Gene: vmacro06219

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro06219
  • Transcript Identifier vmacro06219-RA
  • Gene Type Coding gene
  • Location chr2_Vaccinium_macrocarpon_Stevens_v1 : 3471979-3477371 : positive

Gene Family Information

  • ID HOM05D002784
  • #Genes/#Species 248/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro06219_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to NYC1: Probable chlorophyll(ide) b reductase NYC1, chloroplastic (Oryza sativa subsp. japonica OX=39947)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010304
ISO
PLAZA Integrative OrthologyPSII associated light-harvesting complex II catabolic process AT5G04900
GO:0015996
ISO
PLAZA Integrative Orthologychlorophyll catabolic process AT5G04900

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016491
IEA
InterProoxidoreductase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G04900
GO:0034256
ISO
PLAZA Integrative Orthologychlorophyll(ide) b reductase activity AT5G04900

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G04900
GO:0009536
ISO
PLAZA Integrative Orthologyplastid Os01g0227100

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002347 Short-chain dehydrogenase/reductase SDR
IPR036291 NAD(P)-binding domain superfamily
Mapman id Description
7.13.2.4.1 Coenzyme metabolism.chlorophyll metabolism.chlorophyll catabolism.chlorophyll b reductase complex.component NYC1