Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr3g037450 Medicago truncatula HOM05D003878 ORTHO05D003857 2.9e-31 137.9 67 100.0
Prupe.5G197900 Prunus persica HOM05D003878 ORTHO05D003857 2.4e-09 65.1 47 72.3
Oeu047002.2 Olea europaea HOM05D003878 ORTHO05D003857 4.0e-09 64.3 47 70.2
Cc04_g14990 Coffea canephora HOM05D003878 ORTHO05D003857 9.0e-09 63.2 43 76.7
Migut.I00209 Erythranthe guttata HOM05D003878 ORTHO05D003857 1.5e-08 62.4 43 76.7
DCAR_016576 Daucus carota HOM05D003878 ORTHO05D003857 2.0e-08 62.0 48 66.7
Solyc06g069690.4 Solanum lycopersicum HOM05D003878 ORTHO05D003857 2.6e-08 61.6 43 72.1
Sopen06g026990 Solanum pennellii HOM05D003878 ORTHO05D003857 2.6e-08 61.6 43 72.1
PGSC0003DMG400033048 Solanum tuberosum HOM05D003878 ORTHO05D003857 2.6e-08 61.6 43 72.1
HPP92_009069 Vanilla planifolia HOM05D003878 ORTHO05D003857 2.6e-08 61.6 58 58.6
MSTRG.4440 Avicennia marina HOM05D003878 ORTHO05D003857 3.4e-08 61.2 44 72.7
Ca_14691_v3 Cicer arietinum L. HOM05D003878 ORTHO05D003857 3.4e-08 61.2 43 76.7
Ca_30947_v3 Cicer arietinum L. HOM05D003878 ORTHO05D003857 3.4e-08 61.2 43 76.7
Migut.D01764 Erythranthe guttata HOM05D003878 ORTHO05D003857 3.4e-08 61.2 43 74.4
Psat5g199360 Pisum sativum HOM05D003878 ORTHO05D003857 3.4e-08 61.2 43 76.7
arahy.Tifrunner.gnm1.ann1.2F1UPX Arachis hypogaea HOM05D003878 ORTHO05D003857 4.5e-08 60.8 43 74.4
arahy.Tifrunner.gnm1.ann1.D90B1M Arachis hypogaea HOM05D003878 ORTHO05D003857 4.5e-08 60.8 43 74.4
Duzib068G0503 Durio zibethinus HOM05D003878 ORTHO05D003857 4.5e-08 60.8 45 71.1
Solyc03g115770.3 Solanum lycopersicum HOM05D003878 ORTHO05D003857 4.5e-08 60.8 44 70.5
Sopen03g034750 Solanum pennellii HOM05D003878 ORTHO05D003857 4.5e-08 60.8 44 70.5
PGSC0003DMG400019518 Solanum tuberosum HOM05D003878 ORTHO05D003857 4.5e-08 60.8 44 70.5
Gohir.A03G067700 Gossypium hirsutum HOM05D003878 ORTHO05D003857 5.8e-08 60.5 45 68.9
Gohir.D03G094200 Gossypium hirsutum HOM05D003878 ORTHO05D003857 5.8e-08 60.5 45 68.9
Gorai.003G098300 Gossypium raimondii HOM05D003878 ORTHO05D003857 5.8e-08 60.5 45 68.9
TAR369G0188 Trochodendron aralioides HOM05D003878 ORTHO05D003857 5.8e-08 60.5 43 74.4
TAR625G0726 Trochodendron aralioides HOM05D003878 ORTHO05D003857 5.8e-08 60.5 43 74.4
Ciclev10019534m.g Citrus clementina HOM05D003878 ORTHO05D003857 7.6e-08 60.1 43 74.4
COL.COLO4_36941 Corchorus olitorius HOM05D003878 ORTHO05D003857 7.6e-08 60.1 43 74.4
Dinv38743 Davidia involucrata HOM05D003878 ORTHO05D003857 7.6e-08 60.1 43 74.4
Glyma.04G166300 Glycine max HOM05D003878 ORTHO05D003857 7.6e-08 60.1 43 74.4
Gohir.D07G083200 Gossypium hirsutum HOM05D003878 ORTHO05D003857 7.6e-08 60.1 44 70.5
