Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0063s0053 Marchantia polymorpha HOM05D000780 ORTHO05D008187 9.5e-104 380.2 192 100.0
Pp3c22_21010 Physcomitrium patens HOM05D000780 ORTHO05D008187 2.8e-71 272.3 191 71.2
SMO172G0199 Selaginella moellendorffii HOM05D000780 ORTHO05D008187 8.2e-71 270.8 188 72.9
SEGI_35156 Sequoiadendron giganteum HOM05D000780 ORTHO05D008187 2.0e-69 266.2 192 67.7
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 3.9e-65 251.9 192 67.7
Nitab4.5_0003148g0010 Nicotiana tabacum HOM05D000780 ORTHO05D008187 8.7e-65 250.8 188 68.6
Thecc.05G266200 Theobroma cacao HOM05D000780 ORTHO05D008187 1.1e-64 250.4 192 67.2
Cc09_g03050 Coffea canephora HOM05D000780 ORTHO05D008187 1.5e-64 250.0 188 68.6
Nitab4.5_0000841g0110 Nicotiana tabacum HOM05D000780 ORTHO05D008187 4.3e-64 248.4 188 68.1
TAR365G0867 Trochodendron aralioides HOM05D000780 ORTHO05D008187 4.3e-64 248.4 185 68.6
vmacro19977 Vaccinium macrocarpon HOM05D000780 ORTHO05D008187 5.7e-64 248.1 188 68.6
Potri.013G050400 Populus trichocarpa HOM05D000780 ORTHO05D008187 2.2e-63 246.1 192 66.1
Prupe.6G352700 Prunus persica HOM05D000780 ORTHO05D008187 2.8e-63 245.7 189 66.1
Eucgr.B02158 Eucalyptus grandis HOM05D000780 ORTHO05D008187 3.7e-63 245.4 190 66.8
Peaxi162Scf00077g00146 Petunia axillaris HOM05D000780 ORTHO05D008187 3.7e-63 245.4 192 66.7
Solyc04g050480.4 Solanum lycopersicum HOM05D000780 ORTHO05D008187 3.7e-63 245.4 188 68.1
Lj5g0021253 Lotus japonicus HOM05D000780 ORTHO05D008187 4.8e-63 245.0 188 66.5
Sopen04g021260 Solanum pennellii HOM05D000780 ORTHO05D008187 4.8e-63 245.0 188 67.6
Gohir.D13G172100 Gossypium hirsutum HOM05D000780 ORTHO05D008187 6.3e-63 244.6 191 65.4
Hma1.2p1_0123F.1_g058210 Hydrangea macrophylla HOM05D000780 ORTHO05D008187 6.3e-63 244.6 190 66.8
PGSC0003DMG400028708 Solanum tuberosum HOM05D000780 ORTHO05D008187 6.3e-63 244.6 188 67.6
Gohir.A13G161900 Gossypium hirsutum HOM05D000780 ORTHO05D008187 8.2e-63 244.2 191 65.4
MSTRG.9218 Avicennia marina HOM05D000780 ORTHO05D008187 1.1e-62 243.8 185 68.1
GSVIVG01026325001 Vitis vinifera HOM05D000780 ORTHO05D008187 1.1e-62 243.8 190 66.3
CSS0012715 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D008187 2.4e-62 242.7 191 63.9
CSS0043062 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D008187 2.4e-62 242.7 191 63.9
CiPaw.07G077300 Carya illinoinensis HOM05D000780 ORTHO05D008187 3.1e-62 242.3 188 65.4
Actinidia06829 Actinidia chinensis HOM05D000780 ORTHO05D008187 4.1e-62 241.9 185 66.5
Ciclev10022342m.g Citrus clementina HOM05D000780 ORTHO05D008187 4.1e-62 241.9 185 67.6
