Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E01271 Erythranthe guttata HOM05D003763 ORTHO05D004315 2.9e-161 572.0 324 100.0
Migut.E01022 Erythranthe guttata HOM05D003763 ORTHO05D004315 2.4e-160 568.9 324 99.4
SalBow6G0972 Salvia bowleyana HOM05D003763 ORTHO05D004315 1.4e-136 490.0 324 85.8
MSTRG.13805 Avicennia marina HOM05D003763 ORTHO05D004315 3.2e-136 488.8 326 84.0
Migut.A00895 Erythranthe guttata HOM05D003763 ORTHO05D004315 5.3e-131 471.5 319 84.0
Oeu056817.1 Olea europaea HOM05D003763 ORTHO05D004315 9.1e-131 470.7 332 82.2
Lsat_1_v5_gn_6_78800 Lactuca sativa HOM05D003763 ORTHO05D004315 3.8e-129 465.3 327 80.4
Dinv37708 Davidia involucrata HOM05D003763 ORTHO05D004315 8.5e-129 464.2 324 81.2
Sopen08g028400 Solanum pennellii HOM05D003763 ORTHO05D004315 1.5e-125 453.4 325 80.3
CAN.G981.62 Capsicum annuum HOM05D003763 ORTHO05D004315 2.6e-125 452.6 327 81.3
DCAR_000890 Daucus carota HOM05D003763 ORTHO05D004315 4.4e-125 451.8 321 81.0
TAR629G0773 Trochodendron aralioides HOM05D003763 ORTHO05D004315 9.7e-125 450.7 327 78.6
PGSC0003DMG400022731 Solanum tuberosum HOM05D003763 ORTHO05D004315 1.7e-124 449.9 325 79.4
Manes.01G070000 Manihot esculenta HOM05D003763 ORTHO05D004315 3.7e-124 448.7 325 79.4
Nitab4.5_0010547g0050 Nicotiana tabacum HOM05D003763 ORTHO05D004315 3.7e-124 448.7 332 79.5
Sopen08g003700 Solanum pennellii HOM05D003763 ORTHO05D004315 8.2e-124 447.6 324 80.9
TAR622G0836 Trochodendron aralioides HOM05D003763 ORTHO05D004315 1.1e-123 447.2 335 77.0
unitig_52.g17229 Utricularia gibba HOM05D003763 ORTHO05D004315 1.8e-123 446.4 315 82.5
GSVIVG01019890001 Vitis vinifera HOM05D003763 ORTHO05D004315 3.1e-123 445.7 327 78.9
Hma1.2p1_0138F.1_g062780 Hydrangea macrophylla HOM05D003763 ORTHO05D004315 4.1e-123 445.3 334 76.0
CSS0018103 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 9.1e-123 444.1 328 77.4
Cfa012069 Carpinus fangiana HOM05D003763 ORTHO05D004315 3.5e-122 442.2 327 77.4
Peaxi162Scf00102g01354 Petunia axillaris HOM05D003763 ORTHO05D004315 3.5e-122 442.2 326 78.5
CSS0001568 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 1.7e-121 439.9 321 79.1
PGSC0003DMG400012494 Solanum tuberosum HOM05D003763 ORTHO05D004315 1.7e-121 439.9 326 80.1
Lj4g0003870 Lotus japonicus HOM05D003763 ORTHO05D004315 8.5e-121 437.6 325 77.5
Oeu021144.1 Olea europaea HOM05D003763 ORTHO05D004315 1.1e-120 437.2 284 87.7
vmacro14015 Vaccinium macrocarpon HOM05D003763 ORTHO05D004315 1.1e-120 437.2 340 75.3
Cc08_g13730 Coffea canephora HOM05D003763 ORTHO05D004315 1.4e-120 436.8 325 78.5
Potri.001G113000 Populus trichocarpa HOM05D003763 ORTHO05D004315 3.2e-120 435.6 330 77.3
CAN.G1394.10 Capsicum annuum HOM05D003763 ORTHO05D004315 4.2e-120 435.3 324 78.1
COL.COLO4_23800 Corchorus olitorius HOM05D003763 ORTHO05D004315 4.2e-120 435.3 325 78.2
Duzib205G0169 Durio zibethinus HOM05D003763 ORTHO05D004315 1.2e-119 433.7 324 78.1
SalBow1G0491 Salvia bowleyana HOM05D003763 ORTHO05D004315 2.7e-119 432.6 320 80.6
Thecc.03G267900 Theobroma cacao HOM05D003763 ORTHO05D004315 4.7e-119 431.8 324 77.2
Gohir.D08G195200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 1.4e-118 430.3 326 77.3
