Gene: Solyc09g005600.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc09g005600.3
  • Transcript Identifier Solyc09g005600.3.1
  • Gene Type Coding gene
  • Location SL4.0ch09 : 408359-422522 : negative

Gene Family Information

  • ID HOM05D001594
  • #Genes/#Species 404/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc09g005600.3.1
  • uniprot A0A3Q7IRW5
  • gene_id Solyc09g005600

Descriptions

  • Description Transducin family protein / WD-40 repeat family protein (AHRD V3.3 *** F4K0R0_ARATH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0050790
IEA
GOA Databaseregulation of catalytic activity
GO:0017157
IBA
GOA Databaseregulation of exocytosis
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT5G05570

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0045159
IBA
GOA Databasemyosin II binding
GO:0005096
IBA
GOA DatabaseGTPase activator activity
GO:0019905
IBA
GOA Databasesyntaxin binding
GO:0000149
ISO
PLAZA Integrative OrthologySNARE binding AT5G05570

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016021
IEA
InterProintegral component of membrane
GO:0005886
IBA
GOA Databaseplasma membrane
GO:0005737
IBA
GOA Databasecytoplasm
GO:0005802
ISO
PLAZA Integrative Orthologytrans-Golgi network AT5G05570
GO:0005770
ISO
PLAZA Integrative Orthologylate endosome AT5G05570

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036322 WD40-repeat-containing domain superfamily
IPR001388 Synaptobrevin
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily
IPR001680 WD40 repeat
Mapman id Description
22.3.5.2.3 Vesicle trafficking.post-Golgi trafficking.target membrane fusion.regulation.regulatory protein (TMS)