Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0043s0044 Marchantia polymorpha HOM05D005539 ORTHO05D006644 0.0e+00 1661.7 856 100.0
AagrBONN_evm.TU.Sc2ySwM_362.2924 Anthoceros agrestis HOM05D005539 ORTHO05D006644 4.9e-192 675.6 819 47.3
Pp3c6_24520 Physcomitrium patens HOM05D005539 ORTHO05D006644 2.4e-186 656.8 762 47.8
ATR0193G007 Amborella trichopoda HOM05D005539 ORTHO05D006644 1.4e-141 508.1 729 40.9
TAR369G0030 Trochodendron aralioides HOM05D005539 ORTHO05D006644 6.9e-138 495.7 817 36.6
Nn2g13702 Nelumbo nucifera HOM05D005539 ORTHO05D006644 3.4e-137 493.4 784 38.3
COL.COLO4_25704 Corchorus olitorius HOM05D005539 ORTHO05D006644 8.5e-136 488.8 790 37.0
Glyma.11G229000 Glycine max HOM05D005539 ORTHO05D006644 4.2e-135 486.5 808 37.0
Gohir.D10G247700 Gossypium hirsutum HOM05D005539 ORTHO05D006644 7.2e-135 485.7 779 37.1
CANSAT56G2522 Cannabis sativa HOM05D005539 ORTHO05D006644 1.2e-134 485.0 773 39.2
CiPaw.01G297900 Carya illinoinensis HOM05D005539 ORTHO05D006644 1.6e-134 484.6 790 37.3
Gorai.011G286200 Gossypium raimondii HOM05D005539 ORTHO05D006644 2.7e-134 483.8 779 37.0
Aqoxy4G02586 Aquilegia oxysepala HOM05D005539 ORTHO05D006644 1.0e-133 481.9 781 37.8
arahy.Tifrunner.gnm1.ann1.W7ADHZ Arachis hypogaea HOM05D005539 ORTHO05D006644 1.4e-133 481.5 780 37.4
Eucgr.J00217 Eucalyptus grandis HOM05D005539 ORTHO05D006644 1.4e-133 481.5 771 37.4
Lalb_Chr15g0084151 Lupinus albus HOM05D005539 ORTHO05D006644 1.8e-133 481.1 776 37.8
Ca_15119_v3 Cicer arietinum L. HOM05D005539 ORTHO05D006644 2.3e-133 480.7 791 37.3
VMungo1383G3500 Vigna mungo HOM05D005539 ORTHO05D006644 2.3e-133 480.7 814 36.5
Duzib106G1755 Durio zibethinus HOM05D005539 ORTHO05D006644 3.0e-133 480.3 782 36.2
Thecc.10G020000 Theobroma cacao HOM05D005539 ORTHO05D006644 3.0e-133 480.3 782 37.1
Gohir.A10G235300 Gossypium hirsutum HOM05D005539 ORTHO05D006644 5.2e-133 479.6 779 36.8
Potri.010G189700 Populus trichocarpa HOM05D005539 ORTHO05D006644 5.2e-133 479.6 773 37.8
Atru.chr12.24 Acer truncatum HOM05D005539 ORTHO05D006644 6.7e-133 479.2 813 36.3
Medtr3g070390 Medicago truncatula HOM05D005539 ORTHO05D006644 6.7e-133 479.2 807 36.6
Phvul.001G242300 Phaseolus vulgaris HOM05D005539 ORTHO05D006644 6.7e-133 479.2 814 36.5
GSVIVG01032835001 Vitis vinifera HOM05D005539 ORTHO05D006644 8.8e-133 478.8 814 36.5
Hma1.2p1_0703F.1_g206530 Hydrangea macrophylla HOM05D005539 ORTHO05D006644 2.0e-132 477.6 789 38.0
Potri.008G067600 Populus trichocarpa HOM05D005539 ORTHO05D006644 2.6e-132 477.2 816 36.6
PGR044G2440 Punica granatum HOM05D005539 ORTHO05D006644 7.4e-132 475.7 770 38.2
Manes.10G013600 Manihot esculenta HOM05D005539 ORTHO05D006644 9.7e-132 475.3 797 37.3
PSO339G2908 Papaver somniferum HOM05D005539 ORTHO05D006644 1.3e-131 474.9 780 37.7
Psat5g128120 Pisum sativum HOM05D005539 ORTHO05D006644 2.2e-131 474.2 777 37.2
THA.LOC104826852 Tarenaya hassleriana HOM05D005539 ORTHO05D006644 3.7e-131 473.4 832 36.4
arahy.Tifrunner.gnm1.ann1.4ME2IF Arachis hypogaea HOM05D005539 ORTHO05D006644 4.8e-131 473.0 780 37.1
CsaV3_5G010080 Cucumis sativus L. HOM05D005539 ORTHO05D006644 4.8e-131 473.0 779 36.7
Sed0009998 Sechium edule HOM05D005539 ORTHO05D006644 1.4e-130 471.5 779 37.6
