Gene: Pp3c2_5520

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c2_5520
  • Transcript Identifier Pp3c2_5520V3.1
  • Gene Type Coding gene
  • Location Chr02 : 3635429-3637297 : positive

Gene Family Information

  • ID HOM05D000212
  • #Genes/#Species 1878/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c2_5520V3.1
  • pacid 32937112
  • alias Phypa_104499
  • alias Pp1s7_342V6
  • alias Phpat.002G025100
  • uniprot A0A2K1L0C6

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000226
ISO
PLAZA Integrative Orthologymicrotubule cytoskeleton organization AT1G75950
GO:0045910
ISO
PLAZA Integrative Orthologynegative regulation of DNA recombination AT1G75950
GO:0007346
ISO
PLAZA Integrative Orthologyregulation of mitotic cell cycle AT3G21850
GO:0000278
ISO
PLAZA Integrative Orthologymitotic cell cycle AT1G75950
GO:0006511
IEA
GOA Databaseubiquitin-dependent protein catabolic process
GO:0006511
IEA
InterProubiquitin-dependent protein catabolic process
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT1G75950
GO:0007140
ISO
PLAZA Integrative Orthologymale meiotic nuclear division AT1G75950
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT5G42190
GO:0031146
IBA
GOA DatabaseSCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0016567
IEA
GOA Databaseprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G75950
GO:0097602
IBA
IEA
GOA Databasecullin family protein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019005
ISO
PLAZA Integrative OrthologySCF ubiquitin ligase complex AT3G53060
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G75950
GO:0005819
ISO
PLAZA Integrative Orthologyspindle AT1G75950
GO:0000151
ISO
PLAZA Integrative Orthologyubiquitin ligase complex AT1G75950
GO:0009524
ISO
PLAZA Integrative Orthologyphragmoplast AT1G75950
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G75950
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G20140
GO:0005634
IBA
GOA Databasenucleus
GO:0005737
IBA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016897 S-phase kinase-associated protein 1
IPR011333 SKP1/BTB/POZ domain superfamily
IPR016072 SKP1 component, dimerisation
IPR016073 SKP1 component, POZ domain
IPR036296 SKP1-like, dimerisation domain superfamily
IPR001232 S-phase kinase-associated protein 1-like
Mapman id Description
19.2.2.8.1.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.target protein binding component SKP1/ASK1