Nn1g03034 Nelumbo nucifera HOM05D000780 ORTHO05D008187 4.1e-62 241.9 191 66.5
MELO3C026663.2 Cucumis melo HOM05D000780 ORTHO05D008187 5.3e-62 241.5 186 64.0
SalBow1G0848 Salvia bowleyana HOM05D000780 ORTHO05D008187 5.3e-62 241.5 185 67.6
THA.LOC104821579 Tarenaya hassleriana HOM05D000780 ORTHO05D008187 5.3e-62 241.5 188 66.0
Migut.F02051 Erythranthe guttata HOM05D000780 ORTHO05D008187 9.0e-62 240.7 190 65.3
Sp5g21080 Schrenkiella parvula HOM05D000780 ORTHO05D008187 9.0e-62 240.7 186 64.5
Glyma.10G167500 Glycine max HOM05D000780 ORTHO05D008187 1.2e-61 240.4 184 67.4
Sed0008093 Sechium edule HOM05D000780 ORTHO05D008187 1.2e-61 240.4 183 65.6
Atru.chr2.1118 Acer truncatum HOM05D000780 ORTHO05D008187 1.5e-61 240.0 188 65.4
PGR142G2101 Punica granatum HOM05D000780 ORTHO05D008187 1.5e-61 240.0 188 65.4
Cfa006318 Carpinus fangiana HOM05D000780 ORTHO05D008187 2.6e-61 239.2 186 66.1
arahy.Tifrunner.gnm1.ann1.22BZB2 Arachis hypogaea HOM05D000780 ORTHO05D008187 3.4e-61 238.8 185 66.5
CAN.G1311.4 Capsicum annuum HOM05D000780 ORTHO05D008187 4.5e-61 238.4 192 64.6
CsaV3_3G029860 Cucumis sativus L. HOM05D000780 ORTHO05D008187 4.5e-61 238.4 186 64.0
BcaB01g01289 Brassica carinata HOM05D000780 ORTHO05D008187 5.9e-61 238.0 183 65.6
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 5.9e-61 238.0 197 63.5
arahy.Tifrunner.gnm1.ann1.A1PM7K Arachis hypogaea HOM05D000780 ORTHO05D008187 7.6e-61 237.7 185 66.5
Lsat_1_v5_gn_9_45901 Lactuca sativa HOM05D000780 ORTHO05D008187 7.6e-61 237.7 193 63.7
Lalb_Chr06g0168371 Lupinus albus HOM05D000780 ORTHO05D008187 7.6e-61 237.7 185 66.5
ECA232G3805 Erigeron canadensis HOM05D000780 ORTHO05D008187 1.7e-60 236.5 189 64.0
TPR.G10275 Trifolium pratense HOM05D000780 ORTHO05D008187 1.7e-60 236.5 185 65.4
HanXRQChr15g0491391 Helianthus annuus HOM05D000780 ORTHO05D008187 2.2e-60 236.1 188 64.4
MD12G1250600 Malus domestica HOM05D000780 ORTHO05D008187 2.2e-60 236.1 190 65.3
BcaC08g46086 Brassica carinata HOM05D000780 ORTHO05D008187 3.8e-60 235.3 186 63.4
FvH4_6g01510 Fragaria vesca HOM05D000780 ORTHO05D008187 5.0e-60 235.0 189 64.0
VMungo0720G3181 Vigna mungo HOM05D000780 ORTHO05D008187 5.0e-60 235.0 184 65.8
C06p39320 Brassica napus HOM05D000780 ORTHO05D008187 6.5e-60 234.6 186 62.9
BolC6t39025H Brassica oleracea HOM05D000780 ORTHO05D008187 6.5e-60 234.6 186 62.9
Manes.08G142200 Manihot esculenta HOM05D000780 ORTHO05D008187 6.5e-60 234.6 192 63.5
FAN05G1554 Fragaria x ananassa HOM05D003786 ORTHO05D008187 1.1e-59 233.8 188 63.8
FAN05G3511 Fragaria x ananassa HOM05D003786 ORTHO05D008187 1.1e-59 233.8 188 63.8
