Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0101s0063 Marchantia polymorpha HOM05D006029 ORTHO05D007439 7.1e-59 230.3 111 100.0
Pp3c15_5550 Physcomitrium patens HOM05D006029 ORTHO05D007439 3.1e-46 188.3 111 75.7
AagrBONN_evm.TU.Sc2ySwM_117.3630 Anthoceros agrestis HOM05D006029 ORTHO05D007439 2.9e-44 181.8 111 72.1
CBR_g49523 Chara braunii HOM05D006029 ORTHO05D007439 6.2e-39 164.1 98 72.4
Cre02.g102400 Chlamydomonas reinhardtii HOM05D006029 ORTHO05D007439 5.4e-35 151.0 109 61.5
SMO159G0009 Selaginella moellendorffii HOM05D006029 ORTHO05D007439 5.4e-35 151.0 109 64.2
MCO11G240 Micromonas commoda HOM05D006029 ORTHO05D007439 3.5e-34 148.3 111 59.5
CBR_g31408 Chara braunii HOM05D006029 ORTHO05D007439 1.6e-31 139.4 73 82.2
SMO347G0197 Selaginella moellendorffii HOM05D006029 ORTHO05D007439 1.1e-30 136.7 109 58.7
Os02g0672700 Oryza sativa ssp. japonica HOM05D006029 ORTHO05D007439 9.9e-29 130.2 109 51.4
HPP92_017871 Vanilla planifolia HOM05D006029 ORTHO05D007439 4.9e-28 127.9 109 52.3
ATR0751G147 Amborella trichopoda HOM05D006029 ORTHO05D007439 2.7e-26 122.1 109 47.7
Nn1g00349 Nelumbo nucifera HOM05D006029 ORTHO05D007439 2.7e-26 122.1 111 51.4
TAR374G1259 Trochodendron aralioides HOM05D006029 ORTHO05D007439 7.9e-26 120.6 111 52.3
Sed0019070 Sechium edule HOM05D006029 ORTHO05D007439 1.3e-25 119.8 111 49.5
Sed0007850 Sechium edule HOM05D006029 ORTHO05D007439 1.8e-25 119.4 111 51.4
ClCG10G013250 Citrullus lanatus HOM05D006029 ORTHO05D007439 5.1e-25 117.9 111 49.5
MELO3C026899.2 Cucumis melo HOM05D006029 ORTHO05D007439 5.1e-25 117.9 111 49.5
CsaV3_3G043380 Cucumis sativus L. HOM05D006029 ORTHO05D007439 5.1e-25 117.9 111 49.5
PRCOL_00000799 Prasinoderma coloniale HOM05D006029 ORTHO05D007439 3.3e-24 115.2 130 47.7
GSVIVG01027190001 Vitis vinifera HOM05D006029 ORTHO05D007439 1.3e-23 113.2 111 49.5
Zm00001eb187060 Zea mays HOM05D006029 ORTHO05D007439 2.1e-23 112.5 109 45.0
CiPaw.02G042300 Carya illinoinensis HOM05D006029 ORTHO05D007439 2.8e-23 112.1 111 48.6
Oeu043218.1 Olea europaea HOM05D006029 ORTHO05D007439 3.7e-23 111.7 111 45.9
DCAR_006981 Daucus carota HOM05D006425 ORTHO05D007312 6.2e-23 110.9 111 50.5
vmacro12594 Vaccinium macrocarpon HOM05D006029 ORTHO05D007439 6.2e-23 110.9 111 49.5
Glyma.07G131200 Glycine max HOM05D006029 ORTHO05D007439 1.1e-22 110.2 113 48.7
Glyma.18G179600 Glycine max HOM05D006029 ORTHO05D007439 1.4e-22 109.8 113 47.8
Psat3g005240 Pisum sativum HOM05D006029 ORTHO05D007439 1.8e-22 109.4 113 44.2
