Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0078s0064 Marchantia polymorpha HOM05D000212 ORTHO05D000225 1.2e-40 169.5 92 100.0
Pp3c2_5520 Physcomitrium patens HOM05D000212 ORTHO05D000225 9.5e-09 63.5 81 42.0
CBR_g21767 Chara braunii HOM05D000212 ORTHO05D000225 6.1e-08 60.8 76 44.7
AagrBONN_evm.TU.Sc2ySwM_228.99 Anthoceros agrestis HOM05D000212 ORTHO05D000225 1.8e-07 59.3 60 48.3
AagrBONN_evm.TU.Sc2ySwM_362.630 Anthoceros agrestis HOM05D000212 ORTHO05D000225 2.3e-07 58.9 60 48.3
Oeu011050.1 Olea europaea HOM05D000212 ORTHO05D000225 3.0e-07 58.5 73 49.3
Pp3c20_7590 Physcomitrium patens HOM05D000212 ORTHO05D000225 3.0e-07 58.5 66 47.0
Pp3c20_7680 Physcomitrium patens HOM05D000212 ORTHO05D000225 3.0e-07 58.5 66 47.0
Pp3c23_19260 Physcomitrium patens HOM05D000212 ORTHO05D000225 3.0e-07 58.5 66 47.0
SEGI_37577 Sequoiadendron giganteum HOM05D000212 ORTHO05D000225 3.0e-07 58.5 71 46.5
Cre12.g501200 Chlamydomonas reinhardtii HOM05D000212 ORTHO05D000225 4.0e-07 58.2 61 45.9
SMO172G0009 Selaginella moellendorffii HOM05D000212 ORTHO05D000225 4.0e-07 58.2 61 47.5
AagrBONN_evm.TU.Sc2ySwM_362.625 Anthoceros agrestis HOM05D000212 ORTHO05D000225 5.2e-07 57.8 71 45.1
Oeu011053.1 Olea europaea HOM05D000212 ORTHO05D000225 5.2e-07 57.8 70 50.0
Oeu011054.1 Olea europaea HOM05D000212 ORTHO05D000225 5.2e-07 57.8 70 50.0
PRCOL_00006505 Prasinoderma coloniale HOM05D000212 ORTHO05D000225 6.8e-07 57.4 61 44.3
arahy.Tifrunner.gnm1.ann1.8AJD73 Arachis hypogaea HOM05D000034 ORTHO05D000037 8.9e-07 57.0 70 44.3
CDE05G3419 Ceratophyllum demersum HOM05D000212 ORTHO05D000225 8.9e-07 57.0 62 48.4
PGR042G1978 Punica granatum HOM05D000212 ORTHO05D000225 8.9e-07 57.0 72 45.8
QL11p050772 Quercus lobata HOM05D000212 ORTHO05D000225 8.9e-07 57.0 65 49.2
arahy.Tifrunner.gnm1.ann1.3Q2X1A Arachis hypogaea HOM05D000212 ORTHO05D002824 1.2e-06 56.6 70 44.3
arahy.Tifrunner.gnm1.ann1.D9F4A4 Arachis hypogaea HOM05D000212 ORTHO05D000225 1.2e-06 56.6 70 44.3
arahy.Tifrunner.gnm1.ann1.JHJC5G Arachis hypogaea HOM05D000212 ORTHO05D002824 1.2e-06 56.6 70 44.3
CDE05G0353 Ceratophyllum demersum HOM05D005393 ORTHO05D006257 1.2e-06 56.6 62 48.4
TWI34G0187 Tripterygium wilfordii HOM05D000212 ORTHO05D000225 1.2e-06 56.6 64 45.3
Actinidia02369 Actinidia chinensis HOM05D000212 ORTHO05D000225 1.5e-06 56.2 67 47.8
Aqoxy4G00856 Aquilegia oxysepala HOM05D000212 ORTHO05D000225 1.5e-06 56.2 64 50.0
Manes.02G108700 Manihot esculenta HOM05D000212 ORTHO05D000225 1.5e-06 56.2 60 46.7
Mapoly0007s0013 Marchantia polymorpha HOM05D000212 ORTHO05D000225 1.5e-06 56.2 64 43.8
PGR119G1756 Punica granatum HOM05D000212 ORTHO05D000225 2.0e-06 55.8 68 45.6
Migut.B00076 Erythranthe guttata HOM05D000212 ORTHO05D000225 2.6e-06 55.5 56 50.0
MSTRG.16912 Avicennia marina HOM05D000212 ORTHO05D000225 3.4e-06 55.1 61 49.2
Glyma.11G079600 Glycine max HOM05D000212 ORTHO05D000225 3.4e-06 55.1 62 48.4
Sed0025160 Sechium edule HOM05D000212 ORTHO05D000225 3.4e-06 55.1 60 50.0
ATR0618G086 Amborella trichopoda HOM05D000212 ORTHO05D000225 4.4e-06 54.7 70 44.3
Aqoxy6G02877 Aquilegia oxysepala HOM05D000212 ORTHO05D000225 4.4e-06 54.7 70 42.9
Cfa007012 Carpinus fangiana HOM05D000212 ORTHO05D000225 4.4e-06 54.7 62 45.2
Duzib264G1192 Durio zibethinus HOM05D000212 ORTHO05D000225 4.4e-06 54.7 60 48.3
ECA234G2538 Erigeron canadensis HOM05D000212 ORTHO05D000225 4.4e-06 54.7 72 44.4
Peaxi162Scf00362g00541 Petunia axillaris HOM05D000212 ORTHO05D000225 4.4e-06 54.7 61 49.2
