Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01689 Erythranthe guttata HOM05D004008 ORTHO05D005383 4.8e-208 727.6 381 100.0
MSTRG.14544 Avicennia marina HOM05D004008 ORTHO05D005383 1.2e-171 606.7 378 83.6
MSTRG.13067 Avicennia marina HOM05D004008 ORTHO05D005383 1.6e-171 606.3 381 84.5
unitig_21.g20251 Utricularia gibba HOM05D004008 ORTHO05D005383 2.9e-168 595.5 381 82.2
Migut.M01552 Erythranthe guttata HOM05D004008 ORTHO05D005383 4.3e-164 581.6 380 81.3
Oeu052004.1 Olea europaea HOM05D004008 ORTHO05D005383 4.4e-161 571.6 377 80.6
SalBow8G2118 Salvia bowleyana HOM05D004008 ORTHO05D005383 2.9e-160 568.9 362 80.4
SGA_v2.0_scaffold186G40215 Striga asiatica HOM05D004008 ORTHO05D005383 1.0e-157 560.5 401 76.1
SGA_v2.0_scaffold7G03592 Striga asiatica HOM05D004008 ORTHO05D005383 2.4e-154 549.3 384 78.4
Actinidia12791 Actinidia chinensis HOM05D004008 ORTHO05D005383 9.9e-153 543.9 379 74.9
Haze_11762 Corylus avellana HOM05D004008 ORTHO05D005383 2.2e-152 542.7 357 79.0
Dinv19616 Davidia involucrata HOM05D004008 ORTHO05D005383 2.9e-152 542.3 361 77.3
Cc05_g16090 Coffea canephora HOM05D004008 ORTHO05D005383 8.4e-152 540.8 382 74.1
Sopen07g034650 Solanum pennellii HOM05D004008 ORTHO05D005383 8.4e-152 540.8 359 77.4
Hma1.2p1_0637F.1_g193530 Hydrangea macrophylla HOM05D004008 ORTHO05D005383 1.4e-151 540.0 379 73.9
Peaxi162Scf00452g00831 Petunia axillaris HOM05D004008 ORTHO05D005383 1.9e-151 539.7 380 73.4
Solyc07g066470.3 Solanum lycopersicum HOM05D004008 ORTHO05D005383 1.9e-151 539.7 359 77.2
Lsat_1_v5_gn_7_112100 Lactuca sativa HOM05D004008 ORTHO05D005383 2.4e-151 539.3 358 77.1
PGSC0003DMG400022126 Solanum tuberosum HOM05D004008 ORTHO05D005383 2.4e-151 539.3 359 77.2
Cfa008746 Carpinus fangiana HOM05D004008 ORTHO05D005383 5.4e-151 538.1 357 78.2
Prupe.1G348400 Prunus persica HOM05D004008 ORTHO05D005383 5.4e-151 538.1 365 77.0
Sed0006741 Sechium edule HOM05D004008 ORTHO05D005383 5.4e-151 538.1 374 75.4
Medtr4g076600 Medicago truncatula HOM05D004008 ORTHO05D005383 2.7e-150 535.8 362 77.9
AT5G08280 Arabidopsis thaliana HOM05D004008 ORTHO05D005383 4.6e-150 535.0 383 74.7
Glyma.11G094700 Glycine max HOM05D004008 ORTHO05D005383 4.6e-150 535.0 326 81.9
AL6G18680 Arabidopsis lyrata HOM05D004008 ORTHO05D005383 6.0e-150 534.6 383 74.7
CsaV3_3G031800 Cucumis sativus L. HOM05D004008 ORTHO05D005383 1.3e-149 533.5 366 75.7
Dinv42507 Davidia involucrata HOM05D004008 ORTHO05D005383 1.3e-149 533.5 377 74.3
Manes.11G103000 Manihot esculenta HOM05D004008 ORTHO05D005383 1.3e-149 533.5 356 77.2