Phvul.008G101000 Phaseolus vulgaris HOM05D006029 ORTHO05D007439 4.0e-22 108.2 111 45.9
Sabra12G0016400 Salix brachista HOM05D006029 ORTHO05D007439 5.3e-22 107.8 111 46.8
unitig_60.g25801 Utricularia gibba HOM05D006029 ORTHO05D007439 5.3e-22 107.8 113 46.9
Rhsim01G0175700 Rhododendron simsii HOM05D006029 ORTHO05D007439 6.9e-22 107.5 111 47.7
Potri.012G015900 Populus trichocarpa HOM05D006029 ORTHO05D007439 9.0e-22 107.1 111 46.8
Cfa010653 Carpinus fangiana HOM05D006029 ORTHO05D007439 1.2e-21 106.7 111 45.9
Manes.01G243500 Manihot esculenta HOM05D006029 ORTHO05D007439 1.2e-21 106.7 111 45.9
TWI36G0126 Tripterygium wilfordii HOM05D006029 ORTHO05D007439 1.5e-21 106.3 111 45.0
AagrBONN_evm.TU.Sc2ySwM_344.301 Anthoceros agrestis HOM05D006029 ORTHO05D007439 2.6e-21 105.5 67 77.6
Aqoxy4G03109 Aquilegia oxysepala HOM05D006029 ORTHO05D007439 2.6e-21 105.5 109 45.9
Gohir.D08G145300 Gossypium hirsutum HOM05D006029 ORTHO05D007439 2.6e-21 105.5 111 45.9
Gorai.004G150300 Gossypium raimondii HOM05D006029 ORTHO05D007439 2.6e-21 105.5 111 45.9
Hma1.2p1_1482F.1_g286210 Hydrangea macrophylla HOM05D006029 ORTHO05D007439 3.4e-21 105.1 111 46.8
Lj1g0014790 Lotus japonicus HOM05D006029 ORTHO05D007439 3.4e-21 105.1 111 44.1
Lj1g0022243 Lotus japonicus HOM05D006029 ORTHO05D007439 3.4e-21 105.1 111 44.1
arahy.Tifrunner.gnm1.ann1.A8XVJK Arachis hypogaea HOM05D006029 ORTHO05D007439 4.5e-21 104.8 111 43.2
arahy.Tifrunner.gnm1.ann1.ZU3BRN Arachis hypogaea HOM05D006029 ORTHO05D007439 4.5e-21 104.8 111 43.2
CAN.G694.9 Capsicum annuum HOM05D006029 ORTHO05D007439 4.5e-21 104.8 111 46.8
Peaxi162Scf00156g00617 Petunia axillaris HOM05D006029 ORTHO05D007439 5.8e-21 104.4 111 46.8
Gohir.D12G270400 Gossypium hirsutum HOM05D006029 ORTHO05D007439 7.6e-21 104.0 111 45.0
Gorai.008G290700 Gossypium raimondii HOM05D006029 ORTHO05D007439 7.6e-21 104.0 111 45.0
COL.COLO4_06245 Corchorus olitorius HOM05D006029 ORTHO05D007439 1.0e-20 103.6 111 45.9
Eucgr.E03439 Eucalyptus grandis HOM05D006029 ORTHO05D007439 1.0e-20 103.6 111 46.8
Eucgr.E03441 Eucalyptus grandis HOM05D006029 ORTHO05D007439 1.0e-20 103.6 111 46.8
Eucgr.E03442 Eucalyptus grandis HOM05D006029 ORTHO05D007439 1.0e-20 103.6 111 46.8
Eucgr.L01751 Eucalyptus grandis HOM05D006029 ORTHO05D007439 1.0e-20 103.6 111 46.8
Aa31LG1G10580 Aethionema arabicum HOM05D006029 ORTHO05D007439 1.3e-20 103.2 111 49.5
Gohir.A08G124200 Gossypium hirsutum HOM05D006029 ORTHO05D007439 1.3e-20 103.2 111 45.0
Duzib138G0795 Durio zibethinus HOM05D006029 ORTHO05D007439 2.2e-20 102.4 111 45.0
