Gene: MSTRG.16912

General Information

Structural Information

  • Species Avicennia marina
  • Gene Identifier MSTRG.16912
  • Transcript Identifier MSTRG.16912.1
  • Gene Type Coding gene
  • Location ScioBoG_19743_HRSCAF_19834 : 5154787-5156692 : positive

Gene Family Information

  • ID HOM05D000212
  • #Genes/#Species 1878/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • tid MSTRG.16912.1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
IEA
InterProubiquitin-dependent protein catabolic process
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT5G42190
GO:0007346
ISO
PLAZA Integrative Orthologyregulation of mitotic cell cycle AT3G21850

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G20140

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G20140
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G20140
GO:0019005
ISO
PLAZA Integrative OrthologySCF ubiquitin ligase complex AT3G53060
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G20140

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011333 SKP1/BTB/POZ domain superfamily
IPR001232 S-phase kinase-associated protein 1-like
IPR016073 SKP1 component, POZ domain
IPR016897 S-phase kinase-associated protein 1
IPR016072 SKP1 component, dimerisation
IPR036296 SKP1-like, dimerisation domain superfamily
Mapman id Description
19.2.2.8.1.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.target protein binding component SKP1/ASK1