Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0207s0009 Marchantia polymorpha HOM05D001594 ORTHO05D002862 1.2e-130 469.9 254 100.0
Pp3c1_26350 Physcomitrium patens HOM05D001594 ORTHO05D002862 2.7e-13 80.1 87 51.7
VMungo1383G3732 Vigna mungo HOM05D001594 ORTHO05D002862 4.6e-13 79.3 102 48.0
AagrBONN_evm.TU.Sc2ySwM_344.1969 Anthoceros agrestis HOM05D001594 ORTHO05D002862 1.3e-12 77.8 118 44.1
COL.COLO4_14516 Corchorus olitorius HOM05D001594 ORTHO05D002862 1.3e-12 77.8 93 50.5
LjContig00357g0010800 Lotus japonicus HOM05D001594 ORTHO05D002862 1.3e-12 77.8 94 52.1
arahy.Tifrunner.gnm1.ann1.XZA3Z3 Arachis hypogaea HOM05D001594 ORTHO05D002862 1.8e-12 77.4 106 45.3
Ca_05970_v3 Cicer arietinum L. HOM05D001594 ORTHO05D002862 1.8e-12 77.4 97 49.5
Lalb_Chr04g0250541 Lupinus albus HOM05D001594 ORTHO05D002862 1.8e-12 77.4 93 50.5
Phvul.008G098000 Phaseolus vulgaris HOM05D001594 ORTHO05D002862 1.8e-12 77.4 102 47.1
Psat2g031840 Pisum sativum HOM05D001594 ORTHO05D002862 1.8e-12 77.4 103 47.6
RcHm_v2.0_Chr1g0370431 Rosa chinensis HOM05D001594 ORTHO05D002862 2.3e-12 77.0 106 45.3
Os07g0693700 Oryza sativa ssp. japonica HOM05D001594 ORTHO05D002862 3.9e-12 76.3 96 49.0
Duzib106G0141 Durio zibethinus HOM05D001594 ORTHO05D002862 5.1e-12 75.9 93 49.5
Glyma.18G202700 Glycine max HOM05D001594 ORTHO05D002862 5.1e-12 75.9 102 45.1
Glyma.07G151400 Glycine max HOM05D001594 ORTHO05D002862 8.7e-12 75.1 102 45.1
Lj1g0012009 Lotus japonicus HOM05D001594 ORTHO05D002862 8.7e-12 75.1 100 46.0
Thecc.05G014100 Theobroma cacao HOM05D001594 ORTHO05D002862 8.7e-12 75.1 93 49.5
Oeu038766.1 Olea europaea HOM05D001594 ORTHO05D002862 1.1e-11 74.7 95 49.5
SMO115G0087 Selaginella moellendorffii HOM05D001594 ORTHO05D002862 1.1e-11 74.7 91 50.5
GSVIVG01032802001 Vitis vinifera HOM05D001594 ORTHO05D002862 1.1e-11 74.7 95 47.4
Manes.08G093100 Manihot esculenta HOM05D001594 ORTHO05D002862 1.5e-11 74.3 93 49.5
Medtr5g082840 Medicago truncatula HOM05D001594 ORTHO05D002862 1.9e-11 73.9 97 47.4
TPR.G38423 Trifolium pratense HOM05D001594 ORTHO05D002862 1.9e-11 73.9 104 45.2
Haze_21018 Corylus avellana HOM05D001594 ORTHO05D002862 2.5e-11 73.6 94 47.9
THA.LOC104823185 Tarenaya hassleriana HOM05D001594 ORTHO05D002862 2.5e-11 73.6 99 47.5
Gohir.D04G131200 Gossypium hirsutum HOM05D001594 ORTHO05D002862 3.3e-11 73.2 87 51.7
Gorai.012G115100 Gossypium raimondii HOM05D001594 ORTHO05D002862 3.3e-11 73.2 87 51.7
THA.LOC104826848 Tarenaya hassleriana HOM05D001594 ORTHO05D002862 3.3e-11 73.2 99 47.5
TPR.G20368 Trifolium pratense HOM05D001594 ORTHO05D002862 3.3e-11 73.2 108 44.4
Ciclev10030572m.g Citrus clementina HOM05D001594 ORTHO05D002862 4.3e-11 72.8 95 47.4
Medtr7g068810 Medicago truncatula HOM05D001594 ORTHO05D002862 4.3e-11 72.8 108 43.5