Carub.0007s3696 Capsella rubella HOM05D000780 ORTHO05D008187 1.4e-59 233.4 186 62.4
Aa31LG2G2020 Aethionema arabicum HOM05D000780 ORTHO05D008187 1.9e-59 233.0 183 65.6
AL7G51540 Arabidopsis lyrata HOM05D000780 ORTHO05D008187 1.9e-59 233.0 186 62.9
Phvul.L001832 Phaseolus vulgaris HOM05D000780 ORTHO05D008187 1.9e-59 233.0 184 65.2
FAN14G4371 Fragaria x ananassa HOM05D003786 ORTHO05D008187 2.5e-59 232.6 188 63.3
CANSAT54G1591 Cannabis sativa HOM05D000780 ORTHO05D008187 3.2e-59 232.3 184 65.8
Aqoxy5G00096 Aquilegia oxysepala HOM05D000780 ORTHO05D008187 5.5e-59 231.5 185 62.2
CDE08G0869 Ceratophyllum demersum HOM05D000780 ORTHO05D008187 7.2e-59 231.1 185 63.2
RcHm_v2.0_Chr3g0449181 Rosa chinensis HOM05D000780 ORTHO05D008187 7.2e-59 231.1 188 63.3
HPP92_012831 Vanilla planifolia HOM05D000780 ORTHO05D008187 7.2e-59 231.1 184 64.7
A07p33060 Brassica napus HOM05D000780 ORTHO05D008187 9.4e-59 230.7 186 62.4
BraA07t30934Z Brassica rapa HOM05D000780 ORTHO05D008187 9.4e-59 230.7 186 62.4
Hund21757 Selenicereus undatus HOM05D000780 ORTHO05D008187 1.2e-58 230.3 190 64.7
Thhalv10019185m.g Eutrema salsugineum HOM05D000780 ORTHO05D008187 2.7e-58 229.2 183 62.8
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 3.6e-58 228.8 180 64.4
Medtr1g079767 Medicago truncatula HOM05D000780 ORTHO05D008187 4.6e-58 228.4 185 62.2
AUR62006990 Chenopodium quinoa HOM05D000780 ORTHO05D008187 6.1e-58 228.0 188 61.7
Lj2A46T71 Lonicera japonica HOM05D000780 ORTHO05D008187 7.9e-58 227.6 186 65.1
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 1.0e-57 227.3 188 61.7
Gorai.013G188600 Gossypium raimondii HOM05D000780 ORTHO05D008187 1.4e-57 226.9 218 57.3
EL10Ac4g09772 Beta vulgaris HOM05D000780 ORTHO05D008187 1.8e-57 226.5 192 60.9
PSO832G2551 Papaver somniferum HOM05D000780 ORTHO05D008187 1.8e-57 226.5 188 60.6
AT5G38890 Arabidopsis thaliana HOM05D000780 ORTHO05D008187 2.3e-57 226.1 183 61.7
CARHR263660 Cardamine hirsuta HOM05D000780 ORTHO05D008187 3.9e-57 225.3 186 61.3
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 2.5e-56 222.6 177 65.0
Sc08g0004580 Simmondsia chinensis HOM05D000780 ORTHO05D008187 1.7e-55 219.9 198 60.1
Os02g0815800 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D008187 1.8e-54 216.5 186 61.8
PSO674G0050 Papaver somniferum HOM05D000780 ORTHO05D008187 1.8e-54 216.5 188 59.6
QL01p042023 Quercus lobata HOM05D000780 ORTHO05D008187 6.9e-54 214.5 242 51.7
QL03p032337 Quercus lobata HOM05D000780 ORTHO05D008187 6.9e-54 214.5 242 51.7
BcaB03g15301 Brassica carinata HOM05D000780 ORTHO05D008187 7.9e-50 201.1 159 62.9