Gohir.D11G114700 Gossypium hirsutum HOM05D003878 ORTHO05D003857 7.6e-08 60.1 44 70.5
Gohir.D13G087700 Gossypium hirsutum HOM05D003878 ORTHO05D003857 7.6e-08 60.1 44 70.5
Gorai.001G126800 Gossypium raimondii HOM05D003878 ORTHO05D003857 7.6e-08 60.1 44 70.5
Gorai.005G145700 Gossypium raimondii HOM05D003878 ORTHO05D003857 7.6e-08 60.1 44 70.5
Lj9C466G6 Lonicera japonica HOM05D003878 ORTHO05D003857 7.6e-08 60.1 43 74.4
Medtr3g037390 Medicago truncatula HOM05D003878 ORTHO05D003857 7.6e-08 60.1 43 74.4
Phvul.009G185500 Phaseolus vulgaris HOM05D003878 ORTHO05D003857 7.6e-08 60.1 43 74.4
QL10p017674 Quercus lobata HOM05D003878 ORTHO05D003857 7.6e-08 60.1 43 74.4
TPR.G11840 Trifolium pratense HOM05D003878 ORTHO05D003857 7.6e-08 60.1 43 74.4
TAR623G0526 Trochodendron aralioides HOM05D003878 ORTHO05D003857 7.6e-08 60.1 43 74.4
VMungo1309G1477 Vigna mungo HOM05D003878 ORTHO05D003857 7.6e-08 60.1 43 74.4
GSVIVG01007965001 Vitis vinifera HOM05D003878 ORTHO05D003857 7.6e-08 60.1 43 74.4
Atru.chr9.336 Acer truncatum HOM05D003878 ORTHO05D003857 1.0e-07 59.7 43 72.1
Actinidia19020 Actinidia chinensis HOM05D003878 ORTHO05D003857 1.0e-07 59.7 43 72.1
Actinidia35011 Actinidia chinensis HOM05D003878 ORTHO05D003857 1.0e-07 59.7 43 72.1
Aqoxy3G03485 Aquilegia oxysepala HOM05D003878 ORTHO05D003857 1.0e-07 59.7 44 72.7
CSS0027901 Camellia sinensis var. sinensis HOM05D003878 ORTHO05D003857 1.0e-07 59.7 43 72.1
CSS0032055 Camellia sinensis var. sinensis HOM05D003878 ORTHO05D003857 1.0e-07 59.7 43 72.1
CANSAT80G1069 Cannabis sativa HOM05D003878 ORTHO05D003857 1.0e-07 59.7 43 72.1
Ca_21808_v3 Cicer arietinum L. HOM05D003878 ORTHO05D003857 1.0e-07 59.7 43 72.1
Eucgr.B00537 Eucalyptus grandis HOM05D003878 ORTHO05D003857 1.0e-07 59.7 43 72.1
Glyma.05G025000 Glycine max HOM05D003878 ORTHO05D003857 1.0e-07 59.7 43 72.1
Glyma.06G196200 Glycine max HOM05D003878 ORTHO05D003857 1.0e-07 59.7 43 72.1
Glyma.17G102200 Glycine max HOM05D003878 ORTHO05D003857 1.0e-07 59.7 43 72.1
MD14G1204700 Malus domestica HOM05D003878 ORTHO05D003857 1.0e-07 59.7 43 74.4
Manes.14G081500 Manihot esculenta HOM05D003878 ORTHO05D003857 1.0e-07 59.7 43 72.1
Medtr4g108880 Medicago truncatula HOM05D003878 ORTHO05D003857 1.0e-07 59.7 43 72.1
Nitab4.5_0001211g0280 Nicotiana tabacum HOM05D003878 ORTHO05D003857 1.0e-07 59.7 44 68.2
Nitab4.5_0005900g0090 Nicotiana tabacum HOM05D003878 ORTHO05D003857 1.0e-07 59.7 44 68.2
Phvul.003G188400 Phaseolus vulgaris HOM05D003878 ORTHO05D003857 1.0e-07 59.7 43 72.1
Psat4g049800 Pisum sativum HOM05D003878 ORTHO05D003857 1.0e-07 59.7 43 72.1
PGR062G0001 Punica granatum HOM05D003878 ORTHO05D003857 1.0e-07 59.7 43 72.1