Lsat_1_v5_gn_6_8180 Lactuca sativa HOM05D003763 ORTHO05D004315 1.4e-118 430.3 330 74.5
CANSAT21G0452 Cannabis sativa HOM05D003763 ORTHO05D004315 3.0e-118 429.1 325 76.9
Duzib084G0949 Durio zibethinus HOM05D003763 ORTHO05D004315 3.0e-118 429.1 324 76.5
Sabra03G0083200 Salix brachista HOM05D003763 ORTHO05D004315 3.0e-118 429.1 325 76.3
Potri.003G119200 Populus trichocarpa HOM05D003763 ORTHO05D004315 3.9e-118 428.7 328 76.8
Lalb_Chr05g0214701 Lupinus albus HOM05D003763 ORTHO05D004315 1.1e-117 427.2 326 77.0
Sc22g0000420 Simmondsia chinensis HOM05D003763 ORTHO05D004315 1.1e-117 427.2 327 75.5
TWI60G0957 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 1.5e-117 426.8 325 76.3
Cpa.g.sc29.40 Carica papaya HOM05D003763 ORTHO05D004315 7.4e-117 424.5 324 74.4
Sed0026462 Sechium edule HOM05D003763 ORTHO05D004315 7.4e-117 424.5 324 74.7
Atru.chr9.1500 Acer truncatum HOM05D003763 ORTHO05D004315 1.3e-116 423.7 326 77.9
ECA240G4155 Erigeron canadensis HOM05D003763 ORTHO05D004315 1.3e-116 423.7 328 75.6
HanXRQChr13g0414021 Helianthus annuus HOM05D003763 ORTHO05D004315 1.3e-116 423.7 327 75.8
CsaV3_3G003430 Cucumis sativus L. HOM05D003763 ORTHO05D004315 4.8e-116 421.8 320 75.9
Phvul.003G213900 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 1.1e-115 420.6 328 75.6
Ca_20236_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 1.4e-115 420.2 326 76.4
Gorai.004G206000 Gossypium raimondii HOM05D003763 ORTHO05D004315 1.4e-115 420.2 328 75.0
Glyma.05G051300 Glycine max HOM05D003763 ORTHO05D004315 1.8e-115 419.9 327 75.8
Rhsim07G0096500 Rhododendron simsii HOM05D003763 ORTHO05D004315 1.8e-115 419.9 380 68.4
TWI81G0532 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 1.8e-115 419.9 325 75.1
arahy.Tifrunner.gnm1.ann1.QN4KPS Arachis hypogaea HOM05D003763 ORTHO05D004315 2.4e-115 419.5 336 75.0
Ah.12g057870 Amaranthus hybridus HOM05D003763 ORTHO05D004315 5.3e-115 418.3 331 76.4
Nn1g01278 Nelumbo nucifera HOM05D003763 ORTHO05D004315 1.6e-114 416.8 322 76.7
Prupe.5G086900 Prunus persica HOM05D003763 ORTHO05D004315 1.6e-114 416.8 325 75.4
MD04G1071000 Malus domestica HOM05D003763 ORTHO05D004315 2.0e-114 416.4 327 74.9
MELO3C014009.2 Cucumis melo HOM05D003763 ORTHO05D004315 4.5e-114 415.2 325 74.5
THA.LOC104814132 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 4.5e-114 415.2 325 73.8
EL10Ac5g12684 Beta vulgaris HOM05D003763 ORTHO05D004315 7.7e-114 414.5 331 75.2
Glyma.17G133200 Glycine max HOM05D003763 ORTHO05D004315 1.0e-113 414.1 330 73.9
PSO782G5713 Papaver somniferum HOM05D003763 ORTHO05D004315 1.0e-113 414.1 324 75.6
VMungo1215G1438 Vigna mungo HOM05D003763 ORTHO05D004315 1.0e-113 414.1 325 72.9
Glyma.01G214300 Glycine max HOM05D003763 ORTHO05D004315 1.7e-113 413.3 324 74.7
PSO478G4698 Papaver somniferum HOM05D003763 ORTHO05D004315 2.2e-113 412.9 324 75.9
CiPaw.12G101000 Carya illinoinensis HOM05D003763 ORTHO05D004315 2.9e-113 412.5 331 75.5
Solyc08g080050.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 2.9e-113 412.5 299 80.9
Nitab4.5_0002886g0120 Nicotiana tabacum HOM05D003763 ORTHO05D004315 5.0e-113 411.8 306 71.9
