Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g078640 Medicago truncatula HOM05D006561 ORTHO05D008097 1.1e-136 490.0 245 100.0
Psat0s1402g0080 Pisum sativum HOM05D006561 ORTHO05D008097 1.1e-115 420.2 246 85.4
Ca_03532_v3 Cicer arietinum L. HOM05D006561 ORTHO05D008097 2.4e-112 409.1 246 82.1
TPR.G7947 Trifolium pratense HOM05D006561 ORTHO05D008097 3.5e-111 405.2 246 80.9
VMungo1080G0633 Vigna mungo HOM05D006561 ORTHO05D008097 1.0e-94 350.5 246 68.7
Phvul.005G029100 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 3.0e-94 349.0 247 69.6
Lalb_Chr25g0286221 Lupinus albus HOM05D006561 ORTHO05D008097 2.8e-92 342.4 248 67.3
Glyma.13G273500 Glycine max HOM05D006561 ORTHO05D008097 9.4e-88 327.4 250 64.8
Phvul.005G075200 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 7.7e-82 307.8 208 70.7
Lj3g0026269 Lotus japonicus HOM05D006561 ORTHO05D008097 2.1e-79 299.7 202 70.3
TAR627G0129 Trochodendron aralioides HOM05D006561 ORTHO05D008097 1.4e-70 270.4 251 55.0
arahy.Tifrunner.gnm1.ann1.RM2LTG Arachis hypogaea HOM05D006561 ORTHO05D008097 5.2e-70 268.5 246 56.1
TWI38G0530 Tripterygium wilfordii HOM05D006561 ORTHO05D008097 1.5e-69 266.9 247 51.8
Manes.03G104900 Manihot esculenta HOM05D006561 ORTHO05D008097 1.7e-68 263.5 247 51.0
Oeu005397.1 Olea europaea HOM05D006561 ORTHO05D008097 1.7e-68 263.5 238 52.9
ClCG11G017750 Citrullus lanatus HOM05D006561 ORTHO05D008097 2.2e-68 263.1 245 50.2
Dinv14944 Davidia involucrata HOM05D006561 ORTHO05D008097 2.2e-68 263.1 247 51.4
Eucgr.F01175 Eucalyptus grandis HOM05D006561 ORTHO05D008097 3.7e-68 262.3 244 51.6
Rhsim06G0203200 Rhododendron simsii HOM05D006561 ORTHO05D008097 7.0e-67 258.1 251 50.6
Sed0026268 Sechium edule HOM05D006561 ORTHO05D008097 7.0e-67 258.1 245 50.2
CsaV3_4G033370 Cucumis sativus L. HOM05D006561 ORTHO05D008097 9.1e-67 257.7 249 49.4
Nn1g06395 Nelumbo nucifera HOM05D006561 ORTHO05D008097 9.1e-67 257.7 250 52.0
CSS0025681 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 2.0e-66 256.5 252 52.8
CSS0029173 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 2.0e-66 256.5 252 52.8
PGSC0003DMG401012439 Solanum tuberosum HOM05D006561 ORTHO05D008097 2.7e-66 256.1 251 50.2
Hma1.2p1_0416F.1_g148410 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 3.5e-66 255.8 245 50.2
PGR083G2053 Punica granatum HOM05D006561 ORTHO05D008097 3.5e-66 255.8 249 50.6
CiPaw.11G166900 Carya illinoinensis HOM05D006561 ORTHO05D008097 5.9e-66 255.0 247 49.8
Cfa020616 Carpinus fangiana HOM05D006561 ORTHO05D008097 7.7e-66 254.6 247 49.0
Aqoxy1G02303 Aquilegia oxysepala HOM05D006561 ORTHO05D008097 1.7e-65 253.4 249 50.6
Nitab4.5_0000246g0010 Nicotiana tabacum HOM05D006561 ORTHO05D008097 6.5e-65 251.5 251 49.0
EL10Ac4g08253 Beta vulgaris HOM05D006561 ORTHO05D008097 1.5e-64 250.4 248 50.0
PSO675G8981 Papaver somniferum HOM05D006561 ORTHO05D008097 1.5e-64 250.4 251 50.2
Prupe.4G174000 Prunus persica HOM05D006561 ORTHO05D008097 1.5e-64 250.4 215 55.8
Haze_09389 Corylus avellana HOM05D006561 ORTHO05D008097 1.9e-64 250.0 247 48.2
Migut.M00775 Erythranthe guttata HOM05D006561 ORTHO05D008097 2.5e-64 249.6 248 50.0
Sopen07g031000 Solanum pennellii HOM05D006561 ORTHO05D008097 2.5e-64 249.6 252 49.2
MELO3C025617.2 Cucumis melo HOM05D006561 ORTHO05D008097 5.5e-64 248.4 257 47.9
Nitab4.5_0002019g0020 Nicotiana tabacum HOM05D006561 ORTHO05D008097 7.2e-64 248.1 251 48.6
