Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0078s0010 Marchantia polymorpha HOM05D006900 ORTHO05D008651 0.0e+00 1129.0 856 100.0
Pp3c1_20310 Physcomitrium patens HOM05D006900 ORTHO05D008651 1.6e-46 192.2 536 70.9
SEGI_12330 Sequoiadendron giganteum HOM05D006900 ORTHO05D008651 1.4e-37 162.5 473 74.6
Peaxi162Scf00681g00223 Petunia axillaris HOM05D006900 ORTHO05D008651 6.9e-37 160.2 176 48.3
CSS0034541 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 1.2e-36 159.5 117 62.4
Sopen04g004200 Solanum pennellii HOM05D006900 ORTHO05D008651 2.0e-36 158.7 215 41.9
Nitab4.5_0004979g0030 Nicotiana tabacum HOM05D006900 ORTHO05D008651 2.6e-36 158.3 114 64.9
Nitab4.5_0010299g0060 Nicotiana tabacum HOM05D006900 ORTHO05D008651 2.6e-36 158.3 114 64.9
Actinidia13360 Actinidia chinensis HOM05D006900 ORTHO05D008651 3.4e-36 157.9 509 69.4
ECA233G1261 Erigeron canadensis HOM05D006900 ORTHO05D008651 3.4e-36 157.9 128 60.2
BcaB06g25797 Brassica carinata HOM05D006900 ORTHO05D008651 4.5e-36 157.5 110 65.5
BcaC05g28835 Brassica carinata HOM05D006900 ORTHO05D008651 4.5e-36 157.5 110 65.5
BolC5t33686H Brassica oleracea HOM05D006900 ORTHO05D008651 4.5e-36 157.5 110 65.5
BraA05t22092Z Brassica rapa HOM05D006900 ORTHO05D008651 4.5e-36 157.5 110 65.5
Manes.03G204600 Manihot esculenta HOM05D006900 ORTHO05D008651 4.5e-36 157.5 118 61.9
A05p32690 Brassica napus HOM05D006900 ORTHO05D008651 5.9e-36 157.1 110 65.5
C05p49400 Brassica napus HOM05D006900 ORTHO05D008651 5.9e-36 157.1 110 65.5
Eucgr.H04042 Eucalyptus grandis HOM05D006900 ORTHO05D008651 5.9e-36 157.1 168 49.4
Thhalv10020271m.g Eutrema salsugineum HOM05D006900 ORTHO05D008651 5.9e-36 157.1 110 65.5
HanXRQChr13g0393421 Helianthus annuus HOM05D006900 ORTHO05D008651 5.9e-36 157.1 116 63.8
AL3G30020 Arabidopsis lyrata HOM05D006900 ORTHO05D008651 7.7e-36 156.8 110 63.6
Carub.0003s1679 Capsella rubella HOM05D006900 ORTHO05D008651 1.0e-35 156.4 110 64.5
Lsat_1_v5_gn_6_18120 Lactuca sativa HOM05D006900 ORTHO05D008651 1.0e-35 156.4 116 63.8
Solyc04g009020.4 Solanum lycopersicum HOM05D006900 ORTHO05D008651 1.0e-35 156.4 230 40.4
CAN.G274.12 Capsicum annuum HOM05D006900 ORTHO05D008651 1.3e-35 156.0 110 66.4
SalBow8G4068 Salvia bowleyana HOM05D006900 ORTHO05D008651 1.3e-35 156.0 122 60.7
PGSC0003DMG400011531 Solanum tuberosum HOM05D006900 ORTHO05D008651 1.3e-35 156.0 230 40.0
PGR004G2297 Punica granatum HOM05D006900 ORTHO05D008651 2.2e-35 155.2 110 64.5
Thecc.04G300100 Theobroma cacao HOM05D006900 ORTHO05D008651 2.2e-35 155.2 113 63.7
Sp3g15260 Schrenkiella parvula HOM05D006900 ORTHO05D008651 3.8e-35 154.5 110 63.6
GSVIVG01034997001 Vitis vinifera HOM05D006900 ORTHO05D008651 3.8e-35 154.5 110 64.5
Aa31LG8G4070 Aethionema arabicum HOM05D006900 ORTHO05D008651 5.0e-35 154.1 110 64.5
Rhsim02G0004000 Rhododendron simsii HOM05D006900 ORTHO05D008651 5.0e-35 154.1 110 64.5
AagrBONN_evm.TU.Sc2ySwM_368.516 Anthoceros agrestis HOM05D006900 ORTHO05D008651 6.5e-35 153.7 112 65.2
CARHR092290 Cardamine hirsuta HOM05D006900 ORTHO05D008651 6.5e-35 153.7 110 64.5
AT3G17040 Arabidopsis thaliana HOM05D006900 ORTHO05D008651 8.5e-35 153.3 110 62.7
arahy.Tifrunner.gnm1.ann1.Z0RY6M Arachis hypogaea HOM05D006900 ORTHO05D008651 8.5e-35 153.3 110 65.5
