Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0120s0055 Marchantia polymorpha HOM05D005074 ORTHO05D006853 0.0e+00 1490.3 751 100.0
MBI03_g18944_MAGBIO Magnolia biondii HOM05D005074 ORTHO05D006853 1.9e-176 623.6 755 46.1
Ca_13410_v3 Cicer arietinum L. HOM05D005074 ORTHO05D006853 2.9e-172 609.8 753 45.7
Ca_13419_v3 Cicer arietinum L. HOM05D005074 ORTHO05D006853 2.9e-172 609.8 753 45.7
SMO119G0484 Selaginella moellendorffii HOM05D005074 ORTHO05D006853 1.9e-171 607.1 737 44.5
arahy.Tifrunner.gnm1.ann1.N71AR0 Arachis hypogaea HOM05D005074 ORTHO05D006853 7.1e-171 605.1 764 45.2
Medtr1g024820 Medicago truncatula HOM05D005074 ORTHO05D006853 1.0e-169 601.3 769 45.0
Psat6g003720 Pisum sativum HOM05D005074 ORTHO05D006853 1.0e-169 601.3 753 44.2
TPR.G34365 Trifolium pratense HOM05D005074 ORTHO05D006853 1.0e-169 601.3 759 44.4
Pp3c11_18160 Physcomitrium patens HOM05D005074 ORTHO05D006853 2.3e-169 600.1 761 44.8
PGSC0003DMG400006257 Solanum tuberosum HOM05D005074 ORTHO05D006853 8.7e-169 598.2 743 47.2
TAR633G0154 Trochodendron aralioides HOM05D005074 ORTHO05D006853 1.1e-168 597.8 755 45.4
MD04G1160300 Malus domestica HOM05D005074 ORTHO05D006853 3.3e-168 596.3 752 44.3
Solyc09g005100.4 Solanum lycopersicum HOM05D005074 ORTHO05D006853 3.3e-168 596.3 743 46.8
Peaxi162Scf01132g00134 Petunia axillaris HOM05D005074 ORTHO05D006853 9.6e-168 594.7 738 46.3
Sopen09g001080 Solanum pennellii HOM05D005074 ORTHO05D006853 1.3e-167 594.3 743 46.7
RcHm_v2.0_Chr3g0462521 Rosa chinensis HOM05D005074 ORTHO05D006853 1.6e-167 594.0 772 44.3
Dinv13134 Davidia involucrata HOM05D005074 ORTHO05D006853 2.8e-167 593.2 770 44.4
CiPaw.10G158300 Carya illinoinensis HOM05D005074 ORTHO05D006853 6.3e-167 592.0 764 44.0
Prupe.6G280900 Prunus persica HOM05D005074 ORTHO05D006853 6.3e-167 592.0 757 45.2
ClCG10G022350 Citrullus lanatus HOM05D005074 ORTHO05D006853 8.2e-167 591.7 765 44.3
Lj5g0028092 Lotus japonicus HOM05D005074 ORTHO05D006853 1.1e-166 591.3 764 45.4
Nn2g10923 Nelumbo nucifera HOM05D005074 ORTHO05D006853 1.8e-166 590.5 737 45.6
QL08p015889 Quercus lobata HOM05D005074 ORTHO05D006853 2.4e-166 590.1 759 44.8
CsaV3_3G033540 Cucumis sativus L. HOM05D005074 ORTHO05D006853 4.1e-166 589.3 758 44.6
MELO3C009144.2 Cucumis melo HOM05D005074 ORTHO05D006853 5.3e-166 589.0 758 44.5
Glyma.01G117800 Glycine max HOM05D005074 ORTHO05D006853 5.3e-166 589.0 760 44.6
Zm00001eb013510 Zea mays HOM05D005074 ORTHO05D006853 5.3e-166 589.0 758 43.5
Haze_21033 Corylus avellana HOM05D005074 ORTHO05D006853 1.2e-165 587.8 762 44.5
Lj2C71T3 Lonicera japonica HOM05D005074 ORTHO05D006853 2.0e-165 587.0 749 45.0
Phvul.010G073200 Phaseolus vulgaris HOM05D005074 ORTHO05D006853 2.0e-165 587.0 751 45.0
Lalb_Chr07g0191391 Lupinus albus HOM05D005074 ORTHO05D006853 2.6e-165 586.6 748 44.9
FvH4_6g11090 Fragaria vesca HOM05D005074 ORTHO05D006853 3.4e-165 586.3 761 44.8
Potri.016G120200 Populus trichocarpa HOM05D005074 ORTHO05D006853 4.5e-165 585.9 763 45.1
