Gene: Sopen07g012230

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g012230
  • Transcript Identifier Sopen07g012230.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 29107919-29112032 : positive

Gene Family Information

  • ID HOM05D002784
  • #Genes/#Species 248/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g012230.1

Descriptions

  • Description Encodes a chlorophyll b reductase involved in the degradation of chlorophyll b and LHCII (light harvesting complex II). | NON-YELLOW COLORING 1 (NYC1) | CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain , Glucose/ribitol dehydrogenase , Short-chain dehydrogenase/reductase SDR | BEST Arabidopsis thaliana protein match is: NYC1-like ., NAD(P)-binding domain
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010304
ISO
PLAZA Integrative OrthologyPSII associated light-harvesting complex II catabolic process AT4G13250
GO:0015996
ISO
PLAZA Integrative Orthologychlorophyll catabolic process AT4G13250

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016491
IEA
InterProoxidoreductase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G13250
GO:0034256
ISO
PLAZA Integrative Orthologychlorophyll(ide) b reductase activity AT4G13250

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G13250
GO:0009536
ISO
PLAZA Integrative Orthologyplastid Os01g0227100

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002347 Short-chain dehydrogenase/reductase SDR
IPR036291 NAD(P)-binding domain superfamily
Mapman id Description
7.13.2.4.1 Coenzyme metabolism.chlorophyll metabolism.chlorophyll catabolism.chlorophyll b reductase complex.component NYC1