Aqoxy7G00504 Aquilegia oxysepala HOM05D003763 ORTHO05D004315 6.5e-113 411.4 327 74.3
FAN04G0845 Fragaria x ananassa HOM05D003763 ORTHO05D004315 6.5e-113 411.4 328 75.3
Ciclev10021127m.g Citrus clementina HOM05D003763 ORTHO05D004315 8.5e-113 411.0 329 73.6
FvH4_5g01180 Fragaria vesca HOM05D003763 ORTHO05D004315 1.1e-112 410.6 329 75.7
FAN18G3786 Fragaria x ananassa HOM05D003763 ORTHO05D004315 2.5e-112 409.5 331 74.9
FAN13G2490 Fragaria x ananassa HOM05D003763 ORTHO05D004315 4.2e-112 408.7 329 75.1
THA.LOC104806356 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 4.2e-112 408.7 326 74.2
Phvul.002G152800 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 5.5e-112 408.3 327 72.5
AUR62017330 Chenopodium quinoa HOM05D003763 ORTHO05D004315 1.2e-111 407.1 327 74.3
FAN08G0919 Fragaria x ananassa HOM05D003763 ORTHO05D004315 1.2e-111 407.1 327 75.2
Gorai.008G242200 Gossypium raimondii HOM05D003763 ORTHO05D004315 1.2e-111 407.1 324 74.4
Hund14702 Selenicereus undatus HOM05D003763 ORTHO05D004315 1.2e-111 407.1 328 75.6
VMungo1215G3348 Vigna mungo HOM05D003763 ORTHO05D004315 1.2e-111 407.1 358 68.7
AUR62010559 Chenopodium quinoa HOM05D003763 ORTHO05D004315 2.1e-111 406.4 327 74.3
Aa31LG6G4960 Aethionema arabicum HOM05D003763 ORTHO05D004315 4.7e-111 405.2 329 72.0
Gohir.D12G226200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 4.7e-111 405.2 324 74.1
Psat4g068320 Pisum sativum HOM05D003763 ORTHO05D004315 8.0e-111 404.4 323 71.8
Sed0016409 Sechium edule HOM05D003763 ORTHO05D004315 1.0e-110 404.1 325 72.6
Solyc08g007770.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 1.4e-110 403.7 299 80.9
arahy.Tifrunner.gnm1.ann1.HFU20B Arachis hypogaea HOM05D003763 ORTHO05D004315 2.3e-110 402.9 331 74.9
A03p29510 Brassica napus HOM05D003763 ORTHO05D004315 3.0e-110 402.5 325 73.5
BraA03t12145Z Brassica rapa HOM05D003763 ORTHO05D004315 3.0e-110 402.5 325 73.5
Sp7g20960 Schrenkiella parvula HOM05D003763 ORTHO05D004315 4.0e-110 402.1 326 72.1
Medtr4g102440 Medicago truncatula HOM05D003763 ORTHO05D004315 5.2e-110 401.7 322 75.2
AT4G22890 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 8.8e-110 401.0 326 72.7
Sp6g05550 Schrenkiella parvula HOM05D003763 ORTHO05D004315 1.2e-109 400.6 328 72.6
A03p53850 Brassica napus HOM05D003763 ORTHO05D004315 1.5e-109 400.2 325 71.7
arahy.Tifrunner.gnm1.ann1.RZ3A35 Arachis hypogaea HOM05D003763 ORTHO05D004315 2.6e-109 399.4 332 73.8
Thhalv10028695m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 2.6e-109 399.4 326 73.6
TPR.G37646 Trifolium pratense HOM05D003763 ORTHO05D004315 2.6e-109 399.4 338 71.9
BolC7t45719H Brassica oleracea HOM05D003763 ORTHO05D004315 5.7e-109 398.3 325 71.4
Thhalv10025739m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 5.7e-109 398.3 325 72.9
Eucgr.D01944 Eucalyptus grandis HOM05D003763 ORTHO05D004315 7.5e-109 397.9 333 71.5
C07p52250 Brassica napus HOM05D003763 ORTHO05D004315 9.7e-109 397.5 325 71.1
Actinidia27416 Actinidia chinensis HOM05D003763 ORTHO05D004315 2.2e-108 396.4 259 86.9
Carub.0007s1839 Capsella rubella HOM05D003763 ORTHO05D004315 3.7e-108 395.6 325 72.0
BolC3t15881H Brassica oleracea HOM05D003763 ORTHO05D004315 4.8e-108 395.2 325 72.9
