Gene: Os01g0227100

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os01g0227100
  • Transcript Identifier Os01t0227100-01
  • Gene Type Coding gene
  • Location chr01 : 7024383-7030057 : positive

Gene Family Information

  • ID HOM05D002784
  • #Genes/#Species 248/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os01t0227100-01
  • MSU-ID LOC_Os01g12710.2
  • MSU-ID LOC_Os01g12710.1
  • symbol OsNYC1
  • symbol nyc1
  • symbol NYC1
  • name Chlorophyl b degrading enzyme
  • name chloroplastic
  • name non-yellow coloring1
  • name short-chain dehydrogenase/reductase NYC1
  • name Probable chlorophyll(ide) b reductase NYC1
  • name Chlase
  • name Protein NON-YELLOW COLORING 1
  • name Non-Yellow Coloring 1
  • uniprot Q5N800

Descriptions

  • Description Similar to oxidoreductase.
  • Description Chlorophyll b reductase, Leaf senescence
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010304
IMP
IBA
IEA
GOA DatabasePSII associated light-harvesting complex II catabolic process
GO:0015996
IMP
IBA
IEA
GOA Databasechlorophyll catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G13250
GO:0016491
IDA
IEA
GOA Databaseoxidoreductase activity
GO:0016491
IEA
InterProoxidoreductase activity
GO:0034256
IBA
IEA
GOA Databasechlorophyll(ide) b reductase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0009579
IEA
GOA Databasethylakoid
GO:0016020
IEA
GOA Databasemembrane
GO:0009535
IEA
GOA Databasechloroplast thylakoid membrane
GO:0009507
IEA
GOA Databasechloroplast
GO:0009536
IDA
IEA
GOA Databaseplastid
GO:0042170
RCA
GOA Databaseplastid membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002347 Short-chain dehydrogenase/reductase SDR
IPR036291 NAD(P)-binding domain superfamily
Mapman id Description
7.13.2.4.1 Coenzyme metabolism.chlorophyll metabolism.chlorophyll catabolism.chlorophyll b reductase complex.component NYC1