Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01166 Erythranthe guttata HOM05D000806 ORTHO05D007429 5.5e-98 360.9 177 100.0
Migut.H01167 Erythranthe guttata HOM05D000806 ORTHO05D007429 5.5e-98 360.9 177 100.0
CAN.G3.24 Capsicum annuum HOM05D000806 ORTHO05D007429 8.0e-89 330.5 171 93.6
Nn010s41435 Nelumbo nucifera HOM05D000806 ORTHO05D007429 2.3e-88 328.9 171 93.0
Nn265s45955 Nelumbo nucifera HOM05D000806 ORTHO05D007429 2.3e-88 328.9 171 93.0
DCAR_032495 Daucus carota HOM05D000806 ORTHO05D007429 5.2e-88 327.8 171 92.4
Gohir.A07G163672 Gossypium hirsutum HOM05D000806 ORTHO05D007429 2.6e-87 325.5 171 91.2
HanXRQChr01g0020361 Helianthus annuus HOM05D000806 ORTHO05D007429 7.5e-87 323.9 171 90.6
HanXRQChr10g0283551 Helianthus annuus HOM05D000806 ORTHO05D007429 7.5e-87 323.9 171 90.6
HanXRQChr10g0289261 Helianthus annuus HOM05D000806 ORTHO05D007429 7.5e-87 323.9 171 90.6
HanXRQChr10g0318201 Helianthus annuus HOM05D000806 ORTHO05D007429 7.5e-87 323.9 171 90.6
HanXRQChr11g0326821 Helianthus annuus HOM05D000806 ORTHO05D007429 7.5e-87 323.9 171 90.6
HanXRQCPg0580031 Helianthus annuus HOM05D000806 ORTHO05D007429 7.5e-87 323.9 171 90.6
Hma1.2p1_0035F.1_g021940 Hydrangea macrophylla HOM05D000806 ORTHO05D007429 7.5e-87 323.9 171 91.8
Sed0015006 Sechium edule HOM05D000806 ORTHO05D007429 9.8e-87 323.6 171 90.6
Duzib198G0003 Durio zibethinus HOM05D000806 ORTHO05D002324 4.8e-86 321.2 168 91.1
Eucgr.E02608 Eucalyptus grandis HOM05D000806 ORTHO05D007429 6.3e-86 320.9 171 89.5
Lj2P1237T60 Lonicera japonica HOM05D000806 ORTHO05D007429 2.4e-85 318.9 171 89.5
PSO548G0038 Papaver somniferum HOM05D000806 ORTHO05D007429 2.4e-85 318.9 171 88.9
Potri.013G162400 Populus trichocarpa HOM05D000806 ORTHO05D007429 2.4e-85 318.9 171 88.9
PGR111G0079 Punica granatum HOM05D000806 ORTHO05D007429 2.4e-85 318.9 171 88.9
MELO3C027107.2 Cucumis melo HOM05D000806 ORTHO05D007429 5.4e-85 317.8 171 89.5
Gohir.A07G163690 Gossypium hirsutum HOM05D000806 ORTHO05D007429 1.6e-84 316.2 171 90.1
RcHm_v2.0_CPg0502091 Rosa chinensis HOM05D000806 ORTHO05D007429 7.7e-84 313.9 171 88.9
RcHm_v2.0_Chr5g0042981 Rosa chinensis HOM05D000806 ORTHO05D007429 2.9e-83 312.0 171 88.3
BraSC103t45466Z Brassica rapa HOM05D000806 ORTHO05D007429 1.0e-80 303.5 171 86.5
ATCG00520 Arabidopsis thaliana HOM05D000806 ORTHO05D007429 1.4e-80 303.1 171 86.0
A06p23190 Brassica napus HOM05D000806 ORTHO05D007429 4.0e-80 301.6 171 86.0
C09p29600 Brassica napus HOM05D000806 ORTHO05D007429 4.0e-80 301.6 171 86.0
C09p40230 Brassica napus HOM05D000806 ORTHO05D007429 4.0e-80 301.6 171 86.0
BraSC25t45866Z Brassica rapa HOM05D000806 ORTHO05D007429 4.0e-80 301.6 171 86.0