Psat3g127240 Pisum sativum HOM05D001594 ORTHO05D002862 4.3e-11 72.8 102 46.1
Sed0018377 Sechium edule HOM05D001594 ORTHO05D002862 4.3e-11 72.8 96 43.8
Ciclev10010948m.g Citrus clementina HOM05D001594 ORTHO05D002862 5.6e-11 72.4 99 45.5
Dinv21741 Davidia involucrata HOM05D001594 ORTHO05D002862 5.6e-11 72.4 95 45.3
Duzib093G0392 Durio zibethinus HOM05D001594 ORTHO05D002862 5.6e-11 72.4 87 50.6
Glyma.02G257800 Glycine max HOM05D001594 ORTHO05D002862 5.6e-11 72.4 96 50.0
Mapoly0063s0003 Marchantia polymorpha HOM05D001594 ORTHO05D002862 5.6e-11 72.4 94 43.6
Os03g0290400 Oryza sativa ssp. japonica HOM05D001594 ORTHO05D002862 5.6e-11 72.4 76 46.1
AT5G05570 Arabidopsis thaliana HOM05D001594 ORTHO05D002862 7.4e-11 72.0 95 47.4
CSS0047942 Camellia sinensis var. sinensis HOM05D001594 ORTHO05D002862 7.4e-11 72.0 75 53.3
Gohir.A04G092000 Gossypium hirsutum HOM05D001594 ORTHO05D002862 7.4e-11 72.0 111 43.2
Lj8C66G2 Lonicera japonica HOM05D001594 ORTHO05D002862 7.4e-11 72.0 114 42.1
PSO339G3156 Papaver somniferum HOM05D001594 ORTHO05D002862 7.4e-11 72.0 98 48.0
Actinidia11574 Actinidia chinensis HOM05D001594 ORTHO05D002862 9.6e-11 71.6 95 46.3
AL6G15460 Arabidopsis lyrata HOM05D001594 ORTHO05D002862 9.6e-11 71.6 95 47.4
Aqoxy2G00867 Aquilegia oxysepala HOM05D001594 ORTHO05D002862 1.6e-10 70.9 97 44.3
Hma1.2p1_0523F.1_g172240 Hydrangea macrophylla HOM05D001594 ORTHO05D002862 1.6e-10 70.9 95 44.2
BraA10t45114Z Brassica rapa HOM05D001594 ORTHO05D002862 2.1e-10 70.5 95 47.4
Carub.0006s0447 Capsella rubella HOM05D001594 ORTHO05D002862 2.1e-10 70.5 95 47.4
COL.COLO4_25745 Corchorus olitorius HOM05D001594 ORTHO05D002862 2.1e-10 70.5 94 45.7
PSO801G0181 Papaver somniferum HOM05D001594 ORTHO05D002862 2.1e-10 70.5 98 49.0
Atru.chr8.2259 Acer truncatum HOM05D001594 ORTHO05D002862 2.8e-10 70.1 91 46.2
BcaB05g21696 Brassica carinata HOM05D001594 ORTHO05D002862 2.8e-10 70.1 95 47.4
BcaC06g32266 Brassica carinata HOM05D001594 ORTHO05D002862 2.8e-10 70.1 117 42.7
A10p30730 Brassica napus HOM05D001594 ORTHO05D002862 2.8e-10 70.1 117 42.7
C09p71220 Brassica napus HOM05D001594 ORTHO05D002862 2.8e-10 70.1 117 42.7
BraA02t04854Z Brassica rapa HOM05D001594 ORTHO05D002862 2.8e-10 70.1 95 47.4
CSS0007956 Camellia sinensis var. sinensis HOM05D001594 ORTHO05D002862 2.8e-10 70.1 75 52.0
Thhalv10012508m.g Eutrema salsugineum HOM05D001594 ORTHO05D002862 2.8e-10 70.1 95 47.4
DCAR_010464 Daucus carota HOM05D001594 ORTHO05D002862 3.6e-10 69.7 97 43.3
Potri.008G069700 Populus trichocarpa HOM05D001594 ORTHO05D002862 3.6e-10 69.7 103 45.6
Sp6g37290 Schrenkiella parvula HOM05D001594 ORTHO05D002862 3.6e-10 69.7 116 40.5
TAR623G1719 Trochodendron aralioides HOM05D001594 ORTHO05D002862 3.6e-10 69.7 95 44.2
C02p02420 Brassica napus HOM05D001594 ORTHO05D002862 4.8e-10 69.3 95 47.4