TWI09G0824 Tripterygium wilfordii HOM05D006900 ORTHO05D008651 8.5e-35 153.3 110 65.5
MD13G1154800 Malus domestica HOM05D006900 ORTHO05D008651 1.1e-34 152.9 122 60.7
Potri.010G145000 Populus trichocarpa HOM05D006900 ORTHO05D008651 1.1e-34 152.9 110 62.7
RcHm_v2.0_Chr4g0425111 Rosa chinensis HOM05D006900 ORTHO05D008651 1.1e-34 152.9 110 64.5
Sabra10G0112000 Salix brachista HOM05D006900 ORTHO05D008651 1.1e-34 152.9 110 62.7
Duzib212G0988 Durio zibethinus HOM05D006900 ORTHO05D008651 1.4e-34 152.5 110 64.5
Lj6A690T75 Lonicera japonica HOM05D006900 ORTHO05D008651 1.4e-34 152.5 116 60.3
arahy.Tifrunner.gnm1.ann1.88EKIY Arachis hypogaea HOM05D006900 ORTHO05D008651 1.9e-34 152.1 110 64.5
Ca_21442_v3 Cicer arietinum L. HOM05D006900 ORTHO05D008651 1.9e-34 152.1 110 63.6
Lj4g0008712 Lotus japonicus HOM05D006900 ORTHO05D008651 1.9e-34 152.1 110 63.6
DCAR_030472 Daucus carota HOM05D006900 ORTHO05D008651 2.5e-34 151.8 110 63.6
Os03g0308800 Oryza sativa ssp. japonica HOM05D006900 ORTHO05D008651 2.5e-34 151.8 123 58.5
TPR.G16830 Trifolium pratense HOM05D006900 ORTHO05D008651 2.5e-34 151.8 110 62.7
Cfa015319 Carpinus fangiana HOM05D006900 ORTHO05D008651 3.2e-34 151.4 110 61.8
Cc03_g00870 Coffea canephora HOM05D006900 ORTHO05D008651 3.2e-34 151.4 114 62.3
MELO3C006715.2 Cucumis melo HOM05D006900 ORTHO05D008651 3.2e-34 151.4 110 64.5
CsaV3_3G015170 Cucumis sativus L. HOM05D006900 ORTHO05D008651 3.2e-34 151.4 110 64.5
Gohir.A10G171600 Gossypium hirsutum HOM05D006900 ORTHO05D008651 3.2e-34 151.4 110 64.5
Sc15g0003210 Simmondsia chinensis HOM05D006900 ORTHO05D008651 3.2e-34 151.4 132 56.1
MSTRG.10150 Avicennia marina HOM05D006900 ORTHO05D008651 4.2e-34 151.0 114 60.5
ClCG05G006560 Citrullus lanatus HOM05D006900 ORTHO05D008651 4.2e-34 151.0 110 64.5
FAN07G1219 Fragaria x ananassa HOM05D006900 ORTHO05D008651 4.2e-34 151.0 119 61.3
Gorai.011G199800 Gossypium raimondii HOM05D006900 ORTHO05D008651 4.2e-34 151.0 110 64.5
Psat0s740g0280 Pisum sativum HOM05D006900 ORTHO05D008651 4.2e-34 151.0 110 61.8
SMO115G0152 Selaginella moellendorffii HOM05D006900 ORTHO05D008651 4.2e-34 151.0 110 67.3
FvH4_4g19660 Fragaria vesca HOM05D006900 ORTHO05D008651 5.5e-34 150.6 119 61.3
FAN12G3178 Fragaria x ananassa HOM05D006900 ORTHO05D008651 5.5e-34 150.6 119 61.3
Gohir.D10G178700 Gossypium hirsutum HOM05D006900 ORTHO05D008651 5.5e-34 150.6 110 64.5
SGA_v2.0_scaffold104G30080 Striga asiatica HOM05D006900 ORTHO05D008651 5.5e-34 150.6 211 42.7
THA.LOC104820304 Tarenaya hassleriana HOM05D006900 ORTHO05D008651 5.5e-34 150.6 110 62.7
VMungo1215G0487 Vigna mungo HOM05D006900 ORTHO05D008651 5.5e-34 150.6 111 64.0
COL.COLO4_34620 Corchorus olitorius HOM05D006900 ORTHO05D008651 7.2e-34 150.2 239 40.6
PSO170G0176 Papaver somniferum HOM05D006900 ORTHO05D008651 7.2e-34 150.2 117 61.5
CDE01G0483 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 9.4e-34 149.8 110 61.8
Migut.G00056 Erythranthe guttata HOM05D006900 ORTHO05D008651 9.4e-34 149.8 116 60.3
Phvul.003G114100 Phaseolus vulgaris HOM05D006900 ORTHO05D008651 9.4e-34 149.8 121 61.2
QL06p012004 Quercus lobata HOM05D006900 ORTHO05D008651 9.4e-34 149.8 110 62.7
TAR362G0296 Trochodendron aralioides HOM05D006900 ORTHO05D008651 9.4e-34 149.8 110 64.5
Haze_01304 Corylus avellana HOM05D006900 ORTHO05D008651 1.2e-33 149.4 165 46.7