PGR083G0168 Punica granatum HOM05D003878 ORTHO05D003857 1.0e-07 59.7 43 72.1
Sabra15G0086900 Salix brachista HOM05D003878 ORTHO05D003857 1.0e-07 59.7 43 72.1
SGA_v2.0_scaffold25G10935 Striga asiatica HOM05D001764 ORTHO05D001946 1.0e-07 59.7 43 72.1
Thecc.03G093700 Theobroma cacao HOM05D003878 ORTHO05D003857 1.0e-07 59.7 43 72.1
TPR.G681 Trifolium pratense HOM05D003878 ORTHO05D003857 1.0e-07 59.7 43 72.1
vmacro16524 Vaccinium macrocarpon HOM05D003878 ORTHO05D003857 1.0e-07 59.7 43 72.1
VMungo1215G0660 Vigna mungo HOM05D003878 ORTHO05D003857 1.0e-07 59.7 43 72.1
Ah.11g048230 Amaranthus hybridus HOM05D003878 ORTHO05D003857 1.3e-07 59.3 48 62.5
THA.LOC104801462 Tarenaya hassleriana HOM05D003878 ORTHO05D003857 1.3e-07 59.3 43 74.4
Dinv10655 Davidia involucrata HOM05D003878 ORTHO05D003857 1.7e-07 58.9 44 70.5
MBI05_g22506_MAGBIO Magnolia biondii HOM05D003878 ORTHO05D003857 1.7e-07 58.9 43 72.1
MBI05_g41786_MAGBIO Magnolia biondii HOM05D003878 ORTHO05D003857 1.7e-07 58.9 43 72.1
TAR629G1644 Trochodendron aralioides HOM05D003878 ORTHO05D003857 1.7e-07 58.9 43 72.1
Aa31LG11G2040 Aethionema arabicum HOM05D003878 ORTHO05D003857 2.2e-07 58.5 43 72.1
ATR0680G414 Amborella trichopoda HOM05D003878 ORTHO05D003857 2.2e-07 58.5 35 77.1
Duzib205G1832 Durio zibethinus HOM05D003878 ORTHO05D003857 2.2e-07 58.5 44 68.2
Lalb_Chr08g0235491 Lupinus albus HOM05D003878 ORTHO05D003857 2.2e-07 58.5 43 72.1
MD06G1197300 Malus domestica HOM05D003878 ORTHO05D003857 2.2e-07 58.5 43 72.1
Gohir.D11G294700 Gossypium hirsutum HOM05D003878 ORTHO05D003857 2.9e-07 58.2 35 77.1
Gorai.007G317900 Gossypium raimondii HOM05D003878 ORTHO05D003857 2.9e-07 58.2 35 77.1
Hma1.2p1_0322F.1_g125070 Hydrangea macrophylla HOM05D003878 ORTHO05D003857 2.9e-07 58.2 43 72.1
Potri.015G061900 Populus trichocarpa HOM05D003878 ORTHO05D003857 2.9e-07 58.2 35 77.1
Prupe.5G198000 Prunus persica HOM05D003878 ORTHO05D003857 2.9e-07 58.2 43 72.1
SEGI_11051 Sequoiadendron giganteum HOM05D003878 ORTHO05D003857 2.9e-07 58.2 43 72.1
Sc12g0006500 Simmondsia chinensis HOM05D003878 ORTHO05D003857 2.9e-07 58.2 43 69.8
Cfa018911 Carpinus fangiana HOM05D003878 ORTHO05D003857 3.8e-07 57.8 43 72.1
Haze_07295 Corylus avellana HOM05D001764 ORTHO05D003857 3.8e-07 57.8 43 72.1
ECA247G3052 Erigeron canadensis HOM05D003878 ORTHO05D003857 3.8e-07 57.8 43 69.8
HanXRQChr02g0043181 Helianthus annuus HOM05D003878 ORTHO05D003857 3.8e-07 57.8 43 69.8
Lsat_1_v5_gn_1_14320 Lactuca sativa HOM05D003878 ORTHO05D003857 3.8e-07 57.8 43 69.8
Nn2g10380 Nelumbo nucifera HOM05D003878 ORTHO05D003857 3.8e-07 57.8 35 74.3
PSO063G5546 Papaver somniferum HOM05D003878 ORTHO05D003857 3.8e-07 57.8 44 70.5
