Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I01134 Erythranthe guttata HOM05D005942 ORTHO05D007209 0.0e+00 1488.0 783 100.0
MSTRG.10908 Avicennia marina HOM05D005942 ORTHO05D007209 6.7e-297 1023.8 795 68.2
SalBow7G4809 Salvia bowleyana HOM05D005942 ORTHO05D007209 3.6e-282 974.9 793 64.6
SGA_v2.0_scaffold122G33306 Striga asiatica HOM05D005942 ORTHO05D007209 9.8e-264 913.7 729 64.3
CSS0026354 Camellia sinensis var. sinensis HOM05D005942 ORTHO05D007209 6.2e-234 814.7 721 59.1
Hma1.2p1_0090F.1_g045800 Hydrangea macrophylla HOM05D005942 ORTHO05D007209 8.9e-233 810.8 696 60.3
Dinv37817 Davidia involucrata HOM05D005942 ORTHO05D007209 3.9e-228 795.4 705 59.6
Lj9C538T8 Lonicera japonica HOM05D005942 ORTHO05D007209 3.4e-224 782.3 768 55.2
ECA234G0243 Erigeron canadensis HOM05D005942 ORTHO05D007209 7.6e-224 781.2 753 53.9
Dinv20380 Davidia involucrata HOM05D005942 ORTHO05D007209 3.2e-222 775.8 729 57.9
Peaxi162Scf00038g02336 Petunia axillaris HOM05D005942 ORTHO05D007209 4.2e-222 775.4 738 56.4
PGSC0003DMG400009149 Solanum tuberosum HOM05D005942 ORTHO05D007209 2.3e-220 769.6 738 56.2
CAN.G790.55 Capsicum annuum HOM05D005942 ORTHO05D007209 5.1e-220 768.5 740 55.5
Lsat_1_v5_gn_5_137681 Lactuca sativa HOM05D005942 ORTHO05D007209 1.9e-219 766.5 748 55.2
Solyc03g123640.3 Solanum lycopersicum HOM05D005942 ORTHO05D007209 1.9e-219 766.5 737 55.8
CiPaw.02G130800 Carya illinoinensis HOM05D005942 ORTHO05D007209 6.2e-218 761.5 792 51.9
QL05p000862 Quercus lobata HOM05D005942 ORTHO05D007209 6.9e-217 758.1 751 54.7
QL05p001132 Quercus lobata HOM05D005942 ORTHO05D007209 9.0e-217 757.7 751 54.7
TWI14G0802 Tripterygium wilfordii HOM05D005942 ORTHO05D007209 1.4e-214 750.4 785 52.9
Sopen03g041410 Solanum pennellii HOM05D005942 ORTHO05D007209 2.7e-213 746.1 696 56.9
Nitab4.5_0006338g0060 Nicotiana tabacum HOM05D005942 ORTHO05D007209 1.1e-211 740.7 697 56.7
DCAR_007660 Daucus carota HOM05D005942 ORTHO05D007209 8.1e-210 734.6 654 56.9
Oeu019509.2 Olea europaea HOM05D005942 ORTHO05D007209 1.1e-209 734.2 599 62.9
Rhsim08G0245000 Rhododendron simsii HOM05D005942 ORTHO05D007209 1.4e-209 733.8 753 54.3
Prupe.3G030900 Prunus persica HOM05D005942 ORTHO05D007209 3.1e-209 732.6 741 53.7
Ciclev10024928m.g Citrus clementina HOM05D005942 ORTHO05D007209 7.6e-208 728.0 747 53.3
GSVIVG01016664001 Vitis vinifera HOM05D005942 ORTHO05D007209 9.9e-208 727.6 759 52.8
Potri.003G073000 Populus trichocarpa HOM05D005942 ORTHO05D007209 1.3e-207 727.2 755 53.2
TAR624G0006 Trochodendron aralioides HOM05D005942 ORTHO05D007209 6.4e-207 724.9 757 53.8
Cc04_g00670 Coffea canephora HOM05D005942 ORTHO05D007209 2.1e-205 719.9 711 54.0
Thecc.06G130500 Theobroma cacao HOM05D005942 ORTHO05D007209 2.3e-204 716.5 718 53.3
CsaV3_7G033920 Cucumis sativus L. HOM05D005942 ORTHO05D007209 5.6e-203 711.8 744 50.9