BraSC59t46591Z Brassica rapa HOM05D000806 ORTHO05D007429 4.0e-80 301.6 171 86.0
CARHR282100 Cardamine hirsuta HOM05D000806 ORTHO05D007429 4.0e-80 301.6 171 85.4
AL2G20666 Arabidopsis lyrata HOM05D000806 ORTHO05D007429 2.6e-79 298.9 168 85.7
BolC9t56915H Brassica oleracea HOM05D000806 ORTHO05D007429 2.6e-79 298.9 171 84.8
BolSC35t60646H Brassica oleracea HOM05D000806 ORTHO05D007429 2.6e-79 298.9 171 85.4
BolSC35t60750H Brassica oleracea HOM05D000806 ORTHO05D007429 2.6e-79 298.9 171 85.4
BolSC49t61183H Brassica oleracea HOM05D000806 ORTHO05D007429 2.6e-79 298.9 171 85.4
BraSC140t45575Z Brassica rapa HOM05D000806 ORTHO05D007429 7.5e-79 297.4 170 85.3
Peaxi162Scf00021g00088 Petunia axillaris HOM05D000806 ORTHO05D007429 8.3e-78 293.9 171 87.1
HanXRQChr16g0528981 Helianthus annuus HOM05D000806 ORTHO05D007429 1.2e-76 290.0 176 79.5
EL10Ac4g09266 Beta vulgaris HOM05D000806 ORTHO05D007429 5.9e-76 287.7 171 83.6
BolSC29t60467H Brassica oleracea HOM05D000806 ORTHO05D007429 6.6e-75 284.3 170 81.2
Hund28839 Selenicereus undatus HOM05D000806 ORTHO05D007429 5.6e-74 281.2 168 82.1
Hund29829 Selenicereus undatus HOM05D000806 ORTHO05D007429 6.1e-73 277.7 168 81.5
AUR62004684 Chenopodium quinoa HOM05D000806 ORTHO05D002320 8.0e-73 277.3 155 85.8
Hund28749 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.7e-70 269.6 168 79.8
Hund31110 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.7e-70 269.6 168 79.8
Thhalv10010960m.g Eutrema salsugineum HOM05D000806 ORTHO05D007429 2.4e-69 265.8 171 78.4
SEGI_09545 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 3.2e-69 265.4 171 75.4
Hund03830 Selenicereus undatus HOM05D000806 ORTHO05D007429 4.6e-68 261.5 168 78.0
Nitab4.5_0007680g0030 Nicotiana tabacum HOM05D000806 ORTHO05D007429 3.0e-67 258.8 157 83.4
Lalb_Chr23g0274521 Lupinus albus HOM05D000806 ORTHO05D007429 3.1e-64 248.8 171 73.7
Lsat_1_v5_gn_9_43721 Lactuca sativa HOM05D000806 ORTHO05D007429 8.9e-64 247.3 154 81.2
Sc03g0009990 Simmondsia chinensis HOM05D000806 ORTHO05D007429 1.7e-62 243.0 130 88.5
Hund28451 Selenicereus undatus HOM05D000806 ORTHO05D007429 2.4e-61 239.2 168 72.6
Peaxi162Scf00041g00229 Petunia axillaris HOM05D000806 ORTHO05D007429 4.1e-61 238.4 118 95.8
HanXRQChr02g0041571 Helianthus annuus HOM05D000806 ORTHO05D007429 2.1e-60 236.1 120 93.3
HanXRQChr10g0284241 Helianthus annuus HOM05D000806 ORTHO05D007429 2.1e-60 236.1 120 93.3
HanXRQChr13g0404911 Helianthus annuus HOM05D000806 ORTHO05D007429 2.1e-60 236.1 120 93.3
Nn010s41444 Nelumbo nucifera HOM05D000806 ORTHO05D007429 7.8e-60 234.2 151 78.8
TAR633G2212 Trochodendron aralioides HOM05D000890 ORTHO05D000697 1.0e-59 233.8 122 90.2
