Gene: Sopen09g001500

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen09g001500
  • Transcript Identifier Sopen09g001500.2
  • Gene Type Coding gene
  • Location Spenn-ch09 : 404233-418416 : negative

Gene Family Information

  • ID HOM05D001594
  • #Genes/#Species 404/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen09g001500.2

Descriptions

  • Description transducin family protein / WD-40 repeat family protein | FUNCTIONS IN: methyltransferase activity, nucleotide binding, nucleic acid binding | INVOLVED IN: vesicle-mediated transport, methylation | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain , WD40 repeat , WD40/YVTN repeat-like-containing domain , DNA methylase, N-6 adenine-specific, conserved site , WD40 repeat, subgroup , Synaptobrevin | BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein .
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT5G05570

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0000149
ISO
PLAZA Integrative OrthologySNARE binding AT5G05570

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
InterProintegral component of membrane
GO:0005802
ISO
PLAZA Integrative Orthologytrans-Golgi network AT5G05570
GO:0005770
ISO
PLAZA Integrative Orthologylate endosome AT5G05570
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G05570

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036322 WD40-repeat-containing domain superfamily
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR001388 Synaptobrevin
IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily
IPR001680 WD40 repeat
Mapman id Description
22.3.5.2.3 Vesicle trafficking.post-Golgi trafficking.target membrane fusion.regulation.regulatory protein (TMS)