PGR102G3180 Punica granatum HOM05D005942 ORTHO05D007209 6.2e-202 708.4 710 53.0
Sabra03G0043700 Salix brachista HOM05D005942 ORTHO05D007209 6.2e-202 708.4 817 50.2
Haze_16138 Corylus avellana HOM05D005942 ORTHO05D007209 1.7e-199 700.3 899 46.1
Gohir.D05G144100 Gossypium hirsutum HOM05D005942 ORTHO05D007209 4.9e-199 698.7 658 55.2
THA.LOC104813965 Tarenaya hassleriana HOM05D005942 ORTHO05D007209 8.4e-199 698.0 693 53.1
Gorai.009G148000 Gossypium raimondii HOM05D005942 ORTHO05D007209 1.4e-198 697.2 658 54.9
Nn3g21985 Nelumbo nucifera HOM05D005942 ORTHO05D007209 2.5e-198 696.4 753 51.0
ClCG09G001410 Citrullus lanatus HOM05D005942 ORTHO05D007209 9.3e-198 694.5 754 50.0
Eucgr.J02595 Eucalyptus grandis HOM05D005942 ORTHO05D007209 9.3e-198 694.5 698 52.9
Thhalv10018182m.g Eutrema salsugineum HOM05D005942 ORTHO05D007209 2.7e-197 693.0 760 50.5
COL.COLO4_30871 Corchorus olitorius HOM05D005942 ORTHO05D007209 1.3e-196 690.6 655 55.3
Duzib192G0321 Durio zibethinus HOM05D005942 ORTHO05D007209 1.8e-196 690.3 697 53.7
AL2G32000 Arabidopsis lyrata HOM05D005942 ORTHO05D007209 3.0e-196 689.5 764 50.1
MELO3C024305.2 Cucumis melo HOM05D005942 ORTHO05D007209 5.1e-196 688.7 751 50.2
Sed0028190 Sechium edule HOM05D005942 ORTHO05D007209 6.7e-196 688.3 709 52.5
CANSAT56G3801 Cannabis sativa HOM05D005942 ORTHO05D007209 8.7e-196 688.0 684 52.6
Aa31LG4G2680 Aethionema arabicum HOM05D005942 ORTHO05D007209 1.5e-195 687.2 753 50.6
Gohir.A05G141800 Gossypium hirsutum HOM05D005942 ORTHO05D007209 4.3e-195 685.6 713 52.2
AT1G72320 Arabidopsis thaliana HOM05D005942 ORTHO05D007209 1.3e-194 684.1 750 50.0
AUR62001402 Chenopodium quinoa HOM05D005942 ORTHO05D007209 1.2e-192 677.6 710 51.8
CARHR065220 Cardamine hirsuta HOM05D005942 ORTHO05D007209 4.5e-192 675.6 767 49.5
Carub.0002s1918 Capsella rubella HOM05D005942 ORTHO05D007209 5.9e-192 675.2 674 52.4
HanXRQChr10g0311801 Helianthus annuus HOM05D005942 ORTHO05D007209 1.0e-191 674.5 742 49.9
AUR62025613 Chenopodium quinoa HOM05D005942 ORTHO05D007209 3.8e-191 672.5 755 49.7
Lalb_Chr15g0076691 Lupinus albus HOM05D005942 ORTHO05D007209 8.5e-191 671.4 740 49.2
Sp5g27400 Schrenkiella parvula HOM05D005942 ORTHO05D007209 1.0e-188 664.5 721 51.0
EL10Ac7g16496 Beta vulgaris HOM05D005942 ORTHO05D007209 2.3e-188 663.3 693 53.1
FvH4_6g35860 Fragaria vesca HOM05D005942 ORTHO05D007209 3.0e-188 662.9 745 49.7
Aqoxy7G00926 Aquilegia oxysepala HOM05D005942 ORTHO05D007209 5.1e-188 662.1 684 52.3
vmacro18719 Vaccinium macrocarpon HOM05D005942 ORTHO05D007209 4.3e-187 659.1 686 52.9
Hund18636 Selenicereus undatus HOM05D005942 ORTHO05D007209 7.4e-187 658.3 718 51.0
MD09G1172500 Malus domestica HOM05D005942 ORTHO05D007209 2.8e-186 656.4 735 49.9
FAN09G3780 Fragaria x ananassa HOM05D005942 ORTHO05D007209 9.1e-185 651.4 745 49.3