PSO198G0128 Papaver somniferum HOM05D003878 ORTHO05D003857 3.8e-07 57.8 44 70.5
unitig_0.g775 Utricularia gibba HOM05D003878 ORTHO05D003857 3.8e-07 57.8 43 69.8
Zm00001eb096220 Zea mays HOM05D003878 ORTHO05D003857 3.8e-07 57.8 48 62.5
Zm00001eb150240 Zea mays HOM05D020494 ORTHO05D003857 3.8e-07 57.8 48 62.5
Zm00001eb184870 Zea mays HOM05D020494 ORTHO05D003857 3.8e-07 57.8 48 62.5
Zm00001eb247330 Zea mays HOM05D003878 ORTHO05D003857 3.8e-07 57.8 48 62.5
AL8G38050 Arabidopsis lyrata HOM05D003878 ORTHO05D003857 4.9e-07 57.4 43 72.1
AT5G61380 Arabidopsis thaliana HOM05D003878 ORTHO05D003857 4.9e-07 57.4 43 72.1
BcaB04g19909 Brassica carinata HOM05D003878 ORTHO05D003857 4.9e-07 57.4 43 72.1
BcaC04g23454 Brassica carinata HOM05D003878 ORTHO05D003857 4.9e-07 57.4 43 72.1
BcaC06g33245 Brassica carinata HOM05D003878 ORTHO05D003857 4.9e-07 57.4 43 72.1
A03p46980 Brassica napus HOM05D003878 ORTHO05D003857 4.9e-07 57.4 43 72.1
C07p45020 Brassica napus HOM05D003878 ORTHO05D003857 4.9e-07 57.4 43 72.1
C09p08170 Brassica napus HOM05D003878 ORTHO05D003857 4.9e-07 57.4 43 72.1
BolC7t45025H Brassica oleracea HOM05D003878 ORTHO05D003857 4.9e-07 57.4 43 72.1
BolC9t53729H Brassica oleracea HOM05D003878 ORTHO05D003857 4.9e-07 57.4 43 72.1
BraA03t13822Z Brassica rapa HOM05D003878 ORTHO05D003857 4.9e-07 57.4 43 72.1
BraA09t36379Z Brassica rapa HOM05D003878 ORTHO05D003857 4.9e-07 57.4 43 72.1
Carub.0008s2205 Capsella rubella HOM05D003878 ORTHO05D003857 4.9e-07 57.4 43 72.1
CARHR275140 Cardamine hirsuta HOM05D003878 ORTHO05D003857 4.9e-07 57.4 43 72.1
CDE07G1945 Ceratophyllum demersum HOM05D003878 ORTHO05D003857 4.9e-07 57.4 43 65.1
Thhalv10003924m.g Eutrema salsugineum HOM05D003878 ORTHO05D003857 4.9e-07 57.4 43 72.1
Sp2g24590 Schrenkiella parvula HOM05D003878 ORTHO05D003857 4.9e-07 57.4 43 72.1
Sed0008795 Sechium edule HOM05D003878 ORTHO05D003857 4.9e-07 57.4 43 72.1
CiPaw.11G047100 Carya illinoinensis HOM05D003878 ORTHO05D003857 6.5e-07 57.0 35 74.3
FvH4_5g14560 Fragaria vesca HOM05D003878 ORTHO05D003857 6.5e-07 57.0 35 77.1
FAN08G1337 Fragaria x ananassa HOM05D003878 ORTHO05D003857 6.5e-07 57.0 35 77.1
FAN13G2746 Fragaria x ananassa HOM05D003878 ORTHO05D003857 6.5e-07 57.0 35 77.1
PSO017G0340 Papaver somniferum HOM05D003878 ORTHO05D003857 6.5e-07 57.0 43 69.8
PSO478G1572 Papaver somniferum HOM05D003878 ORTHO05D003857 6.5e-07 57.0 43 69.8
RcHm_v2.0_Chr7g0182001 Rosa chinensis HOM05D003878 ORTHO05D003857 6.5e-07 57.0 35 77.1
TWI15G0625 Tripterygium wilfordii HOM05D003878 ORTHO05D003857 6.5e-07 57.0 35 74.3
TWI60G1095 Tripterygium wilfordii HOM05D003878 ORTHO05D003857 6.5e-07 57.0 35 74.3