Aa31LG9G10510 Aethionema arabicum HOM05D003763 ORTHO05D004315 6.3e-108 394.8 328 71.6
RcHm_v2.0_Chr7g0199911 Rosa chinensis HOM05D003763 ORTHO05D004315 6.3e-108 394.8 328 73.2
BcaC01g04611 Brassica carinata HOM05D003763 ORTHO05D004315 1.1e-107 394.0 324 72.2
C03p35720 Brassica napus HOM05D003763 ORTHO05D004315 1.1e-107 394.0 324 72.2
BcaB01g02662 Brassica carinata HOM05D003763 ORTHO05D004315 7.0e-107 391.3 324 71.9
HanXRQChr03g0084111 Helianthus annuus HOM05D003763 ORTHO05D004315 2.7e-106 389.4 308 74.7
CDE04G2291 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 3.5e-106 389.0 311 74.3
Ca_24565_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 3.5e-106 389.0 326 72.1
A01p14110 Brassica napus HOM05D003763 ORTHO05D004315 4.5e-106 388.7 321 71.3
BraA01t01359Z Brassica rapa HOM05D003763 ORTHO05D004315 4.5e-106 388.7 321 71.3
BcaC09g51065 Brassica carinata HOM05D003763 ORTHO05D004315 1.0e-105 387.5 321 71.0
CARHR254330 Cardamine hirsuta HOM05D003763 ORTHO05D004315 2.2e-105 386.3 324 71.3
Medtr5g011220 Medicago truncatula HOM05D003763 ORTHO05D004315 2.2e-105 386.3 303 74.6
C01p17370 Brassica napus HOM05D003763 ORTHO05D004315 5.0e-105 385.2 321 70.7
BolC1t01675H Brassica oleracea HOM05D003763 ORTHO05D004315 5.0e-105 385.2 321 70.7
ClCG00G002290 Citrullus lanatus HOM05D003763 ORTHO05D004315 8.5e-105 384.4 300 74.7
Nitab4.5_0001200g0070 Nicotiana tabacum HOM05D003763 ORTHO05D004315 1.5e-104 383.6 256 77.0
BcaNung01019 Brassica carinata HOM05D003763 ORTHO05D004315 1.9e-104 383.3 322 70.8
BcaNung01664 Brassica carinata HOM05D003763 ORTHO05D004315 3.2e-104 382.5 277 78.0
CARHR229930 Cardamine hirsuta HOM05D003763 ORTHO05D004315 4.2e-104 382.1 324 70.7
AT4G11960 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 9.4e-104 380.9 320 71.2
Lj8C243T4 Lonicera japonica HOM05D003763 ORTHO05D004315 2.7e-103 379.4 261 85.8
PGR031G0886 Punica granatum HOM05D003763 ORTHO05D004315 8.0e-103 377.9 327 72.5
AL6G46730 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 1.0e-102 377.5 320 71.2
Carub.0006s3106 Capsella rubella HOM05D003763 ORTHO05D004315 1.8e-102 376.7 326 69.6
Lj2A202G55 Lonicera japonica HOM05D003763 ORTHO05D004315 2.0e-101 373.2 273 76.9
Nitab4.5_0003274g0090 Nicotiana tabacum HOM05D003763 ORTHO05D004315 3.4e-101 372.5 325 63.1
Lj2g0000892 Lotus japonicus HOM05D003763 ORTHO05D004315 9.8e-101 370.9 326 69.9
BraA03t14454Z Brassica rapa HOM05D003763 ORTHO05D004315 1.1e-99 367.5 301 72.4
ATR0661G459 Amborella trichopoda HOM05D003763 ORTHO05D004315 5.9e-98 361.7 277 74.4
Zm00001eb064990 Zea mays HOM05D003763 ORTHO05D004315 4.2e-96 355.5 317 68.1
Haze_08989 Corylus avellana HOM05D003763 ORTHO05D004315 2.8e-95 352.8 304 71.4
Peaxi162Scf00620g00056 Petunia axillaris HOM05D003763 ORTHO05D004315 1.4e-94 350.5 358 63.1
arahy.Tifrunner.gnm1.ann1.N69HTX Arachis hypogaea HOM05D003763 ORTHO05D004315 8.9e-94 347.8 336 66.7
Gohir.A08G176900 Gossypium hirsutum HOM05D003763 ORTHO05D004315 1.2e-93 347.4 231 87.9
Os03g0857400 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 2.0e-93 346.7 315 68.3
Actinidia14012 Actinidia chinensis HOM05D003763 ORTHO05D004315 8.3e-92 341.3 227 87.7