Atru.chr1.4156 Acer truncatum HOM05D005942 ORTHO05D007209 4.5e-184 649.0 706 50.8
Phvul.009G261600 Phaseolus vulgaris HOM05D005942 ORTHO05D007209 5.9e-184 648.7 637 50.9
RcHm_v2.0_Chr2g0147901 Rosa chinensis HOM05D005942 ORTHO05D007209 5.9e-184 648.7 706 49.4
FAN02G3526 Fragaria x ananassa HOM05D005942 ORTHO05D007209 1.3e-183 647.5 762 47.4
FAN14G4637 Fragaria x ananassa HOM05D005942 ORTHO05D007209 2.9e-183 646.4 745 48.7
PSO170G5566 Papaver somniferum HOM05D005942 ORTHO05D007209 1.9e-182 643.7 630 53.3
Lj1g0014309 Lotus japonicus HOM05D005942 ORTHO05D007209 7.2e-182 641.7 685 48.5
Manes.04G151100 Manihot esculenta HOM05D005942 ORTHO05D007209 1.2e-181 641.0 748 49.5
VMungo1309G0067 Vigna mungo HOM05D005942 ORTHO05D007209 2.1e-181 640.2 691 49.2
BcaC08g46688 Brassica carinata HOM05D005942 ORTHO05D007209 2.7e-181 639.8 716 49.2
PSO017G1617 Papaver somniferum HOM05D005942 ORTHO05D007209 3.6e-181 639.4 686 50.9
Glyma.03G263200 Glycine max HOM05D005942 ORTHO05D007209 4.6e-181 639.0 789 45.8
BolC6t39713H Brassica oleracea HOM05D005942 ORTHO05D007209 2.3e-180 636.7 717 49.0
C06p46680 Brassica napus HOM05D005942 ORTHO05D007209 3.9e-180 636.0 717 49.0
Ah.15g094920 Amaranthus hybridus HOM05D005942 ORTHO05D007209 5.1e-180 635.6 712 50.0
TPR.G28866 Trifolium pratense HOM05D005942 ORTHO05D007209 5.1e-180 635.6 720 47.4
Medtr7g117545 Medicago truncatula HOM05D005942 ORTHO05D007209 2.0e-179 633.6 644 50.8
A07p38500 Brassica napus HOM05D005942 ORTHO05D007209 2.6e-179 633.3 721 49.4
MBI13_g01657_MAGBIO Magnolia biondii HOM05D005942 ORTHO05D007209 1.2e-176 624.4 702 48.7
BraA07t31410Z Brassica rapa HOM05D005942 ORTHO05D007209 1.5e-176 624.0 719 48.4
Nitab4.5_0001873g0040 Nicotiana tabacum HOM05D005942 ORTHO05D007209 6.5e-175 618.6 697 51.1
BcaB03g14980 Brassica carinata HOM05D005942 ORTHO05D007209 4.2e-174 615.9 717 48.4
Cfa003459 Carpinus fangiana HOM05D005942 ORTHO05D007209 1.4e-172 610.9 1095 36.9
Ca_07883_v3 Cicer arietinum L. HOM05D005942 ORTHO05D007209 2.6e-171 606.7 628 49.8
arahy.Tifrunner.gnm1.ann1.SXV5N5 Arachis hypogaea HOM05D005942 ORTHO05D007209 2.4e-169 600.1 650 48.3
Psat6g168240 Pisum sativum HOM05D005942 ORTHO05D007209 3.1e-169 599.7 680 47.2
CDE04G3550 Ceratophyllum demersum HOM05D005942 ORTHO05D007209 5.3e-169 599.0 743 46.8
Sc12g0011030 Simmondsia chinensis HOM05D005942 ORTHO05D007209 6.1e-165 585.5 641 50.4
ATR0099G013 Amborella trichopoda HOM05D005942 ORTHO05D007209 1.8e-161 573.9 652 46.8
FAN05G1996 Fragaria x ananassa HOM05D005942 ORTHO05D007209 4.2e-158 562.8 601 49.3
Nitab4.5_0007678g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 3.6e-157 559.7 682 48.4
HPP92_016652 Vanilla planifolia HOM05D005942 ORTHO05D007209 5.2e-156 555.8 592 49.0
Zm00001eb028000 Zea mays HOM05D005942 ORTHO05D007209 1.6e-149 534.3 743 42.9