arahy.Tifrunner.gnm1.ann1.V960AN Arachis hypogaea HOM05D001073 ORTHO05D002392 8.4e-07 56.6 60 45.0
Manes.06G089800 Manihot esculenta HOM05D003878 ORTHO05D003857 8.4e-07 56.6 35 77.1
Nn5g26927 Nelumbo nucifera HOM05D003878 ORTHO05D003857 8.4e-07 56.6 35 74.3
SMO358G0608 Selaginella moellendorffii HOM05D003878 ORTHO05D003857 8.4e-07 56.6 43 69.8
ClCG04G012090 Citrullus lanatus HOM05D003878 ORTHO05D003857 1.1e-06 56.2 43 67.4
MELO3C001999.2 Cucumis melo HOM05D003878 ORTHO05D003857 1.1e-06 56.2 43 67.4
CsaV3_1G005680 Cucumis sativus L. HOM05D003878 ORTHO05D003857 1.1e-06 56.2 43 67.4
Lj4g0002884 Lotus japonicus HOM05D003878 ORTHO05D003857 1.1e-06 56.2 43 67.4
Lalb_Chr11g0067411 Lupinus albus HOM05D001073 ORTHO05D002392 1.1e-06 56.2 60 48.3
Sed0015977 Sechium edule HOM05D003878 ORTHO05D003857 1.1e-06 56.2 43 67.4
Hund09823 Selenicereus undatus HOM05D003878 ORTHO05D003857 1.1e-06 56.2 44 65.9
Actinidia37611 Actinidia chinensis HOM05D003878 ORTHO05D003857 1.4e-06 55.8 42 69.0
EL10Ac5g11059 Beta vulgaris HOM05D003878 ORTHO05D003857 1.4e-06 55.8 43 67.4
Os02g0618200 Oryza sativa ssp. japonica HOM05D003878 ORTHO05D003857 1.4e-06 55.8 43 69.8
Ah.02g113730 Amaranthus hybridus HOM05D003878 ORTHO05D003857 1.9e-06 55.5 43 67.4
arahy.Tifrunner.gnm1.ann1.A9G6ZW Arachis hypogaea HOM05D001073 ORTHO05D002392 1.9e-06 55.5 60 43.3
FAN18G1413 Fragaria x ananassa HOM05D003878 ORTHO05D003857 1.9e-06 55.5 35 74.3
HanXRQChr08g0236661 Helianthus annuus HOM05D003878 ORTHO05D003857 1.9e-06 55.5 43 69.8
SalBow7G4352 Salvia bowleyana HOM05D003878 ORTHO05D003857 1.9e-06 55.5 40 72.5
Glyma.06G136600 Glycine max HOM05D001073 ORTHO05D002392 2.5e-06 55.1 60 43.3
Lsat_1_v5_gn_5_21481 Lactuca sativa HOM05D003878 ORTHO05D003857 2.5e-06 55.1 43 67.4
Mapoly0085s0081 Marchantia polymorpha HOM05D003878 ORTHO05D003857 2.5e-06 55.1 43 65.1
HPP92_007236 Vanilla planifolia HOM05D001073 ORTHO05D002392 2.5e-06 55.1 73 39.7
VMungo1309G2840 Vigna mungo HOM05D001073 ORTHO05D002392 2.5e-06 55.1 60 43.3
Glyma.04G228300 Glycine max HOM05D001073 ORTHO05D002392 3.2e-06 54.7 60 43.3
Lj1g0026375 Lotus japonicus HOM05D001073 ORTHO05D002392 3.2e-06 54.7 60 46.7
unitig_60.g25802 Utricularia gibba HOM05D003878 ORTHO05D003857 3.2e-06 54.7 41 70.7
CDE09G1270 Ceratophyllum demersum HOM05D003878 ORTHO05D003857 4.2e-06 54.3 35 71.4
Lj5A108G51 Lonicera japonica HOM05D003878 ORTHO05D003857 4.2e-06 54.3 40 72.5
FAN03G1957 Fragaria x ananassa HOM05D001073 ORTHO05D002392 5.5e-06 53.9 63 42.9
Lalb_Chr08g0239601 Lupinus albus HOM05D001073 ORTHO05D002392 5.5e-06 53.9 69 44.9
CiPaw.06G041200 Carya illinoinensis HOM05D001073 ORTHO05D002392 9.3e-06 53.1 61 41.0


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