Nitab4.5_0012964g0020 Nicotiana tabacum HOM05D005074 ORTHO05D006853 1.0e-164 584.7 741 45.6
Actinidia29087 Actinidia chinensis HOM05D005074 ORTHO05D006853 3.8e-164 582.8 761 44.8
Nitab4.5_0000195g0210 Nicotiana tabacum HOM05D005074 ORTHO05D006853 5.0e-164 582.4 740 46.1
PSO384G2802 Papaver somniferum HOM05D005074 ORTHO05D006853 6.5e-164 582.0 772 44.7
AL6G10830 Arabidopsis lyrata HOM05D005074 ORTHO05D006853 1.1e-163 581.3 733 45.4
Cfa017171 Carpinus fangiana HOM05D005074 ORTHO05D006853 1.4e-163 580.9 760 43.8
Sabra16G0116100 Salix brachista HOM05D005074 ORTHO05D006853 1.4e-163 580.9 775 44.8
CANSAT35G1267 Cannabis sativa HOM05D005074 ORTHO05D006853 2.5e-163 580.1 751 43.8
VMungo0331G1905 Vigna mungo HOM05D005074 ORTHO05D006853 2.5e-163 580.1 760 44.1
Carub.0006s0050 Capsella rubella HOM05D005074 ORTHO05D006853 4.2e-163 579.3 746 45.2
GSVIVG01003941001 Vitis vinifera HOM05D005074 ORTHO05D006853 4.2e-163 579.3 734 45.2
HanXRQChr12g0383191 Helianthus annuus HOM05D005074 ORTHO05D006853 7.2e-163 578.6 744 43.7
Cc06_g01060 Coffea canephora HOM05D005074 ORTHO05D006853 1.6e-162 577.4 764 44.2
AT5G01310 Arabidopsis thaliana HOM05D005074 ORTHO05D006853 2.1e-162 577.0 734 45.1
CAN.G41.5 Capsicum annuum HOM05D005074 ORTHO05D006853 2.7e-162 576.6 742 45.1
FAN14G3962 Fragaria x ananassa HOM05D005074 ORTHO05D006853 2.7e-162 576.6 771 44.4
Ciclev10011130m.g Citrus clementina HOM05D005074 ORTHO05D006853 3.5e-162 576.2 758 43.5
FAN02G3586 Fragaria x ananassa HOM05D005074 ORTHO05D006853 3.5e-162 576.2 782 43.4
Sp6g40630 Schrenkiella parvula HOM05D005074 ORTHO05D006853 3.0e-161 573.2 733 45.4
THA.LOC104816650 Tarenaya hassleriana HOM05D005074 ORTHO05D006853 3.0e-161 573.2 737 44.8
A10p33710 Brassica napus HOM05D005074 ORTHO05D006853 3.9e-161 572.8 739 44.7
DCAR_006624 Daucus carota HOM05D005074 ORTHO05D006853 3.9e-161 572.8 788 42.6
TWI74G0571 Tripterygium wilfordii HOM05D005074 ORTHO05D006853 3.9e-161 572.8 771 44.0
Aqoxy4G02460 Aquilegia oxysepala HOM05D005074 ORTHO05D006853 5.1e-161 572.4 788 42.0
CSS0046053 Camellia sinensis var. sinensis HOM05D005074 ORTHO05D006853 1.5e-160 570.9 748 43.7
FAN05G5223 Fragaria x ananassa HOM05D005074 ORTHO05D006853 1.9e-160 570.5 770 43.5
Sed0022379 Sechium edule HOM05D005074 ORTHO05D006853 1.9e-160 570.5 751 42.2
BraA10t45403Z Brassica rapa HOM05D005074 ORTHO05D006853 2.5e-160 570.1 739 44.5
EL10Ac5g12524 Beta vulgaris HOM05D005074 ORTHO05D006853 3.3e-160 569.7 761 43.6
Duzib128G0037 Durio zibethinus HOM05D005074 ORTHO05D006853 4.3e-160 569.3 750 44.3
PSO339G4313 Papaver somniferum HOM05D005074 ORTHO05D006853 5.7e-160 568.9 753 44.2
CSS0047541 Camellia sinensis var. sinensis HOM05D005074 ORTHO05D006853 7.4e-160 568.5 748 43.6
PGR031G0257 Punica granatum HOM05D005074 ORTHO05D006853 1.3e-159 567.8 745 44.3
Ah.02g115540 Amaranthus hybridus HOM05D005074 ORTHO05D006853 1.6e-159 567.4 764 44.0