Aqoxy4G00842 Aquilegia oxysepala HOM05D000212 ORTHO05D000225 5.7e-06 54.3 64 50.0
EL10Ac1g02143 Beta vulgaris HOM05D000212 ORTHO05D000225 5.7e-06 54.3 69 36.2
CANSAT78G1233 Cannabis sativa HOM05D000212 ORTHO05D000225 5.7e-06 54.3 62 46.8
CANSAT78G2187 Cannabis sativa HOM05D000212 ORTHO05D000225 5.7e-06 54.3 60 50.0
Cfa007010 Carpinus fangiana HOM05D000212 ORTHO05D000225 5.7e-06 54.3 68 44.1
ECA233G1489 Erigeron canadensis HOM05D000212 ORTHO05D000225 5.7e-06 54.3 61 49.2
Prupe.2G100400 Prunus persica HOM05D000212 ORTHO05D000225 5.7e-06 54.3 66 43.9
QL06p051302 Quercus lobata HOM05D000212 ORTHO05D000225 5.7e-06 54.3 60 50.0
Sc08g0002880 Simmondsia chinensis HOM05D000212 ORTHO05D000225 5.7e-06 54.3 67 44.8
Actinidia22949 Actinidia chinensis HOM05D000212 ORTHO05D000225 7.5e-06 53.9 67 46.3
Aqoxy6G02136 Aquilegia oxysepala HOM05D000212 ORTHO05D000225 7.5e-06 53.9 67 46.3
MSTRG.19987 Avicennia marina HOM05D000212 ORTHO05D000225 7.5e-06 53.9 61 49.2
BcaB02g08201 Brassica carinata HOM05D000212 ORTHO05D000225 7.5e-06 53.9 62 48.4
CANSAT01G0925 Cannabis sativa HOM05D000212 ORTHO05D000225 7.5e-06 53.9 60 50.0
ClCG08G014070 Citrullus lanatus HOM05D000212 ORTHO05D000225 7.5e-06 53.9 60 48.3
Haze_03719 Corylus avellana HOM05D000212 ORTHO05D000225 7.5e-06 53.9 70 42.9
MELO3C011345.2 Cucumis melo HOM05D000212 ORTHO05D000225 7.5e-06 53.9 60 48.3
CsaV3_2G024370 Cucumis sativus L. HOM05D000212 ORTHO05D000225 7.5e-06 53.9 60 48.3
Glyma.01G163900 Glycine max HOM05D000212 ORTHO05D000225 7.5e-06 53.9 62 46.8
Lalb_Chr16g0377421 Lupinus albus HOM05D000212 ORTHO05D000225 7.5e-06 53.9 69 46.4
PSO349G0203 Papaver somniferum HOM05D000212 ORTHO05D000225 7.5e-06 53.9 56 53.6
PSO349G0222 Papaver somniferum HOM05D000212 ORTHO05D000225 7.5e-06 53.9 56 53.6
Hund14066 Selenicereus undatus HOM05D000212 ORTHO05D000225 7.5e-06 53.9 60 48.3
Sc07g0001120 Simmondsia chinensis HOM05D000212 ORTHO05D000225 7.5e-06 53.9 60 48.3
vmacro02279 Vaccinium macrocarpon HOM05D000212 ORTHO05D000225 7.5e-06 53.9 58 51.7
Cpa.g.sc26.289 Carica papaya HOM05D000212 ORTHO05D000225 9.8e-06 53.5 65 44.6
CiPaw.08G128000 Carya illinoinensis HOM05D000212 ORTHO05D000225 9.8e-06 53.5 67 44.8
Haze_22674 Corylus avellana HOM05D000212 ORTHO05D000225 9.8e-06 53.5 71 42.3
ECA247G1311 Erigeron canadensis HOM05D000212 ORTHO05D000225 9.8e-06 53.5 64 45.3
ECA247G2431 Erigeron canadensis HOM05D000212 ORTHO05D000225 9.8e-06 53.5 68 44.1
Glyma.02G045700 Glycine max HOM05D000212 ORTHO05D000225 9.8e-06 53.5 60 48.3
Glyma.16G123700 Glycine max HOM05D000212 ORTHO05D000225 9.8e-06 53.5 62 46.8
Lj2g0021209 Lotus japonicus HOM05D000212 ORTHO05D000225 9.8e-06 53.5 62 45.2
Nitab4.5_0000283g0410 Nicotiana tabacum HOM05D000212 ORTHO05D000225 9.8e-06 53.5 72 44.4
Nitab4.5_0002763g0010 Nicotiana tabacum HOM05D000212 ORTHO05D000225 9.8e-06 53.5 63 46.0
Nitab4.5_0002763g0040 Nicotiana tabacum HOM05D000212 ORTHO05D000225 9.8e-06 53.5 63 46.0
Nitab4.5_0003914g0060 Nicotiana tabacum HOM05D000212 ORTHO05D000225 9.8e-06 53.5 72 44.4
Nitab4.5_0005236g0040 Nicotiana tabacum HOM05D000212 ORTHO05D000225 9.8e-06 53.5 63 46.0
Rhsim10G0207900 Rhododendron simsii HOM05D000212 ORTHO05D000225 9.8e-06 53.5 67 46.3
Rhsim10G0208200 Rhododendron simsii HOM05D000212 ORTHO05D000225 9.8e-06 53.5 67 46.3
Rhsim11G0192400 Rhododendron simsii HOM05D000212 ORTHO05D000225 9.8e-06 53.5 58 51.7
TWI79G1659 Tripterygium wilfordii HOM05D000212 ORTHO05D000225 9.8e-06 53.5 65 46.2


User provided reference genes

Program Settings