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 2.3e-49 199.5 164 62.8
CDE07G0101 Ceratophyllum demersum HOM05D000780 ORTHO05D008187 2.4e-46 189.5 147 63.9
SalBow1G5753 Salvia bowleyana HOM05D000780 ORTHO05D008187 3.4e-45 185.7 158 63.9
MCO11G401 Micromonas commoda HOM05D000780 ORTHO05D008187 3.8e-44 182.2 195 53.8
Cre07.g312750 Chlamydomonas reinhardtii HOM05D000780 ORTHO05D008187 1.1e-43 180.6 182 56.6
SalBow1G8050 Salvia bowleyana HOM05D000780 ORTHO05D008187 2.5e-43 179.5 185 54.6
DCAR_005521 Daucus carota HOM05D000780 ORTHO05D008187 3.2e-43 179.1 108 76.9
SGA_v2.0_scaffold62G21470 Striga asiatica HOM05D000780 ORTHO05D008187 1.2e-42 177.2 185 54.1
SEGI_30710 Sequoiadendron giganteum HOM05D000780 ORTHO05D008187 2.7e-42 176.0 114 76.3
FAN14G4130 Fragaria x ananassa HOM05D003786 ORTHO05D004375 8.0e-42 174.5 188 55.9
AagrBONN_evm.TU.Sc2ySwM_228.3966 Anthoceros agrestis HOM05D000780 ORTHO05D008187 3.9e-41 172.2 131 66.4
ATR0724G057 Amborella trichopoda HOM05D000780 ORTHO05D008187 5.2e-41 171.8 107 79.4
Ah.06g187920 Amaranthus hybridus HOM05D000780 ORTHO05D008187 7.4e-40 167.9 250 42.8
Glyma.20G221600 Glycine max HOM05D000780 ORTHO05D008187 1.1e-38 164.1 122 68.0
Dinv06003 Davidia involucrata HOM05D000780 ORTHO05D008187 2.4e-38 162.9 135 63.7
Psat6g127280 Pisum sativum HOM05D000780 ORTHO05D008187 1.6e-37 160.2 138 60.1
TWI60G0996 Tripterygium wilfordii HOM05D000780 ORTHO05D008187 4.7e-34 148.7 128 60.9
Zm00001eb258800 Zea mays HOM05D000780 ORTHO05D008187 8.0e-34 147.9 133 57.1
QL01p042037 Quercus lobata HOM05D000780 ORTHO05D008187 3.3e-32 142.5 84 82.1
Thecc.07G153800 Theobroma cacao HOM05D000780 ORTHO05D008187 3.3e-32 142.5 102 69.6
Cfa025943 Carpinus fangiana HOM05D000780 ORTHO05D008187 7.2e-27 124.8 192 39.6
PRCOL_00002874 Prasinoderma coloniale HOM05D000780 ORTHO05D008187 7.5e-24 114.8 127 50.4
ClCG03G011510 Citrullus lanatus HOM05D000780 ORTHO05D008187 2.4e-22 109.8 104 51.0
Dinv18279 Davidia involucrata HOM05D000780 ORTHO05D008187 5.4e-22 108.6 113 49.6
MD04G1233000 Malus domestica HOM05D000780 ORTHO05D008187 3.5e-21 105.9 137 49.6
Haze_04451 Corylus avellana HOM05D000780 ORTHO05D008187 2.3e-20 103.2 137 48.2
Dinv06000 Davidia involucrata HOM05D000780 ORTHO05D008187 1.8e-17 93.6 59 76.3
SalBow1G3250 Salvia bowleyana HOM05D000780 ORTHO05D008187 3.1e-09 66.2 73 50.7
SalBow1G1556 Salvia bowleyana HOM05D000111 ORTHO05D013786 8.3e-07 58.2 110 33.6
SalBow1G5540 Salvia bowleyana HOM05D000780 ORTHO05D008187 1.4e-06 57.4 73 46.6


User provided reference genes

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