CAN.G943.40 Capsicum annuum HOM05D004008 ORTHO05D005383 2.3e-149 532.7 359 75.2
Potri.007G072500 Populus trichocarpa HOM05D004008 ORTHO05D005383 2.3e-149 532.7 378 74.1
Glyma.12G021100 Glycine max HOM05D004008 ORTHO05D005383 3.0e-149 532.3 342 79.8
CSS0024885 Camellia sinensis var. sinensis HOM05D004008 ORTHO05D005383 3.9e-149 531.9 370 76.2
Carub.0006s0716 Capsella rubella HOM05D004008 ORTHO05D005383 8.7e-149 530.8 383 73.9
CiPaw.01G129500 Carya illinoinensis HOM05D004008 ORTHO05D005383 1.1e-148 530.4 349 78.8
Phvul.011G177100 Phaseolus vulgaris HOM05D004008 ORTHO05D005383 2.5e-148 529.3 325 81.8
Ciclev10031858m.g Citrus clementina HOM05D004008 ORTHO05D005383 3.3e-148 528.9 363 75.5
Psat7g172760 Pisum sativum HOM05D004008 ORTHO05D005383 3.3e-148 528.9 354 77.1
CANSAT78G1304 Cannabis sativa HOM05D004008 ORTHO05D005383 4.3e-148 528.5 355 76.1
Hma1.2p1_0334F.1_g128730 Hydrangea macrophylla HOM05D004008 ORTHO05D005383 5.6e-148 528.1 382 73.0
Nitab4.5_0001749g0010 Nicotiana tabacum HOM05D004008 ORTHO05D005383 5.6e-148 528.1 351 76.9
GSVIVG01002505001 Vitis vinifera HOM05D004008 ORTHO05D005383 5.6e-148 528.1 324 82.1
Eucgr.C00142 Eucalyptus grandis HOM05D004008 ORTHO05D005383 7.3e-148 527.7 379 74.4
Potri.005G091600 Populus trichocarpa HOM05D004008 ORTHO05D005383 9.6e-148 527.3 377 73.5
Aa31LG3G18290 Aethionema arabicum HOM05D004008 ORTHO05D005383 1.6e-147 526.6 385 72.7
A10p28400 Brassica napus HOM05D004008 ORTHO05D005383 2.1e-147 526.2 386 72.3
BraA10t44887Z Brassica rapa HOM05D004008 ORTHO05D005383 2.1e-147 526.2 386 72.3
RcHm_v2.0_Chr4g0446801 Rosa chinensis HOM05D004008 ORTHO05D005383 2.1e-147 526.2 359 75.2
CARHR204850 Cardamine hirsuta HOM05D004008 ORTHO05D005383 3.6e-147 525.4 387 72.6
Lj1A905T43 Lonicera japonica HOM05D004008 ORTHO05D005383 3.6e-147 525.4 381 74.3
TPR.G11683 Trifolium pratense HOM05D004008 ORTHO05D005383 3.6e-147 525.4 324 81.8
C09p68660 Brassica napus HOM05D004008 ORTHO05D005383 4.8e-147 525.0 386 72.5
arahy.Tifrunner.gnm1.ann1.6Z73IP Arachis hypogaea HOM05D004008 ORTHO05D005383 8.1e-147 524.2 333 79.3
Ca_26057_v3 Cicer arietinum L. HOM05D004008 ORTHO05D005383 8.1e-147 524.2 380 73.9
TWI75G1091 Tripterygium wilfordii HOM05D004008 ORTHO05D005383 8.1e-147 524.2 351 76.9
Thhalv10013814m.g Eutrema salsugineum HOM05D004008 ORTHO05D005383 1.8e-146 523.1 356 76.1
Gohir.A03G165100 Gossypium hirsutum HOM05D004008 ORTHO05D005383 1.8e-146 523.1 387 72.1
BolC9t59612H Brassica oleracea HOM05D004008 ORTHO05D005383 2.4e-146 522.7 386 72.0
RcHm_v2.0_Chr1g0330101 Rosa chinensis HOM05D004008 ORTHO05D005383 4.0e-146 521.9 350 75.4