BolC9t60195H Brassica oleracea HOM05D005074 ORTHO05D006853 1.4e-158 564.3 736 44.8
AUR62030501 Chenopodium quinoa HOM05D005074 ORTHO05D006853 1.8e-158 563.9 755 43.0
COL.COLO4_14500 Corchorus olitorius HOM05D005074 ORTHO05D006853 3.1e-158 563.1 949 38.8
Hma1.2p1_0501F.1_g167650 Hydrangea macrophylla HOM05D005074 ORTHO05D006853 3.1e-158 563.1 747 43.5
Aa31LG1G22940 Aethionema arabicum HOM05D005074 ORTHO05D006853 5.3e-158 562.4 745 43.1
CARHR211670 Cardamine hirsuta HOM05D005074 ORTHO05D006853 6.9e-158 562.0 736 44.4
Gohir.A04G093700 Gossypium hirsutum HOM05D005074 ORTHO05D006853 2.0e-157 560.5 750 42.7
Gorai.012G116900 Gossypium raimondii HOM05D005074 ORTHO05D006853 2.6e-157 560.1 756 42.5
C09p74610 Brassica napus HOM05D005074 ORTHO05D006853 3.4e-157 559.7 736 44.6
Gohir.D04G133000 Gossypium hirsutum HOM05D005074 ORTHO05D006853 5.9e-157 558.9 750 42.7
SGA_v2.0_scaffold85G26714 Striga asiatica HOM05D005074 ORTHO05D006853 1.3e-156 557.8 740 44.6
MSTRG.18991 Avicennia marina HOM05D005074 ORTHO05D006853 8.5e-156 555.1 762 43.4
ATR0716G066 Amborella trichopoda HOM05D005074 ORTHO05D006853 1.1e-155 554.7 857 40.0
Rhsim05G0219800 Rhododendron simsii HOM05D005074 ORTHO05D006853 9.4e-155 551.6 740 43.5
Hund10968 Selenicereus undatus HOM05D005074 ORTHO05D006853 2.7e-154 550.1 755 43.8
Thecc.05G011500 Theobroma cacao HOM05D005074 ORTHO05D006853 1.5e-152 544.3 950 38.5
Thhalv10012562m.g Eutrema salsugineum HOM05D005074 ORTHO05D006853 7.4e-152 542.0 777 42.1
BcaC06g31973 Brassica carinata HOM05D005074 ORTHO05D006853 1.7e-151 540.8 742 42.7
HPP92_025102 Vanilla planifolia HOM05D005074 ORTHO05D006853 4.8e-151 539.3 725 43.0
Migut.J00131 Erythranthe guttata HOM05D005074 ORTHO05D006853 1.1e-147 528.1 731 43.6
SalBow5G0276 Salvia bowleyana HOM05D005074 ORTHO05D006853 1.1e-147 528.1 734 43.2
AUR62030792 Chenopodium quinoa HOM05D005074 ORTHO05D006853 1.9e-147 527.3 745 42.3
SalBow5G3519 Salvia bowleyana HOM05D005074 ORTHO05D006853 4.2e-147 526.2 734 42.5
unitig_27.g24848 Utricularia gibba HOM05D005074 ORTHO05D006853 1.4e-145 521.2 779 40.7
CDE08G0259 Ceratophyllum demersum HOM05D005074 ORTHO05D006853 2.6e-141 506.9 744 40.6
Eucgr.A00552 Eucalyptus grandis HOM05D005074 ORTHO05D006853 1.3e-140 504.6 693 42.0
Lsat_1_v5_gn_8_100780 Lactuca sativa HOM05D005074 ORTHO05D006853 6.1e-138 495.7 739 40.3
Manes.09G106200 Manihot esculenta HOM05D005074 ORTHO05D006853 3.7e-135 486.5 653 42.6
Atru.chr8.2282 Acer truncatum HOM05D005074 ORTHO05D006853 3.6e-130 469.9 661 43.3
vmacro20302 Vaccinium macrocarpon HOM05D005074 ORTHO05D006853 5.4e-126 456.1 751 39.8
Hma1.2p1_0501F.1_g167660 Hydrangea macrophylla HOM05D005074 ORTHO05D006853 3.6e-122 443.4 516 47.1
ECA236G3605 Erigeron canadensis HOM05D005074 ORTHO05D006853 3.1e-118 430.3 640 41.1
Os03g0293400 Oryza sativa ssp. japonica HOM05D005074 ORTHO05D006853 6.8e-105 386.0 451 47.0
FAN09G4669 Fragaria x ananassa HOM05D005074 ORTHO05D006853 1.6e-101 374.8 624 39.1