Hma1.2p1_0013F.1_g008570 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 1.2e-33 149.4 110 63.6
Hma1.2p1_0013F.1_g008580 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 1.2e-33 149.4 110 63.6
Prupe.1G117800 Prunus persica HOM05D006900 ORTHO05D008651 1.2e-33 149.4 110 62.7
Dinv15174 Davidia involucrata HOM05D006900 ORTHO05D008651 1.6e-33 149.1 110 62.7
PSO357G0537 Papaver somniferum HOM05D006900 ORTHO05D008651 1.6e-33 149.1 110 64.5
Sed0008833 Sechium edule HOM05D006900 ORTHO05D008651 1.6e-33 149.1 110 65.5
Medtr4g122060 Medicago truncatula HOM05D006900 ORTHO05D008651 2.1e-33 148.7 161 44.1
Nn3g21725 Nelumbo nucifera HOM05D006900 ORTHO05D008651 2.1e-33 148.7 110 62.7
Ciclev10004521m.g Citrus clementina HOM05D006900 ORTHO05D008651 2.7e-33 148.3 149 53.7
Glyma.07G240000 Glycine max HOM05D006900 ORTHO05D008651 2.7e-33 148.3 111 63.1
Ah.04g156910 Amaranthus hybridus HOM05D006900 ORTHO05D008651 3.6e-33 147.9 110 61.8
ATR0693G010 Amborella trichopoda HOM05D006900 ORTHO05D008651 3.6e-33 147.9 190 44.7
CANSAT64G2951 Cannabis sativa HOM05D006900 ORTHO05D008651 3.6e-33 147.9 113 59.3
AUR62016204 Chenopodium quinoa HOM05D006900 ORTHO05D008651 3.6e-33 147.9 110 63.6
AUR62039284 Chenopodium quinoa HOM05D006900 ORTHO05D008651 3.6e-33 147.9 110 63.6
Glyma.17G033400 Glycine max HOM05D006900 ORTHO05D008651 3.6e-33 147.9 111 63.1
Lalb_Chr07g0182071 Lupinus albus HOM05D006900 ORTHO05D008651 3.6e-33 147.9 110 61.8
Zm00001eb014810 Zea mays HOM05D006900 ORTHO05D008651 3.6e-33 147.9 118 59.3
Atru.chr4.3007 Acer truncatum HOM05D006900 ORTHO05D008651 4.6e-33 147.5 114 60.5
CiPaw.02G075100 Carya illinoinensis HOM05D006900 ORTHO05D008651 3.0e-32 144.8 110 60.0
unitig_748.g8700 Utricularia gibba HOM05D006900 ORTHO05D008651 6.7e-32 143.7 110 58.2
Aqoxy5G02843 Aquilegia oxysepala HOM05D006900 ORTHO05D008651 1.5e-31 142.5 110 59.1
CBR_g12177 Chara braunii HOM05D006900 ORTHO05D008651 1.5e-31 142.5 360 33.3
vmacro15184 Vaccinium macrocarpon HOM05D006900 ORTHO05D008651 2.5e-31 141.7 132 53.0
EL10Ac3g05503 Beta vulgaris HOM05D006900 ORTHO05D008651 3.3e-31 141.4 110 60.0
MBI18_g32026_MAGBIO Magnolia biondii HOM05D006900 ORTHO05D008651 4.3e-31 141.0 110 58.2
CDE12G0762 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 5.7e-31 140.6 111 60.4
Hund03124 Selenicereus undatus HOM05D006900 ORTHO05D008651 1.8e-29 135.6 137 51.1
CANSAT78G0722 Cannabis sativa HOM05D006900 ORTHO05D008651 6.5e-27 127.1 102 54.9
CSS0028196 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 2.8e-22 111.7 83 62.7
CSS0035140 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 3.1e-21 108.2 83 60.2
Cre09.g416200 Chlamydomonas reinhardtii HOM05D006900 ORTHO05D008651 5.5e-18 97.4 160 40.0
MCO01G208 Micromonas commoda HOM05D006900 ORTHO05D008651 1.8e-16 92.4 186 33.9
PRCOL_00006040 Prasinoderma coloniale HOM05D001216 ORTHO05D005688 6.3e-14 84.0 110 40.9
Gohir.A10G171950 Gossypium hirsutum HOM05D006900 ORTHO05D008651 3.6e-09 68.2 52 59.6
Cpa.g.sc9.62 Carica papaya HOM05D006900 ORTHO05D008651 6.1e-09 67.4 139 30.2
Gohir.A10G171900 Gossypium hirsutum HOM05D006900 ORTHO05D008651 3.3e-07 61.6 113 34.5


User provided reference genes

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