ClCG10G012060 Citrullus lanatus HOM05D004008 ORTHO05D005383 9.0e-146 520.8 381 73.0
Glyma.01G227400 Glycine max HOM05D004008 ORTHO05D005383 9.0e-146 520.8 328 79.6
Nitab4.5_0000134g0020 Nicotiana tabacum HOM05D004008 ORTHO05D005383 1.5e-145 520.0 362 75.1
Sp6g34680 Schrenkiella parvula HOM05D004008 ORTHO05D005383 1.5e-145 520.0 385 71.4
THA.LOC104800860 Tarenaya hassleriana HOM05D004008 ORTHO05D005383 2.0e-145 519.6 364 75.0
A03p03710 Brassica napus HOM05D004008 ORTHO05D005383 2.6e-145 519.2 355 75.8
BraA03t09719Z Brassica rapa HOM05D004008 ORTHO05D005383 2.6e-145 519.2 355 75.8
VMungo1215G1012 Vigna mungo HOM05D004008 ORTHO05D005383 2.6e-145 519.2 342 76.9
COL.COLO4_33043 Corchorus olitorius HOM05D004008 ORTHO05D005383 3.4e-145 518.8 366 75.1
Duzib132G0865 Durio zibethinus HOM05D004008 ORTHO05D005383 3.4e-145 518.8 358 75.1
Nitab4.5_0001791g0020 Nicotiana tabacum HOM05D004008 ORTHO05D005383 3.4e-145 518.8 356 75.8
BcaNung05097 Brassica carinata HOM05D004008 ORTHO05D005383 4.5e-145 518.5 382 72.8
C03p04200 Brassica napus HOM05D004008 ORTHO05D005383 4.5e-145 518.5 384 71.6
HanXRQChr01g0007731 Helianthus annuus HOM05D004008 ORTHO05D005383 4.5e-145 518.5 336 78.6
arahy.Tifrunner.gnm1.ann1.416KLQ Arachis hypogaea HOM05D004008 ORTHO05D005383 5.8e-145 518.1 361 74.2
BcaB01g05618 Brassica carinata HOM05D004008 ORTHO05D005383 7.6e-145 517.7 384 71.6
BolC3t12952H Brassica oleracea HOM05D004008 ORTHO05D005383 7.6e-145 517.7 384 71.6
TAR626G0539 Trochodendron aralioides HOM05D004008 ORTHO05D005383 7.6e-145 517.7 360 72.5
TAR626G1776 Trochodendron aralioides HOM05D004008 ORTHO05D005383 7.6e-145 517.7 360 72.5
C02p03470 Brassica napus HOM05D004008 ORTHO05D005383 9.9e-145 517.3 384 70.8
BraA02t04947Z Brassica rapa HOM05D004008 ORTHO05D005383 9.9e-145 517.3 384 70.8
Gohir.D02G188300 Gossypium hirsutum HOM05D004008 ORTHO05D005383 9.9e-145 517.3 387 71.3
MD16G1003400 Malus domestica HOM05D004008 ORTHO05D005383 9.9e-145 517.3 354 74.9
Gorai.012G134300 Gossypium raimondii HOM05D004008 ORTHO05D005383 1.3e-144 516.9 359 74.9
arahy.Tifrunner.gnm1.ann1.KXDS8S Arachis hypogaea HOM05D004008 ORTHO05D005383 1.7e-144 516.5 353 75.9
Cpa.g.sc43.43 Carica papaya HOM05D004008 ORTHO05D005383 1.7e-144 516.5 358 75.1
Gorai.005G211000 Gossypium raimondii HOM05D004008 ORTHO05D005383 1.7e-144 516.5 387 71.3
HanXRQChr05g0153591 Helianthus annuus HOM05D004008 ORTHO05D005383 1.7e-144 516.5 331 79.2
EL10Ac2g02758 Beta vulgaris HOM05D004008 ORTHO05D005383 2.2e-144 516.2 334 77.8
MD13G1004100 Malus domestica HOM05D004008 ORTHO05D005383 2.9e-144 515.8 359 74.4