AL7G30630 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 5.9e-90 335.1 231 83.5
Mapoly0048s0082 Marchantia polymorpha HOM05D003763 ORTHO05D004315 1.5e-88 330.5 294 66.7
ClCG00G000150 Citrullus lanatus HOM05D003763 ORTHO05D004315 9.5e-88 327.8 324 63.3
ClCG10G003400 Citrullus lanatus HOM05D003763 ORTHO05D004315 9.5e-88 327.8 324 63.3
unitig_699.g19760 Utricularia gibba HOM05D003763 ORTHO05D004315 1.6e-87 327.0 252 80.6
SEGI_18243 Sequoiadendron giganteum HOM05D003763 ORTHO05D004315 8.3e-84 314.7 272 63.6
Dinv39038 Davidia involucrata HOM05D003763 ORTHO05D004315 7.3e-80 301.6 246 77.2
AagrBONN_evm.TU.Sc2ySwM_362.2619 Anthoceros agrestis HOM05D003763 ORTHO05D004315 2.8e-79 299.7 252 61.5
Pp3c10_15390 Physcomitrium patens HOM05D003763 ORTHO05D004315 3.6e-79 299.3 273 63.7
Actinidia05236 Actinidia chinensis HOM05D003763 ORTHO05D004315 5.2e-78 295.4 275 61.8
CiPaw.11G143200 Carya illinoinensis HOM05D003763 ORTHO05D004315 7.1e-75 285.0 235 75.3
SMO356G0021 Selaginella moellendorffii HOM05D003763 ORTHO05D004315 7.8e-74 281.6 250 57.6
Psat2g180880 Pisum sativum HOM05D003763 ORTHO05D004315 1.1e-72 277.7 255 70.6
Psat6g136800 Pisum sativum HOM05D003763 ORTHO05D004315 2.2e-68 263.5 196 79.1
MSTRG.12034 Avicennia marina HOM05D003763 ORTHO05D004315 4.9e-60 235.7 191 79.6
Cre07.g340200 Chlamydomonas reinhardtii HOM05D003763 ORTHO05D004315 9.6e-56 221.5 290 47.6
CBR_g23735 Chara braunii HOM05D003763 ORTHO05D004315 1.3e-55 221.1 287 43.2
Zm00001eb065010 Zea mays HOM05D003763 ORTHO05D004315 1.4e-54 217.6 149 74.5
CDE07G1293 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 7.1e-51 205.3 125 82.4
Glyma.12G170600 Glycine max HOM05D003763 ORTHO05D004315 1.0e-49 201.4 149 71.1
Gohir.A12G223632 Gossypium hirsutum HOM05D003763 ORTHO05D004315 3.3e-48 196.4 124 78.2
CDE07G1747 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 6.0e-42 175.6 208 60.1
Gohir.A12G223566 Gossypium hirsutum HOM05D003763 ORTHO05D004315 9.6e-40 168.3 138 65.2
HPP92_014954 Vanilla planifolia HOM05D003763 ORTHO05D004315 2.5e-35 153.7 100 80.0
Actinidia02868 Actinidia chinensis HOM05D003763 ORTHO05D004315 1.1e-32 144.8 261 38.7
Lsat_1_v5_gn_8_1701 Lactuca sativa HOM05D003763 ORTHO05D004315 1.5e-32 144.4 96 72.9
Zm00001eb305640 Zea mays HOM05D003763 ORTHO05D004315 1.8e-30 137.5 88 73.9
TPR.G14577 Trifolium pratense HOM05D003763 ORTHO05D004315 6.9e-30 135.6 108 73.1
Zm00001eb065020 Zea mays HOM05D003763 ORTHO05D004315 2.3e-25 120.6 88 72.7
BcaC02g09855 Brassica carinata HOM05D003763 ORTHO05D004315 3.8e-20 103.2 157 51.6
Pp3c3_19870 Physcomitrium patens HOM05D003763 ORTHO05D004315 1.8e-17 94.4 107 66.4
Os08g0526300 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 1.5e-16 91.3 83 81.9
C04p35880 Brassica napus HOM05D003763 ORTHO05D004315 5.7e-16 89.4 158 50.6
TPR.G23383 Trifolium pratense HOM05D003424 ORTHO05D004025 8.2e-15 85.5 122 46.7
arahy.Tifrunner.gnm1.ann1.AG3Z3P Arachis hypogaea HOM05D003763 ORTHO05D004315 1.5e-08 64.7 93 41.9
CAN.G835.4 Capsicum annuum HOM05D000091 ORTHO05D003679 4.1e-06 56.6 36 83.3


User provided reference genes

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