HOM05D002784 ORTHO05D003113 4.0e-59 231.5 127 91.3
Glyma.09G191200 Glycine max HOM05D002784 ORTHO05D003113 4.0e-59 231.5 127 89.0
Aqoxy7G01644 Aquilegia oxysepala HOM05D002784 ORTHO05D003113 5.2e-59 231.1 128 88.3
Lalb_Chr24g0397581 Lupinus albus HOM05D002784 ORTHO05D003113 5.2e-59 231.1 133 86.5
Thecc.09G109400 Theobroma cacao HOM05D002784 ORTHO05D003113 5.2e-59 231.1 127 88.2
Nn2g11727 Nelumbo nucifera HOM05D002784 ORTHO05D003113 6.8e-59 230.7 133 87.2
SGA_v2.0_scaffold17G08182 Striga asiatica HOM05D002784 ORTHO05D003113 8.8e-59 230.3 124 93.5
EL10Ac8g18487 Beta vulgaris HOM05D002784 ORTHO05D003113 1.2e-58 229.9 127 91.3
Duzib150G0136 Durio zibethinus HOM05D002784 ORTHO05D003113 1.5e-58 229.6 127 89.0
Manes.03G021500 Manihot esculenta HOM05D002784 ORTHO05D003113 1.5e-58 229.6 127 88.2
CANSAT56G0849 Cannabis sativa HOM05D002784 ORTHO05D003113 3.4e-58 228.4 129 86.0
DCAR_012071 Daucus carota HOM05D002784 ORTHO05D003113 7.5e-58 227.3 127 88.2
arahy.Tifrunner.gnm1.ann1.LV0WMB Arachis hypogaea HOM05D002784 ORTHO05D003113 9.8e-58 226.9 133 85.7
CiPaw.04G163400 Carya illinoinensis HOM05D002784 ORTHO05D003113 1.3e-57 226.5 127 87.4
HPP92_009033 Vanilla planifolia HOM05D002784 ORTHO05D003113 3.7e-57 224.9 128 85.2
HPP92_009035 Vanilla planifolia HOM05D002784 ORTHO05D003113 3.7e-57 224.9 128 85.2
Lj2g0023921 Lotus japonicus HOM05D002784 ORTHO05D003113 4.9e-57 224.6 127 87.4
Phvul.004G163900 Phaseolus vulgaris HOM05D002784 ORTHO05D003113 1.4e-56 223.0 127 87.4
CDE05G3627 Ceratophyllum demersum HOM05D002784 ORTHO05D003113 5.9e-55 217.6 127 85.0
Cpa.g.sc23.100 Carica papaya HOM05D002784 ORTHO05D003113 8.6e-54 213.8 135 83.7
Eucgr.C01035 Eucalyptus grandis HOM05D002784 ORTHO05D003113 1.0e-46 190.3 103 88.3
Mapoly0115s0053 Marchantia polymorpha HOM05D002784 ORTHO05D003113 1.2e-44 183.3 133 65.4
SMO013G0024 Selaginella moellendorffii HOM05D002784 ORTHO05D003113 1.6e-44 183.0 126 69.8
Pp3c9_4070 Physcomitrium patens HOM05D002784 ORTHO05D003113 9.8e-42 173.7 128 65.6
CDE05G2070 Ceratophyllum demersum HOM05D002784 ORTHO05D003113 1.2e-36 156.8 91 84.6
QL02p085176 Quercus lobata HOM05D002784 ORTHO05D003113 1.7e-30 136.3 73 89.0
DCAR_010453 Daucus carota HOM05D004720 ORTHO05D005359 1.2e-28 130.2 102 68.6
PRCOL_00002236 Prasinoderma coloniale HOM05D002784 ORTHO05D003113 1.9e-21 106.3 135 44.4
Cre12.g517700 Chlamydomonas reinhardtii HOM05D002784 ORTHO05D003113 6.6e-14 81.3 128 41.4
MCO03G236 Micromonas commoda HOM05D002784 ORTHO05D003113 6.0e-07 58.2 85 41.2
Pp3c22_17670 Physcomitrium patens HOM05D002784 ORTHO05D003113 7.9e-07 57.8 77 39.0
AagrBONN_evm.TU.Sc2ySwM_368.1493 Anthoceros agrestis HOM05D002784 ORTHO05D003113 2.3e-06 56.2 78 39.7
Oeu003274.1 Olea europaea HOM05D002304 ORTHO05D002363 6.6e-06 54.7 68 47.1


User provided reference genes

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