QL93p1043_0001 Quercus lobata HOM05D000806 ORTHO05D007429 2.3e-59 232.6 119 90.8
Sc22g0003430 Simmondsia chinensis HOM05D000806 ORTHO05D007429 1.9e-58 229.6 120 90.0
Hund19837 Selenicereus undatus HOM05D000806 ORTHO05D007429 3.3e-58 228.8 168 69.6
EL10Ac6g15047 Beta vulgaris HOM05D000806 ORTHO05D002324 7.3e-58 227.6 117 90.6
BraSC25t45848Z Brassica rapa HOM05D000806 ORTHO05D007429 7.3e-58 227.6 127 85.8
Gohir.A12G124900 Gossypium hirsutum HOM05D000806 ORTHO05D007429 2.1e-57 226.1 120 90.0
Potri.016G094067 Populus trichocarpa HOM05D000806 ORTHO05D007429 6.2e-57 224.6 119 87.4
Ah.10g027160 Amaranthus hybridus HOM05D000806 ORTHO05D002324 8.1e-57 224.2 117 88.9
HanXRQChr11g0345151 Helianthus annuus HOM05D000806 ORTHO05D007429 8.1e-57 224.2 120 90.0
Eucgr.I02538 Eucalyptus grandis HOM05D000806 ORTHO05D007429 1.2e-55 220.3 120 86.7
Gorai.004G061100 Gossypium raimondii HOM05D000806 ORTHO05D007429 1.2e-55 220.3 154 69.5
Gorai.011G115400 Gossypium raimondii HOM05D000806 ORTHO05D007429 4.4e-55 218.4 127 82.7
Gohir.D10G105733 Gossypium hirsutum HOM05D000806 ORTHO05D007429 7.6e-55 217.6 146 73.3
Haze_07716 Corylus avellana HOM05D000806 ORTHO05D007429 6.4e-54 214.5 124 85.5
HanXRQChr15g0474091 Helianthus annuus HOM05D000806 ORTHO05D007429 6.4e-54 214.5 120 87.5
BolSC46t61035H Brassica oleracea HOM05D000806 ORTHO05D007429 1.4e-53 213.4 120 85.8
BolSC47t61097H Brassica oleracea HOM05D000806 ORTHO05D007429 1.4e-53 213.4 120 85.8
AL2G21550 Arabidopsis lyrata HOM05D000806 ORTHO05D007429 9.2e-53 210.7 119 84.9
HanXRQChr09g0257581 Helianthus annuus HOM05D000806 ORTHO05D007429 7.8e-52 207.6 116 83.6
Hund22773 Selenicereus undatus HOM05D000806 ORTHO05D007429 3.9e-51 205.3 161 67.1
CDE02G2600 Ceratophyllum demersum HOM05D000806 ORTHO05D002320 3.3e-50 202.2 113 83.2
LjContig00318g0003161 Lotus japonicus HOM05D000806 ORTHO05D007429 3.6e-49 198.7 181 57.5
Medtr0002s0680 Medicago truncatula HOM05D000806 ORTHO05D007429 8.1e-49 197.6 172 61.6
Solyc00g500066.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 1.5e-47 193.4 103 91.3
MCO14G322 Micromonas commoda HOM05D000806 ORTHO05D007429 2.6e-47 192.6 168 51.8
Solyc00g500019.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 7.6e-47 191.0 96 95.8
Gohir.1Z049999 Gossypium hirsutum HOM05D000806 ORTHO05D002320 2.2e-46 189.5 98 90.8
Dinv29307 Davidia involucrata HOM05D001133 ORTHO05D000941 2.9e-46 189.1 97 93.8
Sopen07g012430 Solanum pennellii HOM05D000004 ORTHO05D002324 2.9e-46 189.1 94 95.7
Dinv26731 Davidia involucrata HOM05D001133 ORTHO05D000941 6.4e-46 188.0 123 78.9
Gohir.D01G102333 Gossypium hirsutum HOM05D000806 ORTHO05D002320 6.4e-46 188.0 98 89.8
