Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g071320 Medicago truncatula HOM05D000216 ORTHO05D000634 6.3e-45 183.7 92 100.0
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 3.5e-27 124.8 67 89.6
Lalb_Chr09g0335361 Lupinus albus HOM05D000216 ORTHO05D000634 3.0e-23 111.7 66 81.8
MELO3C000330.2 Cucumis melo HOM05D000216 ORTHO05D000634 5.2e-23 110.9 75 70.7
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 5.2e-23 110.9 83 67.5
ClCG07G007330 Citrullus lanatus HOM05D000216 ORTHO05D000634 6.3e-21 104.0 64 75.0
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 6.3e-21 104.0 75 66.7
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 6.3e-21 104.0 75 68.0
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 6.3e-21 104.0 75 68.0
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 1.1e-20 103.2 76 65.8
arahy.Tifrunner.gnm1.ann1.F2PHFK Arachis hypogaea HOM05D000890 ORTHO05D000697 1.2e-19 99.8 77 62.3
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 1.6e-19 99.4 82 62.2
Nn3g18112 Nelumbo nucifera HOM05D000216 ORTHO05D000634 4.5e-19 97.8 80 61.2
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 4.5e-19 97.8 67 68.7
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 1.3e-18 96.3 67 68.7
Lj2C1238G20 Lonicera japonica HOM05D000216 ORTHO05D000634 1.3e-18 96.3 67 68.7
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 2.2e-18 95.5 81 61.7
MSTRG.17791 Avicennia marina HOM05D000216 ORTHO05D000634 8.5e-18 93.6 67 68.7
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 2.5e-17 92.0 66 66.7
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 3.2e-17 91.7 67 64.2
Hma1.2p1_0414F.1_g147670 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 3.2e-17 91.7 67 67.2
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 5.5e-17 90.9 68 66.2
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 1.2e-16 89.7 67 65.7
Ah.10g027800 Amaranthus hybridus HOM05D000216 ORTHO05D000634 1.2e-16 89.7 67 65.7
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 1.6e-16 89.4 67 62.7
BolSC29t60451H Brassica oleracea HOM05D000216 ORTHO05D000634 1.6e-16 89.4 67 62.7
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 1.6e-16 89.4 67 62.7
BraSC143t45681Z Brassica rapa HOM05D000216 ORTHO05D000634 1.6e-16 89.4 67 62.7
BraSC58t46405Z Brassica rapa HOM05D000216 ORTHO05D000634 1.6e-16 89.4 67 62.7
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 1.6e-16 89.4 67 61.2
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.1e-16 89.0 71 63.4
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.1e-16 89.0 71 63.4
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.1e-16 89.0 71 63.4
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.1e-16 89.0 71 63.4
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.1e-16 89.0 71 63.4
Hund03956 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.6e-16 88.2 66 65.2
Hund07969 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.6e-16 88.2 66 65.2
Hund18043 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.6e-16 88.2 66 65.2
Hund25862 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.6e-16 88.2 66 65.2
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.6e-16 88.2 66 65.2
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.6e-16 88.2 66 65.2
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.6e-16 88.2 66 65.2
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.6e-16 88.2 66 65.2
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.6e-16 88.2 66 65.2
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.6e-16 88.2 66 65.2
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.6e-16 88.2 66 65.2
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.6e-16 88.2 66 65.2
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.6e-16 88.2 66 65.2
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 4.7e-16 87.8 68 60.3
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 4.7e-16 87.8 67 62.7
Hund31462 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.1e-16 87.4 66 65.2
Thhalv10023328m.g Eutrema salsugineum HOM05D000216 ORTHO05D000634 1.0e-15 86.7 88 52.3
Nitab4.5_0000172g0280 Nicotiana tabacum HOM05D000216 ORTHO05D000634 2.0e-14 82.4 72 55.6
SGA_v2.0_scaffold119G32689 Striga asiatica HOM05D000216 ORTHO05D000634 1.3e-13 79.7 69 59.4
Hund15943 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-13 78.2 75 54.7
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.3e-13 77.4 66 62.1
Nitab4.5_0001761g0170 Nicotiana tabacum HOM05D000216 ORTHO05D000634 1.4e-12 76.3 59 59.3
Lalb_Chr06g0173011 Lupinus albus HOM05D000216 ORTHO05D000634 4.1e-12 74.7 57 64.9
Medtr7g116700 Medicago truncatula HOM05D000216 ORTHO05D000634 3.3e-09 65.1 38 81.6
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 9.5e-09 63.5 57 54.4
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 9.5e-09 63.5 57 54.4
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 9.5e-09 63.5 57 54.4
HanXRQChr00c0300g0573181 Helianthus annuus HOM05D000216 ORTHO05D000634 1.2e-08 63.2 47 61.7
Lsat_1_v5_gn_5_26601 Lactuca sativa HOM05D000216 ORTHO05D000634 1.2e-08 63.2 57 54.4
BraSC140t45608Z Brassica rapa HOM05D000216 ORTHO05D000634 2.8e-08 62.0 40 65.0
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 4.7e-08 61.2 66 53.0
Zm00001eb271610 Zea mays HOM05D000216 ORTHO05D000634 4.7e-08 61.2 52 50.0
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 4.7e-08 61.2 52 50.0
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 1.8e-07 59.3 40 70.0
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 6.8e-07 57.4 71 39.4
ClCG01G011270 Citrullus lanatus HOM05D000216 ORTHO05D000634 1.2e-06 56.6 30 86.7
CsaV3_UNG207810 Cucumis sativus L. HOM05D000216 ORTHO05D000634 2.6e-06 55.5 29 86.2
HanXRQChr00c0313g0573471 Helianthus annuus HOM05D000216 ORTHO05D000634 3.4e-06 55.1 46 56.5
Medtr3g450720 Medicago truncatula HOM05D000216 ORTHO05D000634 5.7e-06 54.3 25 100.0


User provided reference genes

Program Settings