PGR102G2016 Punica granatum HOM05D006029 ORTHO05D007439 3.8e-20 101.7 111 45.9
EL10Ac5g10924 Beta vulgaris HOM05D006029 ORTHO05D007439 4.9e-20 101.3 112 48.2
Thecc.01G338500 Theobroma cacao HOM05D006029 ORTHO05D007439 4.9e-20 101.3 113 46.0
AT4G07950 Arabidopsis thaliana HOM05D006029 ORTHO05D007439 6.5e-20 100.9 111 48.6
Gohir.A12G269900 Gossypium hirsutum HOM05D006029 ORTHO05D007439 1.1e-19 100.1 111 44.1
Solyc05g055890.3 Solanum lycopersicum HOM05D006029 ORTHO05D007439 1.1e-19 100.1 111 44.1
Sopen05g034290 Solanum pennellii HOM05D006029 ORTHO05D007439 1.1e-19 100.1 111 44.1
THA.LOC104815886 Tarenaya hassleriana HOM05D006029 ORTHO05D007439 1.1e-19 100.1 111 48.6
Cpa.g.sc96.66 Carica papaya HOM05D006029 ORTHO05D007439 1.4e-19 99.8 111 46.8
PGSC0003DMG402023468 Solanum tuberosum HOM05D006029 ORTHO05D007439 1.4e-19 99.8 111 44.1
Sc02g0002910 Simmondsia chinensis HOM05D006029 ORTHO05D007439 1.9e-19 99.4 112 47.3
Cc00_g02440 Coffea canephora HOM05D006029 ORTHO05D007439 2.5e-19 99.0 111 45.0
Lalb_Chr04g0261421 Lupinus albus HOM05D006029 ORTHO05D007439 2.5e-19 99.0 111 41.4
AL1G11270 Arabidopsis lyrata HOM05D006029 ORTHO05D007439 3.2e-19 98.6 111 48.6
CARHR001260 Cardamine hirsuta HOM05D006029 ORTHO05D007439 3.2e-19 98.6 111 49.5
PSO170G0977 Papaver somniferum HOM05D006029 ORTHO05D007439 3.2e-19 98.6 111 41.4
PSO782G1905 Papaver somniferum HOM05D006029 ORTHO05D007439 3.2e-19 98.6 111 40.5
PSO782G2649 Papaver somniferum HOM05D006029 ORTHO05D007439 3.2e-19 98.6 111 40.5
PSO782G4464 Papaver somniferum HOM05D006029 ORTHO05D007439 3.2e-19 98.6 111 40.5
MSTRG.17362 Avicennia marina HOM05D006029 ORTHO05D007439 4.2e-19 98.2 114 45.6
Carub.0003s3000 Capsella rubella HOM05D006029 ORTHO05D007439 7.1e-19 97.4 111 47.7
AT1G01210 Arabidopsis thaliana HOM05D006029 ORTHO05D007439 9.3e-19 97.1 111 46.8
Cc06_g21100 Coffea canephora HOM05D006029 ORTHO05D007439 2.1e-18 95.9 111 43.2
Ciclev10022957m.g Citrus clementina HOM05D006029 ORTHO05D007439 2.7e-18 95.5 111 41.4
BcaC07g42429 Brassica carinata HOM05D006029 ORTHO05D007439 3.5e-18 95.1 111 49.5
A03p11160 Brassica napus HOM05D000069 ORTHO05D021930 3.5e-18 95.1 111 49.5
A09p39050 Brassica napus HOM05D006029 ORTHO05D007439 3.5e-18 95.1 111 49.5
A09p68990 Brassica napus HOM05D006029 ORTHO05D007439 3.5e-18 95.1 111 49.5
BolC3t13750H Brassica oleracea HOM05D006029 ORTHO05D007439 3.5e-18 95.1 111 49.5
BolC8t52870H Brassica oleracea HOM05D006029 ORTHO05D007439 3.5e-18 95.1 111 49.5
BraA03t10431Z Brassica rapa HOM05D006029 ORTHO05D007439 3.5e-18 95.1 111 49.5