Ciclev10009269m.g Citrus clementina HOM05D006561 ORTHO05D008097 9.4e-64 247.7 247 50.6
Solyc07g062780.3 Solanum lycopersicum HOM05D006561 ORTHO05D008097 9.4e-64 247.7 252 48.8
Sc16g0007290 Simmondsia chinensis HOM05D006561 ORTHO05D008097 1.2e-63 247.3 241 48.5
BcaB06g29539 Brassica carinata HOM05D006561 ORTHO05D008097 2.1e-63 246.5 247 50.2
MD03G1235300 Malus domestica HOM05D006561 ORTHO05D008097 2.1e-63 246.5 247 50.2
A05p34300 Brassica napus HOM05D006561 ORTHO05D008097 6.1e-63 245.0 247 49.8
RcHm_v2.0_Chr5g0032331 Rosa chinensis HOM05D006561 ORTHO05D008097 6.1e-63 245.0 250 49.2
MSTRG.15242 Avicennia marina HOM05D006561 ORTHO05D008097 1.4e-62 243.8 251 48.6
C05p52080 Brassica napus HOM05D006561 ORTHO05D008097 1.8e-62 243.4 247 49.8
AUR62019482 Chenopodium quinoa HOM05D006561 ORTHO05D008097 1.8e-62 243.4 247 47.8
Sp3g13360 Schrenkiella parvula HOM05D006561 ORTHO05D008097 1.8e-62 243.4 247 49.0
BolC5t33893H Brassica oleracea HOM05D006561 ORTHO05D008097 3.0e-62 242.7 247 49.8
GSVIVG01014276001 Vitis vinifera HOM05D006561 ORTHO05D008097 3.0e-62 242.7 216 52.8
CARHR090130 Cardamine hirsuta HOM05D006561 ORTHO05D008097 6.8e-62 241.5 247 49.4
Thhalv10021394m.g Eutrema salsugineum HOM05D006561 ORTHO05D008097 8.8e-62 241.1 249 49.0
Aa31LG8G2350 Aethionema arabicum HOM05D006724 ORTHO05D008514 2.6e-61 239.6 233 50.2
AUR62036152 Chenopodium quinoa HOM05D006561 ORTHO05D008097 2.6e-61 239.6 252 47.6
Cc05_g11670 Coffea canephora HOM05D006561 ORTHO05D008097 2.6e-61 239.6 239 48.5
Gohir.D01G047500 Gossypium hirsutum HOM05D006561 ORTHO05D008097 2.6e-61 239.6 250 48.0
Gorai.002G067000 Gossypium raimondii HOM05D006561 ORTHO05D008097 2.6e-61 239.6 250 48.0
Potri.011G141200 Populus trichocarpa HOM05D006561 ORTHO05D008097 3.4e-61 239.2 255 49.4
AT3G15150 Arabidopsis thaliana HOM05D006561 ORTHO05D008097 4.4e-61 238.8 249 49.0
Thecc.07G098700 Theobroma cacao HOM05D006561 ORTHO05D008097 4.4e-61 238.8 264 44.3
Carub.0003s1480 Capsella rubella HOM05D006561 ORTHO05D008097 5.7e-61 238.4 241 49.8
ATR0602G252 Amborella trichopoda HOM05D006561 ORTHO05D008097 7.5e-61 238.0 241 46.5
BraA05t22251Z Brassica rapa HOM05D006561 ORTHO05D008097 7.5e-61 238.0 254 48.4
FAN11G0360 Fragaria x ananassa HOM05D006561 ORTHO05D008097 7.5e-61 238.0 244 47.5
FvH4_3g19260 Fragaria vesca HOM05D006561 ORTHO05D008097 9.8e-61 237.7 255 47.1
FAN25G3572 Fragaria x ananassa HOM05D006561 ORTHO05D008097 9.8e-61 237.7 255 47.8
Gohir.A01G061000 Gossypium hirsutum HOM05D006561 ORTHO05D008097 3.7e-60 235.7 250 47.2
AL3G27540 Arabidopsis lyrata HOM05D006561 ORTHO05D008097 4.8e-60 235.3 249 49.4
Sabra11G0126800 Salix brachista HOM05D006561 ORTHO05D008097 4.8e-60 235.3 255 48.6
Hund17607 Selenicereus undatus HOM05D006561 ORTHO05D008097 6.3e-60 235.0 247 47.4
Peaxi162Scf00069g01837 Petunia axillaris HOM05D006561 ORTHO05D008097 1.8e-59 233.4 248 47.6
CAN.G162.30 Capsicum annuum HOM05D006561 ORTHO05D008097 5.4e-59 231.9 211 49.8
unitig_747.g21579 Utricularia gibba HOM05D006561 ORTHO05D008097 5.4e-59 231.9 237 49.4
Lj8A153G39 Lonicera japonica HOM05D006561 ORTHO05D008097 7.0e-59 231.5 205 55.6
Atru.chr2.2390 Acer truncatum HOM05D006561 ORTHO05D008097 9.1e-59 231.1 247 47.0
THA.LOC104818093 Tarenaya hassleriana HOM05D006561 ORTHO05D008097 2.0e-58 229.9 250 47.2
DCAR_017121 Daucus carota HOM05D006561 ORTHO05D008097 1.0e-57 227.6 249 47.8