SEGI_10580 Sequoiadendron giganteum HOM05D000580 ORTHO05D001362 1.9e-45 186.4 127 72.4
SEGI_20028 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 5.4e-45 184.9 115 75.7
SEGI_23528 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 5.4e-45 184.9 119 73.1
ECA074G0009 Erigeron canadensis HOM05D000806 ORTHO05D002324 7.1e-45 184.5 95 90.5
ECA077G0001 Erigeron canadensis HOM05D000806 ORTHO05D002324 7.1e-45 184.5 95 90.5
unitig_91.g26508 Utricularia gibba HOM05D000806 ORTHO05D002320 9.3e-45 184.1 163 61.3
Lj2C1239T39 Lonicera japonica HOM05D000806 ORTHO05D002320 1.6e-44 183.3 96 91.7
Cfa021575 Carpinus fangiana HOM05D000806 ORTHO05D002324 3.5e-44 182.2 120 76.7
QL93p0311_0018 Quercus lobata HOM05D000806 ORTHO05D002320 3.5e-44 182.2 97 86.6
Sabra10G0056300 Salix brachista HOM05D000806 ORTHO05D002320 6.0e-44 181.4 123 75.6
SEGI_09273 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 1.7e-43 179.9 113 75.2
EL10As1g23054 Beta vulgaris HOM05D000806 ORTHO05D002324 3.0e-43 179.1 95 87.4
Gohir.A07G166934 Gossypium hirsutum HOM05D000806 ORTHO05D007429 5.1e-43 178.3 92 91.3
Ah.09g227360 Amaranthus hybridus HOM05D000806 ORTHO05D007429 6.6e-43 177.9 98 84.7
SabraPtG0003400 Salix brachista HOM05D000806 ORTHO05D002324 8.7e-43 177.6 120 75.0
CsaV3_UNG209270 Cucumis sativus L. HOM05D000806 ORTHO05D007429 1.1e-42 177.2 94 90.4
Ah.10g027380 Amaranthus hybridus HOM05D000806 ORTHO05D007429 4.3e-42 175.3 94 86.2
HanXRQChr02g0038641 Helianthus annuus HOM05D000806 ORTHO05D007429 9.6e-42 174.1 120 75.0
Hund31091 Selenicereus undatus HOM05D000806 ORTHO05D007429 9.6e-42 174.1 100 83.0
Ah.10g027510 Amaranthus hybridus HOM05D000806 ORTHO05D002324 1.3e-41 173.7 95 84.2
CAN.G1478.9 Capsicum annuum HOM05D000806 ORTHO05D002320 1.6e-41 173.3 120 74.2
Phvul.002G278112 Phaseolus vulgaris HOM05D000806 ORTHO05D007429 2.1e-41 172.9 175 53.1
vmacro22411 Vaccinium macrocarpon HOM05D000806 ORTHO05D007429 4.8e-41 171.8 90 87.8
GSVIVG01030619001 Vitis vinifera HOM05D000806 ORTHO05D007429 4.8e-41 171.8 173 57.8
Oeu062853.1 Olea europaea HOM05D000806 ORTHO05D007429 8.1e-41 171.0 171 57.9
RhsimPtG0003100 Rhododendron simsii HOM05D000806 ORTHO05D002324 8.1e-41 171.0 103 76.7
Ah.03g144240 Amaranthus hybridus HOM05D000806 ORTHO05D002324 1.8e-40 169.9 92 84.8
VMungo0586G0001 Vigna mungo HOM05D000806 ORTHO05D007429 1.8e-40 169.9 179 51.4
Solyc10g045220.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 2.4e-40 169.5 117 73.5
EL10Ac9g20703 Beta vulgaris HOM05D000806 ORTHO05D007429 9.0e-40 167.5 120 66.7
BolSC46t61000H Brassica oleracea HOM05D000806 ORTHO05D007429 1.2e-39 167.2 98 82.7
Medtr4g034770 Medicago truncatula HOM05D000806 ORTHO05D002320 3.4e-39 165.6 173 49.7