Sc22g0002590 Simmondsia chinensis HOM05D005074 ORTHO05D006853 3.5e-101 373.6 424 48.3
arahy.Tifrunner.gnm1.ann1.W8IS2K Arachis hypogaea HOM05D005074 ORTHO05D006853 1.9e-99 367.9 423 48.2
AagrBONN_evm.TU.Sc2ySwM_362.194 Anthoceros agrestis HOM05D005074 ORTHO05D006853 8.1e-98 362.5 432 45.8
Cpa.g.sc120.24 Carica papaya HOM05D005074 ORTHO05D006853 1.9e-83 314.7 754 30.9
Aa31LG1G22950 Aethionema arabicum HOM05D005074 ORTHO05D006853 2.8e-82 310.8 631 36.1
CBR_g45475 Chara braunii HOM05D005074 ORTHO05D006853 3.5e-77 293.9 995 27.3
Aa31LG8G1910 Aethionema arabicum HOM05D005074 ORTHO05D006853 2.4e-73 281.2 461 38.2
Aa31LG1G22960 Aethionema arabicum HOM05D005074 ORTHO05D006853 4.6e-69 266.9 387 41.6
FAN09G0802 Fragaria x ananassa HOM05D005074 ORTHO05D006853 3.9e-60 237.3 269 50.6
SHI12858 Sapria himalayana HOM05D005074 ORTHO05D006853 1.1e-54 219.2 316 43.4
AagrBONN_evm.TU.Sc2ySwM_344.4419 Anthoceros agrestis HOM05D005074 ORTHO05D006853 7.9e-53 213.0 165 60.0
BcaC06g31962 Brassica carinata HOM05D005074 ORTHO05D006853 8.7e-44 183.0 144 59.0
FAN09G1779 Fragaria x ananassa HOM05D005074 ORTHO05D006853 1.8e-41 175.3 284 39.8
FAN09G0145 Fragaria x ananassa HOM05D005074 ORTHO05D006853 5.9e-40 170.2 300 37.7
RcHm_v2.0_Chr3g0462501 Rosa chinensis HOM05D005074 ORTHO05D006853 1.1e-38 166.0 273 39.9
Cre06.g297904 Chlamydomonas reinhardtii HOM05D005074 ORTHO05D006853 1.9e-38 165.2 734 24.7
Glyma.U000401 Glycine max HOM05D005074 ORTHO05D006853 4.8e-34 150.6 127 55.9
MD05G1095500 Malus domestica HOM05D005074 ORTHO05D006853 1.5e-32 145.6 150 46.7
Oeu063389.1 Olea europaea HOM05D005074 ORTHO05D006853 1.0e-31 142.9 155 46.5
Oeu033574.2 Olea europaea HOM05D005074 ORTHO05D006853 2.2e-31 141.7 290 33.8
Duzib093G1335 Durio zibethinus HOM05D005074 ORTHO05D006853 1.2e-29 136.0 235 37.4
Aa31sc2673G10 Aethionema arabicum HOM05D005074 ORTHO05D006853 2.3e-28 131.7 259 32.8
MD12G1172800 Malus domestica HOM05D005074 ORTHO05D006853 5.2e-28 130.6 235 36.6
Aa31LG1G22970 Aethionema arabicum HOM05D005074 ORTHO05D006853 6.3e-26 123.6 115 53.9
MCO14G225 Micromonas commoda HOM05D005074 ORTHO05D006853 1.2e-24 119.4 192 37.5
Ca_06765_v3 Cicer arietinum L. HOM05D005074 ORTHO05D006853 1.2e-21 109.4 199 36.7
Aa31sc1955G20 Aethionema arabicum HOM05D005074 ORTHO05D006853 1.8e-20 105.5 103 52.4
Glyma.U000501 Glycine max HOM05D005074 ORTHO05D006853 2.2e-18 98.6 118 47.5
Medtr8g092520 Medicago truncatula HOM05D005074 ORTHO05D006853 1.5e-14 85.9 64 68.8
Medtr1g024155 Medicago truncatula HOM05D005074 ORTHO05D006853 1.9e-14 85.5 101 52.5
Rhsim05G0219600 Rhododendron simsii HOM05D005074 ORTHO05D006853 7.0e-09 67.0 129 39.5
Cfa025975 Carpinus fangiana HOM05D005074 ORTHO05D006853 2.7e-08 65.1 188 29.8
PSO675G8941 Papaver somniferum HOM05D005074 ORTHO05D006853 1.7e-07 62.4 121 32.2


User provided reference genes

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