BolC2t06205H Brassica oleracea HOM05D001594 ORTHO05D002862 4.8e-10 69.3 99 45.5
CsaV3_3G033670 Cucumis sativus L. HOM05D001594 ORTHO05D002862 4.8e-10 69.3 88 47.7
GSVIVG01011173001 Vitis vinifera HOM05D001594 ORTHO05D002862 4.8e-10 69.3 95 46.3
Phvul.008G223200 Phaseolus vulgaris HOM05D001594 ORTHO05D002862 6.2e-10 68.9 77 53.2
Rhsim05G0216900 Rhododendron simsii HOM05D001594 ORTHO05D002862 6.2e-10 68.9 98 45.9
vmacro20290 Vaccinium macrocarpon HOM05D001594 ORTHO05D002862 6.2e-10 68.9 87 50.6
CARHR207690 Cardamine hirsuta HOM05D001594 ORTHO05D002862 8.1e-10 68.6 95 46.3
CiPaw.02G193300 Carya illinoinensis HOM05D001594 ORTHO05D002862 8.1e-10 68.6 91 46.2
Duzib128G1282 Durio zibethinus HOM05D001594 ORTHO05D002862 8.1e-10 68.6 93 44.1
HanXRQChr10g0294031 Helianthus annuus HOM05D001594 ORTHO05D002862 8.1e-10 68.6 112 42.0
Manes.10G011200 Manihot esculenta HOM05D001594 ORTHO05D002862 8.1e-10 68.6 93 47.3
VMungo0647G1485 Vigna mungo HOM05D001594 ORTHO05D002862 8.1e-10 68.6 77 51.9
MSTRG.8337 Avicennia marina HOM05D001594 ORTHO05D002862 1.1e-09 68.2 93 49.5
CANSAT35G1569 Cannabis sativa HOM05D001594 ORTHO05D002862 1.4e-09 67.8 94 44.7
Migut.J00151 Erythranthe guttata HOM05D001594 ORTHO05D002862 1.4e-09 67.8 92 46.7
RcHm_v2.0_Chr3g0462831 Rosa chinensis HOM05D001594 ORTHO05D002862 1.4e-09 67.8 104 38.5
Sed0001337 Sechium edule HOM05D001594 ORTHO05D002862 1.4e-09 67.8 114 41.2
Lalb_Chr03g0043221 Lupinus albus HOM05D001594 ORTHO05D002862 1.8e-09 67.4 100 45.0
Potri.016G117800 Populus trichocarpa HOM05D001594 ORTHO05D002862 1.8e-09 67.4 93 44.1
CANSAT56G2210 Cannabis sativa HOM05D001594 ORTHO05D002862 2.4e-09 67.0 117 39.3
AUR62030493 Chenopodium quinoa HOM05D001594 ORTHO05D002862 2.4e-09 67.0 96 49.0
Ca_26556_v3 Cicer arietinum L. HOM05D001594 ORTHO05D002862 2.4e-09 67.0 103 44.7
MELO3C026791.2 Cucumis melo HOM05D001594 ORTHO05D002862 2.4e-09 67.0 101 41.6
FAN02G3794 Fragaria x ananassa HOM05D001594 ORTHO05D002862 2.4e-09 67.0 108 38.0
PGR031G3904 Punica granatum HOM05D001594 ORTHO05D002862 2.4e-09 67.0 108 39.8
ClCG07G004300 Citrullus lanatus HOM05D001594 ORTHO05D002862 3.1e-09 66.6 101 41.6
Gohir.A05G329933 Gossypium hirsutum HOM05D001594 ORTHO05D002862 3.1e-09 66.6 99 41.4
Gohir.D04G068000 Gossypium hirsutum HOM05D001594 ORTHO05D002862 3.1e-09 66.6 93 45.2
Gorai.012G077100 Gossypium raimondii HOM05D001594 ORTHO05D002862 3.1e-09 66.6 93 45.2
Hma1.2p1_0479F.1_g161395 Hydrangea macrophylla HOM05D001594 ORTHO05D002862 3.1e-09 66.6 100 42.0
FvH4_6g11290 Fragaria vesca HOM05D001594 ORTHO05D002862 4.0e-09 66.2 107 37.4
FAN05G3721 Fragaria x ananassa HOM05D001594 ORTHO05D002862 4.0e-09 66.2 107 37.4
FAN14G0933 Fragaria x ananassa HOM05D001594 ORTHO05D002862 4.0e-09 66.2 107 37.4