Gorai.004G277000 Gossypium raimondii HOM05D000806 ORTHO05D007429 9.9e-39 164.1 87 89.7
Gohir.D11G225901 Gossypium hirsutum HOM05D000806 ORTHO05D007429 3.8e-38 162.2 94 77.7
HanXRQChr08g0210351 Helianthus annuus HOM05D000806 ORTHO05D007429 1.4e-37 160.2 84 89.3
Gohir.1Z050266 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.0e-35 154.1 86 83.7
HanXRQChr02g0044901 Helianthus annuus HOM05D000806 ORTHO05D007429 3.0e-35 152.5 107 72.0
Gorai.012G112600 Gossypium raimondii HOM05D000806 ORTHO05D007429 3.9e-35 152.1 172 52.9
SMO086G0044 Selaginella moellendorffii HOM05D000806 ORTHO05D007429 5.1e-35 151.8 163 49.7
Gohir.D04G129256 Gossypium hirsutum HOM05D000806 ORTHO05D002320 6.6e-35 151.4 88 83.0
Gorai.007G243500 Gossypium raimondii HOM05D000806 ORTHO05D007429 1.9e-34 149.8 91 78.0
Nitab4.5_0009663g0060 Nicotiana tabacum HOM05D000806 ORTHO05D007429 7.3e-34 147.9 73 94.5
Nn3g16863 Nelumbo nucifera HOM05D000806 ORTHO05D007429 1.1e-29 134.0 70 87.1
Hund27898 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.4e-29 133.7 78 80.8
Hund29706 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.4e-29 133.7 78 80.8
Hund29710 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.4e-29 133.7 78 80.8
Hund29827 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.4e-29 133.7 78 80.8
Hund29835 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.4e-29 133.7 78 80.8
Solyc04g039810.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 1.4e-29 133.7 153 52.9
Nitab4.5_0004697g0020 Nicotiana tabacum HOM05D000806 ORTHO05D007429 4.2e-29 132.1 125 59.2
Hund28893 Selenicereus undatus HOM05D000806 ORTHO05D002324 4.2e-29 132.1 77 80.5
Hund29727 Selenicereus undatus HOM05D000806 ORTHO05D002324 4.2e-29 132.1 77 80.5
Hund29858 Selenicereus undatus HOM05D000806 ORTHO05D002324 4.2e-29 132.1 77 80.5
Hund29866 Selenicereus undatus HOM05D000806 ORTHO05D002324 4.2e-29 132.1 77 80.5
Hund30695 Selenicereus undatus HOM05D000806 ORTHO05D002324 4.2e-29 132.1 77 80.5
BraA10t43926Z Brassica rapa HOM05D000806 ORTHO05D007429 1.6e-28 130.2 81 76.5
EL10As15g24119 Beta vulgaris HOM05D000806 ORTHO05D002320 8.7e-27 124.4 96 64.6
Hund10571 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.5e-23 113.6 123 51.2
Lalb_Chr25g0282881 Lupinus albus HOM05D000806 ORTHO05D007429 4.5e-23 112.1 64 85.9
SEGI_39120 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 4.5e-23 112.1 70 71.4
Nn021s41539 Nelumbo nucifera HOM05D000806 ORTHO05D007429 2.2e-22 109.8 123 52.0
arahy.Tifrunner.gnm1.ann1.YJGE71 Arachis hypogaea HOM05D000806 ORTHO05D007429 4.9e-22 108.6 62 80.6