CANSAT35G0349 Cannabis sativa HOM05D006561 ORTHO05D008097 5.0e-57 225.3 251 47.0
ECA234G0004 Erigeron canadensis HOM05D006561 ORTHO05D008097 1.1e-56 224.2 243 46.9
MBI02_g25404_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 9.5e-56 221.1 247 44.9
Cpa.g.sc80.2 Carica papaya HOM05D006561 ORTHO05D008097 1.2e-55 220.7 246 44.3
Duzib213G1006 Durio zibethinus HOM05D006561 ORTHO05D008097 1.2e-55 220.7 245 44.1
HanXRQChr10g0302511 Helianthus annuus HOM05D006561 ORTHO05D008097 2.1e-55 219.9 241 46.5
Lsat_1_v5_gn_5_127501 Lactuca sativa HOM05D006561 ORTHO05D008097 2.8e-55 219.5 247 45.3
arahy.Tifrunner.gnm1.ann1.YD6KBQ Arachis hypogaea HOM05D006561 ORTHO05D008097 1.4e-54 217.2 245 48.6
SHI39306 Sapria himalayana HOM05D006561 ORTHO05D008097 1.8e-54 216.9 245 43.3
SHI39545 Sapria himalayana HOM05D006561 ORTHO05D008097 1.8e-54 216.9 245 43.3
vmacro11896 Vaccinium macrocarpon HOM05D006561 ORTHO05D008097 8.3e-52 208.0 321 36.8
Zm00001eb295840 Zea mays HOM05D006561 ORTHO05D008097 1.1e-51 207.6 237 41.8
MD11G1255800 Malus domestica HOM05D006561 ORTHO05D008097 1.2e-50 204.1 187 52.9
MBI02_g44100_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 7.8e-50 201.4 220 44.1
SGA_v2.0_scaffold34G13795 Striga asiatica HOM05D006561 ORTHO05D008097 8.6e-49 198.0 193 46.6
HPP92_024567 Vanilla planifolia HOM05D006561 ORTHO05D008097 3.3e-48 196.1 292 37.0
Ah.06g184730 Amaranthus hybridus HOM05D006561 ORTHO05D008097 7.8e-42 174.9 239 41.0
PSO541G4753 Papaver somniferum HOM05D006561 ORTHO05D008097 3.3e-40 169.5 182 48.4
Pp3c22_18560 Physcomitrium patens HOM05D006561 ORTHO05D008097 2.3e-38 163.3 245 32.7
Actinidia12544 Actinidia chinensis HOM05D006561 ORTHO05D008097 7.5e-37 158.3 176 47.2
Actinidia07498 Actinidia chinensis HOM05D006561 ORTHO05D008097 7.0e-35 151.8 117 61.5
QL08p023698 Quercus lobata HOM05D006561 ORTHO05D008097 9.2e-35 151.4 121 58.7
AagrBONN_evm.TU.Sc2ySwM_228.4556 Anthoceros agrestis HOM05D006561 ORTHO05D008097 2.7e-34 149.8 278 33.1
FAN16G3278 Fragaria x ananassa HOM05D006561 ORTHO05D008097 1.7e-33 147.1 129 53.5
SMO143G0268 Selaginella moellendorffii HOM05D006561 ORTHO05D008097 8.6e-33 144.8 219 37.0
Mapoly0096s0048 Marchantia polymorpha HOM05D006561 ORTHO05D008097 4.3e-32 142.5 237 31.2
SMO265G0056 Selaginella moellendorffii HOM05D006561 ORTHO05D008097 2.3e-30 136.7 191 38.2
CBR_g861 Chara braunii HOM05D006561 ORTHO05D008097 4.9e-28 129.0 203 31.0
QL08p023707 Quercus lobata HOM05D006561 ORTHO05D008097 6.6e-25 118.6 126 46.0
arahy.Tifrunner.gnm1.ann1.YKS4T6 Arachis hypogaea HOM05D006561 ORTHO05D008097 4.3e-24 115.9 144 47.2
CDE08G0579 Ceratophyllum demersum HOM05D006561 ORTHO05D008097 1.2e-23 114.4 138 38.4
Hma1.2p1_0416F.1_g148400 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 2.4e-22 110.2 127 44.1
Haze_09400 Corylus avellana HOM05D006561 ORTHO05D008097 6.8e-22 108.6 126 42.9
Mapoly0066s0041 Marchantia polymorpha HOM05D006561 ORTHO05D008097 2.8e-15 86.7 90 42.2
PRCOL_00000682 Prasinoderma coloniale HOM05D006561 ORTHO05D008097 1.1e-14 84.7 159 32.1
Nn5g27383 Nelumbo nucifera HOM05D006561 ORTHO05D008097 2.4e-14 83.6 97 42.3
Pp3c23_10880 Physcomitrium patens HOM05D006561 ORTHO05D008097 1.9e-11 73.9 99 35.4
Pp3c20_12000 Physcomitrium patens HOM05D006561 ORTHO05D008097 1.3e-09 67.8 94 38.3


User provided reference genes

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