Rhsim06G0054400 Rhododendron simsii HOM05D004008 ORTHO05D005383 6.4e-144 514.6 366 74.6
FvH4_7g04700 Fragaria vesca HOM05D004008 ORTHO05D005383 8.4e-144 514.2 361 73.1
FAN10G2193 Fragaria x ananassa HOM05D004008 ORTHO05D005383 8.4e-144 514.2 361 73.1
Nitab4.5_0001080g0030 Nicotiana tabacum HOM05D004008 ORTHO05D005383 8.4e-144 514.2 386 70.5
VMungo1127G2017 Vigna mungo HOM05D004008 ORTHO05D005383 8.4e-144 514.2 328 79.0
QL12p007515 Quercus lobata HOM05D004008 ORTHO05D005383 1.1e-143 513.8 332 79.2
Phvul.002G034500 Phaseolus vulgaris HOM05D004008 ORTHO05D005383 1.4e-143 513.5 341 76.0
Thecc.02G158900 Theobroma cacao HOM05D004008 ORTHO05D005383 2.4e-143 512.7 351 75.8
Aqoxy6G00207 Aquilegia oxysepala HOM05D004008 ORTHO05D005383 3.2e-143 512.3 359 73.5
BolC2t06308H Brassica oleracea HOM05D004008 ORTHO05D005383 3.2e-143 512.3 384 70.1
PGR142G0362 Punica granatum HOM05D004008 ORTHO05D005383 3.2e-143 512.3 352 75.6
TWI12G0055 Tripterygium wilfordii HOM05D004008 ORTHO05D005383 3.2e-143 512.3 356 75.0
FAN07G1552 Fragaria x ananassa HOM05D004008 ORTHO05D005383 5.4e-143 511.5 351 74.9
LjContig00222g0009052 Lotus japonicus HOM05D004008 ORTHO05D005383 5.4e-143 511.5 333 77.5
Sc10g0004580 Simmondsia chinensis HOM05D004008 ORTHO05D005383 7.1e-143 511.1 352 73.6
Peaxi162Scf00006g00139 Petunia axillaris HOM05D004008 ORTHO05D005383 3.5e-142 508.8 373 72.4
FAN12G0417 Fragaria x ananassa HOM05D004008 ORTHO05D005383 4.6e-142 508.4 350 74.6
Lalb_Chr09g0320431 Lupinus albus HOM05D004008 ORTHO05D005383 7.9e-142 507.7 357 73.9
Ah.10g029970 Amaranthus hybridus HOM05D004008 ORTHO05D005383 1.0e-141 507.3 368 71.2
Duzib248G1235 Durio zibethinus HOM05D004008 ORTHO05D005383 1.3e-141 506.9 358 73.5
FAN03G0704 Fragaria x ananassa HOM05D004008 ORTHO05D005383 6.7e-141 504.6 358 72.6
ECA248G2166 Erigeron canadensis HOM05D004008 ORTHO05D005383 3.3e-140 502.3 315 79.7
PSO675G0755 Papaver somniferum HOM05D004008 ORTHO05D005383 5.6e-140 501.5 351 71.5
ATR0763G059 Amborella trichopoda HOM05D004008 ORTHO05D005383 7.4e-140 501.1 350 73.4
PSO541G2232 Papaver somniferum HOM05D004008 ORTHO05D005383 1.6e-139 500.0 351 71.2
Sabra07G0061100 Salix brachista HOM05D004008 ORTHO05D005383 6.2e-139 498.0 460 61.5
Hund13394 Selenicereus undatus HOM05D004008 ORTHO05D005383 6.2e-139 498.0 350 73.1
CSS0025050 Camellia sinensis var. sinensis HOM05D004008 ORTHO05D005383 2.4e-138 496.1 373 72.1
Gohir.A04G108500 Gossypium hirsutum HOM05D004008 ORTHO05D005383 3.1e-138 495.7 357 73.1
MBI18_g03839_MAGBIO Magnolia biondii HOM05D004008 ORTHO05D005383 6.9e-138 494.6 359 70.8
