Gene: Pp3c20_7680

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c20_7680
  • Transcript Identifier Pp3c20_7680V3.2
  • Gene Type Coding gene
  • Location Chr20 : 4758996-4759645 : positive

Gene Family Information

  • ID HOM05D000212
  • #Genes/#Species 1878/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c20_7680V3.2
  • pacid 32946585
  • alias Phpat.020G032100

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045910
ISO
PLAZA Integrative Orthologynegative regulation of DNA recombination AT1G75950
GO:0006511
IEA
InterProubiquitin-dependent protein catabolic process
GO:0007346
ISO
PLAZA Integrative Orthologyregulation of mitotic cell cycle AT3G21850
GO:0000278
ISO
PLAZA Integrative Orthologymitotic cell cycle AT1G75950
GO:0000226
ISO
PLAZA Integrative Orthologymicrotubule cytoskeleton organization AT1G75950
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT1G75950
GO:0007140
ISO
PLAZA Integrative Orthologymale meiotic nuclear division AT1G75950
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT5G42190

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G75950

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009524
ISO
PLAZA Integrative Orthologyphragmoplast AT1G75950
GO:0019005
ISO
PLAZA Integrative OrthologySCF ubiquitin ligase complex AT3G53060
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G75950
GO:0005819
ISO
PLAZA Integrative Orthologyspindle AT1G75950
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G20140
GO:0000151
ISO
PLAZA Integrative Orthologyubiquitin ligase complex AT1G75950
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G75950
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G75950
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G20140

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011333 SKP1/BTB/POZ domain superfamily
IPR036296 SKP1-like, dimerisation domain superfamily
IPR016897 S-phase kinase-associated protein 1
IPR016072 SKP1 component, dimerisation
IPR016073 SKP1 component, POZ domain
IPR001232 S-phase kinase-associated protein 1-like
Mapman id Description
19.2.2.8.1.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.target protein binding component SKP1/ASK1