Sed0021403 Sechium edule HOM05D000806 ORTHO05D002324 1.9e-21 106.7 61 83.6
Nn1g07435 Nelumbo nucifera HOM05D000806 ORTHO05D007429 2.5e-21 106.3 82 64.6
FAN12G3683 Fragaria x ananassa HOM05D000681 ORTHO05D035426 4.2e-21 105.5 91 61.5
arahy.Tifrunner.gnm1.ann1.Y8HZNS Arachis hypogaea HOM05D000806 ORTHO05D002320 1.0e-19 100.9 62 80.6
HanXRQChr09g0267831 Helianthus annuus HOM05D000806 ORTHO05D007429 1.3e-19 100.5 60 78.3
CDE02G0843 Ceratophyllum demersum HOM05D001966 ORTHO05D007227 3.0e-19 99.4 62 74.2
HanXRQChr11g0337941 Helianthus annuus HOM05D000806 ORTHO05D007429 3.9e-19 99.0 74 62.2
Nitab4.5_0010235g0030 Nicotiana tabacum HOM05D000806 ORTHO05D007429 3.9e-19 99.0 78 62.8
Solyc05g016120.2 Solanum lycopersicum HOM05D001387 ORTHO05D001250 3.9e-19 99.0 104 51.9
arahy.Tifrunner.gnm1.ann1.X4SEM1 Arachis hypogaea HOM05D000540 ORTHO05D000681 3.3e-18 95.9 61 78.7
BolC9t58296H Brassica oleracea HOM05D000806 ORTHO05D007429 5.7e-18 95.1 64 73.4
ATR1137G001 Amborella trichopoda HOM05D000806 ORTHO05D007429 1.6e-17 93.6 55 81.8
Nitab4.5_0002181g0020 Nicotiana tabacum HOM05D006976 ORTHO05D008761 1.6e-17 93.6 131 46.6
Ah.10g027920 Amaranthus hybridus HOM05D000806 ORTHO05D002324 2.8e-17 92.8 53 81.1
Ah.10g028630 Amaranthus hybridus HOM05D000806 ORTHO05D002324 2.8e-17 92.8 53 81.1
FAN17G0466 Fragaria x ananassa HOM05D000806 ORTHO05D007429 4.1e-16 89.0 93 51.6
EL10As15g24117 Beta vulgaris HOM05D000806 ORTHO05D007429 9.0e-16 87.8 52 76.9
TAR371G0631 Trochodendron aralioides HOM05D000806 ORTHO05D007429 2.6e-15 86.3 49 83.7
CAN.G1163.7 Capsicum annuum HOM05D000806 ORTHO05D007429 3.8e-14 82.4 57 75.4
BolC9t55821H Brassica oleracea HOM05D000806 ORTHO05D007429 4.2e-13 79.0 46 78.3
BolSC29t60589H Brassica oleracea HOM05D000806 ORTHO05D007429 5.5e-13 78.6 46 80.4
MD15G1388400 Malus domestica HOM05D000806 ORTHO05D007429 1.0e-11 74.3 48 79.2
Hund08021 Selenicereus undatus HOM05D002432 ORTHO05D000695 1.0e-11 74.3 49 73.5
Sed0010807 Sechium edule HOM05D000806 ORTHO05D002320 1.5e-10 70.5 33 93.9
Sed0026664 Sechium edule HOM05D000806 ORTHO05D002320 1.5e-10 70.5 33 93.9
SEGI_02123 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 1.5e-10 70.5 49 69.4
SGA_v2.0_scaffold213G42216 Striga asiatica HOM05D000806 ORTHO05D007429 1.3e-09 67.4 36 83.3
SEGI_16956 Sequoiadendron giganteum HOM05D000216 ORTHO05D001131 1.6e-09 67.0 49 69.4
ClCG04G004710 Citrullus lanatus HOM05D001966 ORTHO05D007429 4.8e-09 65.5 32 90.6
Migut.H00990 Erythranthe guttata HOM05D000806 ORTHO05D007429 1.1e-08 64.3 36 88.9
FAN07G1499 Fragaria x ananassa HOM05D000806 ORTHO05D007429 6.5e-06 55.1 54 51.9


User provided reference genes

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