FAN14G4686 Fragaria x ananassa HOM05D001594 ORTHO05D002862 4.0e-09 66.2 107 37.4
SalBow5G4926 Salvia bowleyana HOM05D001594 ORTHO05D002862 4.0e-09 66.2 98 42.9
arahy.Tifrunner.gnm1.ann1.KP3J42 Arachis hypogaea HOM05D001594 ORTHO05D002862 5.3e-09 65.9 82 46.3
CsaV3_5G010240 Cucumis sativus L. HOM05D001594 ORTHO05D002862 5.3e-09 65.9 132 37.9
Nitab4.5_0002020g0060 Nicotiana tabacum HOM05D001594 ORTHO05D002862 5.3e-09 65.9 100 46.0
vmacro06960 Vaccinium macrocarpon HOM05D001594 ORTHO05D002862 5.3e-09 65.9 93 45.2
arahy.Tifrunner.gnm1.ann1.0534HL Arachis hypogaea HOM05D001594 ORTHO05D002862 6.9e-09 65.5 81 46.9
Dinv05667 Davidia involucrata HOM05D001594 ORTHO05D002862 6.9e-09 65.5 95 43.2
Eucgr.J00199 Eucalyptus grandis HOM05D001594 ORTHO05D002862 6.9e-09 65.5 111 42.3
Rhsim03G0144700 Rhododendron simsii HOM05D001594 ORTHO05D002862 6.9e-09 65.5 107 42.1
unitig_0.g243 Utricularia gibba HOM05D001594 ORTHO05D002862 6.9e-09 65.5 94 47.9
Cfa017193 Carpinus fangiana HOM05D001594 ORTHO05D002862 9.0e-09 65.1 95 46.3
FAN09G2159 Fragaria x ananassa HOM05D001594 ORTHO05D002862 9.0e-09 65.1 107 37.4
Lsat_1_v5_gn_8_11660 Lactuca sativa HOM05D001594 ORTHO05D002862 9.0e-09 65.1 94 44.7
Nitab4.5_0005018g0040 Nicotiana tabacum HOM05D001594 ORTHO05D002862 9.0e-09 65.1 98 46.9
QL07p035246 Quercus lobata HOM05D001594 ORTHO05D002862 9.0e-09 65.1 94 44.7
Cc06_g01220 Coffea canephora HOM05D001594 ORTHO05D002862 1.2e-08 64.7 89 43.8
Nitab4.5_0012190g0010 Nicotiana tabacum HOM05D001594 ORTHO05D002862 1.2e-08 64.7 93 47.3
Potri.016G117700 Populus trichocarpa HOM05D001594 ORTHO05D002862 1.5e-08 64.3 95 43.2
BolC9t59883H Brassica oleracea HOM05D001594 ORTHO05D002862 2.0e-08 63.9 112 42.9
Sabra08G0051300 Salix brachista HOM05D001594 ORTHO05D002862 2.0e-08 63.9 92 44.6
TAR369G0238 Trochodendron aralioides HOM05D001594 ORTHO05D002862 2.0e-08 63.9 87 46.0
MD04G1155600 Malus domestica HOM05D001594 ORTHO05D002862 2.6e-08 63.5 108 35.2
MD12G1168800 Malus domestica HOM05D001594 ORTHO05D002862 2.6e-08 63.5 97 42.3
Pp3c17_18320 Physcomitrium patens HOM05D001594 ORTHO05D002862 2.6e-08 63.5 96 40.6
Prupe.6G279100 Prunus persica HOM05D001594 ORTHO05D002862 3.4e-08 63.2 100 40.0
Solyc09g005600.3 Solanum lycopersicum HOM05D001594 ORTHO05D002862 3.4e-08 63.2 101 46.5
SGA_v2.0_scaffold76G25115 Striga asiatica HOM05D001594 ORTHO05D002862 3.4e-08 63.2 75 49.3
Aqoxy4G02529 Aquilegia oxysepala HOM05D001594 ORTHO05D002862 4.5e-08 62.8 75 48.0
ECA233G4237 Erigeron canadensis HOM05D001594 ORTHO05D002862 4.5e-08 62.8 96 43.8
Nitab4.5_0000261g0050 Nicotiana tabacum HOM05D001594 ORTHO05D002862 4.5e-08 62.8 100 45.0
Potri.006G101600 Populus trichocarpa HOM05D001594 ORTHO05D002862 4.5e-08 62.8 96 43.8