AUR62031735 Chenopodium quinoa HOM05D004008 ORTHO05D005383 1.2e-137 493.8 354 70.9
AUR62032620 Chenopodium quinoa HOM05D004008 ORTHO05D005383 1.2e-137 493.8 359 70.8
FAN06G1123 Fragaria x ananassa HOM05D004008 ORTHO05D005383 1.5e-137 493.4 360 70.8
FAN06G2867 Fragaria x ananassa HOM05D004008 ORTHO05D005383 1.5e-137 493.4 360 70.8
FAN17G0554 Fragaria x ananassa HOM05D004008 ORTHO05D005383 2.6e-137 492.7 300 80.3
CDE05G3126 Ceratophyllum demersum HOM05D004008 ORTHO05D005383 5.8e-137 491.5 352 72.2
vmacro11667 Vaccinium macrocarpon HOM05D004008 ORTHO05D005383 5.8e-137 491.5 470 59.8
CDE11G0020 Ceratophyllum demersum HOM05D004008 ORTHO05D005383 9.9e-137 490.7 351 71.2
HPP92_002271 Vanilla planifolia HOM05D004008 ORTHO05D005383 1.3e-136 490.3 330 73.0
Sabra05G0076100 Salix brachista HOM05D004008 ORTHO05D005383 1.7e-136 490.0 430 62.8
BcaB08g37268 Brassica carinata HOM05D004008 ORTHO05D005383 5.5e-135 485.0 386 68.7
CDE02G2123 Ceratophyllum demersum HOM05D004008 ORTHO05D005383 9.3e-135 484.2 323 75.2
MELO3C024010.2 Cucumis melo HOM05D004008 ORTHO05D005383 1.0e-133 480.7 283 83.7
Lj4g0025599 Lotus japonicus HOM05D004008 ORTHO05D005383 1.3e-133 480.3 323 75.2
Mapoly0015s0060 Marchantia polymorpha HOM05D004008 ORTHO05D005383 1.9e-132 476.5 324 74.1
Gohir.D04G148100 Gossypium hirsutum HOM05D004008 ORTHO05D005383 9.6e-132 474.2 283 83.0
Os02g0168800 Oryza sativa ssp. japonica HOM05D004008 ORTHO05D005383 1.3e-131 473.8 330 72.1
Pp3c5_16770 Physcomitrium patens HOM05D004008 ORTHO05D005383 2.8e-131 472.6 325 74.2
BcaC03g13214 Brassica carinata HOM05D004008 ORTHO05D005383 4.0e-130 468.8 384 66.4
Zm00001eb207370 Zea mays HOM05D004008 ORTHO05D005383 5.3e-130 468.4 330 70.9
DCAR_013737 Daucus carota HOM05D004008 ORTHO05D005383 1.2e-129 467.2 347 71.2
SMO364G0819 Selaginella moellendorffii HOM05D004008 ORTHO05D005383 4.5e-129 465.3 334 71.6
Pp3c6_15990 Physcomitrium patens HOM05D004008 ORTHO05D005383 5.8e-129 464.9 312 74.4
CBR_g48425 Chara braunii HOM05D004008 ORTHO05D005383 7.6e-129 464.5 340 70.0
Pp3c15_6300 Physcomitrium patens HOM05D004008 ORTHO05D005383 4.9e-128 461.8 312 74.4
Zm00001eb233020 Zea mays HOM05D004008 ORTHO05D005383 7.4e-124 448.0 300 74.0
SEGI_21965 Sequoiadendron giganteum HOM05D004008 ORTHO05D005383 1.6e-123 446.8 299 74.9
TAR624G0715 Trochodendron aralioides HOM05D004008 ORTHO05D005383 9.0e-122 441.0 315 72.4
Oeu001944.1 Olea europaea HOM05D004008 ORTHO05D005383 2.9e-112 409.5 257 85.2
Cre16.g663900 Chlamydomonas reinhardtii HOM05D004008 ORTHO05D005383 2.5e-111 406.4 332 64.5