AUR62043501 Chenopodium quinoa HOM05D005942 ORTHO05D007209 8.9e-140 501.9 503 52.5
unitig_62.g23675 Utricularia gibba HOM05D005942 ORTHO05D007209 1.8e-137 494.2 748 43.0
Actinidia24424 Actinidia chinensis HOM05D005942 ORTHO05D007209 3.9e-119 433.3 404 57.4
arahy.Tifrunner.gnm1.ann1.UMP4HF Arachis hypogaea HOM05D005942 ORTHO05D007209 1.1e-97 362.1 387 49.1
AagrBONN_evm.TU.Sc2ySwM_369.233 Anthoceros agrestis HOM05D005942 ORTHO05D007209 9.3e-97 359.0 572 37.8
Pp3c10_6430 Physcomitrium patens HOM05D005942 ORTHO05D007209 3.9e-95 353.6 664 35.1
Mapoly0020s0016 Marchantia polymorpha HOM05D005942 ORTHO05D007209 1.3e-93 348.6 619 35.4
Cpa.g.sc25.196 Carica papaya HOM05D005942 ORTHO05D007209 2.0e-91 341.3 319 54.9
CAN.G635.25 Capsicum annuum HOM05D005942 ORTHO05D007209 1.6e-88 331.6 537 39.3
SMO118G0133 Selaginella moellendorffii HOM05D005942 ORTHO05D007209 2.8e-85 320.9 565 36.8
Nitab4.5_0001873g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 1.5e-83 315.1 674 34.4
HPP92_016646 Vanilla planifolia HOM05D005942 ORTHO05D007209 1.0e-79 302.4 321 50.2
Cpa.g.sc25.195 Carica papaya HOM05D005942 ORTHO05D007209 6.7e-71 273.1 260 56.5
MCO05G275 Micromonas commoda HOM05D005942 ORTHO05D007209 4.7e-56 223.8 602 29.4
HPP92_016647 Vanilla planifolia HOM05D005942 ORTHO05D007209 3.5e-51 207.6 240 46.7
Cre16.g649600 Chlamydomonas reinhardtii HOM05D005942 ORTHO05D007209 8.5e-50 203.0 627 27.3
CBR_g4864 Chara braunii HOM05D005942 ORTHO05D007209 1.3e-37 162.5 676 24.7
CAN.G635.26 Capsicum annuum HOM05D005942 ORTHO05D007209 1.3e-34 152.5 184 45.7
Sabra01G0130200 Salix brachista HOM05D005942 ORTHO05D007209 5.7e-30 137.1 649 25.1
PRCOL_00005763 Prasinoderma coloniale HOM05D005942 ORTHO05D007209 1.3e-29 136.0 465 27.1
SEGI_33476 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 1.6e-27 129.0 224 37.1
Actinidia21839 Actinidia chinensis HOM05D005942 ORTHO05D007209 1.3e-26 125.9 152 50.7
SGA_v2.0_scaffold253G45152 Striga asiatica HOM05D005942 ORTHO05D007209 2.1e-24 118.6 135 52.6
Actinidia21840 Actinidia chinensis HOM05D005942 ORTHO05D007209 1.2e-22 112.8 167 41.3
SEGI_14143 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 1.3e-21 109.4 147 42.9
Glyma.19G262250 Glycine max HOM05D005942 ORTHO05D007209 8.9e-15 86.7 115 40.0
BolC2t09032H Brassica oleracea HOM05D005942 ORTHO05D007209 9.8e-14 83.2 92 46.7
C02p29840 Brassica napus HOM05D005942 ORTHO05D007209 1.7e-13 82.4 73 57.5
CBR_g19531 Chara braunii HOM05D005942 ORTHO05D007209 2.9e-13 81.6 146 32.2
Haze_02542 Corylus avellana HOM05D005942 ORTHO05D007209 3.3e-09 68.2 74 47.3
SEGI_28404 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 3.6e-08 64.7 72 43.1
Psat3g111360 Pisum sativum HOM05D001026 ORTHO05D005232 6.2e-08 63.9 49 59.2


User provided reference genes

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