TWI74G0921 Tripterygium wilfordii HOM05D001594 ORTHO05D002862 4.5e-08 62.8 112 41.1
Migut.F01397 Erythranthe guttata HOM05D001594 ORTHO05D002862 5.8e-08 62.4 93 43.0
Eucgr.A00527 Eucalyptus grandis HOM05D001594 ORTHO05D002862 5.8e-08 62.4 97 45.4
Lsat_1_v5_gn_9_35340 Lactuca sativa HOM05D001594 ORTHO05D002862 5.8e-08 62.4 105 40.0
Hund10997 Selenicereus undatus HOM05D001594 ORTHO05D002862 5.8e-08 62.4 96 43.8
PGSC0003DMG402008471 Solanum tuberosum HOM05D001594 ORTHO05D002862 5.8e-08 62.4 92 45.7
AUR62012263 Chenopodium quinoa HOM05D001594 ORTHO05D002862 7.6e-08 62.0 105 42.9
Sopen09g001500 Solanum pennellii HOM05D001594 ORTHO05D002862 7.6e-08 62.0 101 46.5
Ah.12g058730 Amaranthus hybridus HOM05D001594 ORTHO05D002862 9.9e-08 61.6 91 45.1
AUR62022896 Chenopodium quinoa HOM05D001594 ORTHO05D002862 9.9e-08 61.6 105 42.9
Sc14g0005470 Simmondsia chinensis HOM05D001594 ORTHO05D002862 1.3e-07 61.2 90 45.6
Solyc06g051380.3 Solanum lycopersicum HOM05D001594 ORTHO05D002862 1.3e-07 61.2 94 45.7
EL10Ac5g12548 Beta vulgaris HOM05D001594 ORTHO05D002862 1.7e-07 60.8 105 43.8
Peaxi162Scf00170g00123 Petunia axillaris HOM05D001594 ORTHO05D002862 2.2e-07 60.5 98 44.9
ECA247G0278 Erigeron canadensis HOM05D001594 ORTHO05D002862 2.9e-07 60.1 89 46.1
Sopen06g017360 Solanum pennellii HOM05D001594 ORTHO05D002862 2.9e-07 60.1 87 47.1
Cpa.g.sc11.112 Carica papaya HOM05D001594 ORTHO05D002862 4.9e-07 59.3 103 39.8
Prupe.2G251300 Prunus persica HOM05D001594 ORTHO05D002862 4.9e-07 59.3 98 40.8
Sabra16G0114000 Salix brachista HOM05D001594 ORTHO05D002862 4.9e-07 59.3 108 36.1
TWI09G1043 Tripterygium wilfordii HOM05D001594 ORTHO05D002862 4.9e-07 59.3 93 41.9
Potri.010G187700 Populus trichocarpa HOM05D001594 ORTHO05D002862 6.4e-07 58.9 100 38.0
Sabra16G0113800 Salix brachista HOM05D001594 ORTHO05D002862 1.1e-06 58.2 103 35.0
Aa31LG11G6630 Aethionema arabicum HOM05D001594 ORTHO05D002862 1.4e-06 57.8 74 45.9
AUR62030802 Chenopodium quinoa HOM05D001594 ORTHO05D002862 1.9e-06 57.4 86 47.7
unitig_26.g9086 Utricularia gibba HOM05D001594 ORTHO05D002862 1.9e-06 57.4 92 39.1
Zm00001eb397030 Zea mays HOM05D001594 ORTHO05D002862 1.9e-06 57.4 97 41.2
HanXRQChr08g0221751 Helianthus annuus HOM05D001594 ORTHO05D002862 2.4e-06 57.0 85 45.9
MD01G1154200 Malus domestica HOM05D001594 ORTHO05D002862 2.4e-06 57.0 100 41.0
EL10Ac2g04845 Beta vulgaris HOM05D001594 ORTHO05D002862 4.2e-06 56.2 100 38.0
CAN.G740.5 Capsicum annuum HOM05D001594 ORTHO05D000105 4.2e-06 56.2 86 46.5
Nn2g10868 Nelumbo nucifera HOM05D001594 ORTHO05D002862 4.2e-06 56.2 93 39.8
PGR044G1719 Punica granatum HOM05D001594 ORTHO05D002862 4.2e-06 56.2 77 44.2
Cc02_g06390 Coffea canephora HOM05D001594 ORTHO05D002862 7.1e-06 55.5 94 40.4


User provided reference genes

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