BraA09t42236Z Brassica rapa HOM05D006029 ORTHO05D007439 3.5e-18 95.1 111 49.5
Sp1g01080 Schrenkiella parvula HOM05D006029 ORTHO05D007439 3.5e-18 95.1 111 46.8
C03p12870 Brassica napus HOM05D006029 ORTHO05D007439 4.6e-18 94.7 111 49.5
BraA09t39405Z Brassica rapa HOM05D006029 ORTHO05D007439 4.6e-18 94.7 111 49.5
Peaxi162Scf00740g00556 Petunia axillaris HOM05D006029 ORTHO05D007439 7.9e-18 94.0 102 47.1
Hund17067 Selenicereus undatus HOM05D006029 ORTHO05D007439 7.9e-18 94.0 112 45.5
CANSAT56G3403 Cannabis sativa HOM05D006029 ORTHO05D007439 1.3e-17 93.2 111 38.7
Thhalv10009170m.g Eutrema salsugineum HOM05D006029 ORTHO05D007439 1.3e-17 93.2 111 46.8
Medtr5g030180 Medicago truncatula HOM05D006029 ORTHO05D007439 1.8e-17 92.8 115 37.4
Lj3g0023283 Lotus japonicus HOM05D006029 ORTHO05D007439 5.1e-17 91.3 111 39.6
Medtr7g116750 Medicago truncatula HOM05D006029 ORTHO05D007439 5.1e-17 91.3 119 38.7
SGA_v2.0_scaffold22G09953 Striga asiatica HOM05D006029 ORTHO05D007439 6.7e-17 90.9 112 38.4
TPR.G4810 Trifolium pratense HOM05D006029 ORTHO05D007439 6.7e-17 90.9 111 37.8
CSS0011460 Camellia sinensis var. sinensis HOM05D006029 ORTHO05D007439 1.1e-16 90.1 92 47.8
Haze_03591 Corylus avellana HOM05D004263 ORTHO05D004931 1.1e-16 90.1 98 45.9
Migut.B01899 Erythranthe guttata HOM05D006029 ORTHO05D007439 4.3e-16 88.2 114 41.2
HanXRQChr05g0130881 Helianthus annuus HOM05D006029 ORTHO05D007439 5.7e-16 87.8 111 41.4
MD01G1085300 Malus domestica HOM05D006029 ORTHO05D007439 9.7e-16 87.0 109 39.4
Lsat_1_v5_gn_4_30800 Lactuca sativa HOM05D006029 ORTHO05D007439 1.3e-15 86.7 112 42.9
Prupe.2G192900 Prunus persica HOM05D006029 ORTHO05D007439 1.8e-14 82.8 109 37.6
Rhsim07G0002100 Rhododendron simsii HOM05D006029 ORTHO05D007439 1.8e-14 82.8 72 52.8
vmacro23448 Vaccinium macrocarpon HOM05D006029 ORTHO05D007439 4.2e-11 71.6 70 48.6
HanXRQChr17g0563271 Helianthus annuus HOM05D006029 ORTHO05D007439 1.2e-10 70.1 102 38.2
Lsat_1_v5_gn_7_7741 Lactuca sativa HOM05D006029 ORTHO05D007439 1.2e-10 70.1 100 39.0
Atru.chr5.715 Acer truncatum HOM05D006029 ORTHO05D007439 4.6e-10 68.2 72 40.3
Haze_15690 Corylus avellana HOM05D006029 ORTHO05D007439 1.8e-09 66.2 82 41.5
Carub.0003s3001 Capsella rubella HOM05D003869 ORTHO05D004718 2.5e-08 62.4 69 44.9
Lsat_1_v5_gn_6_63820 Lactuca sativa HOM05D006029 ORTHO05D007439 1.3e-07 60.1 136 30.1
Dinv34229 Davidia involucrata HOM05D006425 ORTHO05D007312 1.4e-06 56.6 69 43.5


User provided reference genes

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