MCO01G747 Micromonas commoda HOM05D004008 ORTHO05D005383 1.4e-106 390.6 312 64.1
Sed0020742 Sechium edule HOM05D004008 ORTHO05D005383 7.0e-106 388.3 249 79.9
FvH4_4g37020 Fragaria vesca HOM05D004008 ORTHO05D005383 5.7e-100 368.6 257 76.3
PRCOL_00005560 Prasinoderma coloniale HOM05D004008 ORTHO05D005383 2.7e-94 349.7 290 60.7
AagrBONN_evm.TU.Sc2ySwM_117.3714 Anthoceros agrestis HOM05D004008 ORTHO05D005383 5.7e-92 342.0 279 67.4
Psat5g025240 Pisum sativum HOM05D004008 ORTHO05D005383 1.0e-72 278.1 300 55.0
Haze_26918 Corylus avellana HOM05D004008 ORTHO05D163716 6.8e-69 265.4 308 51.0
Nn7g38125 Nelumbo nucifera HOM05D004008 ORTHO05D005383 2.0e-68 263.8 190 73.7
arahy.Tifrunner.gnm1.ann1.VI50KN Arachis hypogaea HOM05D004008 ORTHO05D005383 1.3e-67 261.2 170 78.8
Actinidia07354 Actinidia chinensis HOM05D004008 ORTHO05D005383 1.8e-61 240.7 382 42.9
Psat5g278360 Pisum sativum HOM05D004008 ORTHO05D000002 7.6e-44 182.2 113 80.5
Glyma.11G015433 Glycine max HOM05D004008 ORTHO05D005383 6.4e-43 179.1 113 73.5
BcaC07g39332 Brassica carinata HOM05D004008 ORTHO05D032875 1.9e-42 177.6 204 55.9
C08p23470 Brassica napus HOM05D004008 ORTHO05D032875 2.4e-42 177.2 176 60.8
BolC8t49976H Brassica oleracea HOM05D004008 ORTHO05D032875 2.4e-42 177.2 176 60.8
Cre02.g113850 Chlamydomonas reinhardtii HOM05D004008 ORTHO05D145669 1.2e-33 148.3 334 32.6
BcaC08g43816 Brassica carinata HOM05D004008 ORTHO05D013026 1.6e-30 137.9 102 63.7
BcaC04g20718 Brassica carinata HOM05D004008 ORTHO05D027220 1.1e-29 135.2 102 63.7
C09p39940 Brassica napus HOM05D004008 ORTHO05D027220 1.1e-29 135.2 102 63.7
BolC9t56891H Brassica oleracea HOM05D004008 ORTHO05D013026 3.1e-29 133.7 106 59.4
C03p57930 Brassica napus HOM05D004008 ORTHO05D027220 6.9e-29 132.5 102 62.7
C02p56520 Brassica napus HOM05D000109 ORTHO05D000210 1.5e-28 131.3 98 63.3
BcaC03g17816 Brassica carinata HOM05D003055 ORTHO05D013026 4.5e-28 129.8 107 57.0
C02p58390 Brassica napus HOM05D003055 ORTHO05D013026 2.2e-27 127.5 106 56.6
BolC3t18065H Brassica oleracea HOM05D003055 ORTHO05D013026 2.7e-17 94.0 64 65.6
TPR.G13755 Trifolium pratense HOM05D004008 ORTHO05D410752 2.7e-17 94.0 67 74.6
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 1.0e-16 92.0 49 91.8
Rhsim06G0151600 Rhododendron simsii HOM05D001371 ORTHO05D001319 5.7e-15 86.3 61 77.0
C05p24790 Brassica napus HOM05D003055 ORTHO05D013026 5.7e-07 59.7 38 68.4
BcaC01g02956 Brassica carinata HOM05D003055 ORTHO05D013026 2.8e-06 57.4 40 62.5


User provided reference genes

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