EL10Ac2g04818 Beta vulgaris HOM05D005539 ORTHO05D006644 4.1e-130 469.9 783 37.4
HanXRQChr14g0459831 Helianthus annuus HOM05D005539 ORTHO05D006644 4.1e-130 469.9 776 37.9
Lsat_1_v5_gn_2_122921 Lactuca sativa HOM05D005539 ORTHO05D006644 7.0e-130 469.2 822 36.7
PSO384G3240 Papaver somniferum HOM05D005539 ORTHO05D006644 9.1e-130 468.8 831 36.1
Cc02_g06620 Coffea canephora HOM05D005539 ORTHO05D006644 1.2e-129 468.4 807 36.3
Prupe.2G249200 Prunus persica HOM05D005539 ORTHO05D006644 2.0e-129 467.6 776 37.4
Cpa.g.sc19.181 Carica papaya HOM05D005539 ORTHO05D006644 2.6e-129 467.2 783 36.9
Migut.F01380 Erythranthe guttata HOM05D005539 ORTHO05D006644 2.6e-129 467.2 781 37.0
Hund15944 Selenicereus undatus HOM05D005539 ORTHO05D006644 7.7e-129 465.7 789 36.6
MD01G1152200 Malus domestica HOM05D005539 ORTHO05D006644 1.0e-128 465.3 780 37.1
Sabra10G0146300 Salix brachista HOM05D005539 ORTHO05D006644 1.0e-128 465.3 796 36.3
MSTRG.8325 Avicennia marina HOM05D005539 ORTHO05D006644 1.3e-128 464.9 780 35.9
MELO3C025184.2 Cucumis melo HOM05D005539 ORTHO05D006644 1.3e-128 464.9 781 36.9
Rhsim09G0176800 Rhododendron simsii HOM05D005539 ORTHO05D006644 5.0e-128 463.0 785 36.9
Actinidia29697 Actinidia chinensis HOM05D005539 ORTHO05D006644 1.9e-127 461.1 739 37.5
Carub.0006s0457 Capsella rubella HOM05D005539 ORTHO05D006644 1.6e-126 458.0 786 37.3
ECA238G2434 Erigeron canadensis HOM05D005539 ORTHO05D006644 1.6e-126 458.0 775 37.4
Oeu064386.1 Olea europaea HOM05D005539 ORTHO05D006644 1.6e-126 458.0 797 36.4
Ciclev10030725m.g Citrus clementina HOM05D005539 ORTHO05D006644 2.1e-126 457.6 785 36.6
FvH4_7g24380 Fragaria vesca HOM05D005539 ORTHO05D006644 6.1e-126 456.1 778 37.0
AUR62022871 Chenopodium quinoa HOM05D005539 ORTHO05D006644 1.0e-125 455.3 831 35.3
Lj6g0015972 Lotus japonicus HOM05D005539 ORTHO05D006644 1.0e-125 455.3 778 36.0
RcHm_v2.0_Chr1g0370081 Rosa chinensis HOM05D005539 ORTHO05D006644 1.8e-125 454.5 775 37.0
AUR62012239 Chenopodium quinoa HOM05D005539 ORTHO05D006644 2.3e-125 454.1 823 35.4
AL6G15570 Arabidopsis lyrata HOM05D005539 ORTHO05D006644 4.0e-125 453.4 839 36.7
Lj8A68G37 Lonicera japonica HOM05D005539 ORTHO05D006644 5.2e-125 453.0 783 36.1
FAN01G2659 Fragaria x ananassa HOM05D005539 ORTHO05D006644 6.7e-125 452.6 778 37.0
FAN10G0075 Fragaria x ananassa HOM05D005539 ORTHO05D006644 8.8e-125 452.2 778 37.0
CAN.G1694.1 Capsicum annuum HOM05D005539 ORTHO05D006644 2.0e-124 451.1 797 34.9
DCAR_011807 Daucus carota HOM05D005539 ORTHO05D006644 1.3e-123 448.4 777 35.1
FAN03G1336 Fragaria x ananassa HOM05D005539 ORTHO05D006644 2.8e-123 447.2 777 36.7
AT5G05680 Arabidopsis thaliana HOM05D005539 ORTHO05D006644 4.8e-123 446.4 778 37.4
A10p30680 Brassica napus HOM05D005539 ORTHO05D006644 1.1e-122 445.3 783 37.4
vmacro10050 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 7.0e-122 442.6 824 35.7
Sopen11g010350 Solanum pennellii HOM05D005539 ORTHO05D006644 4.5e-121 439.9 783 34.7
Sp6g37210 Schrenkiella parvula HOM05D005539 ORTHO05D006644 3.8e-120 436.8 830 34.7
Peaxi162Scf00825g00123 Petunia axillaris HOM05D005539 ORTHO05D006644 5.0e-120 436.4 786 34.7
C09p71160 Brassica napus HOM05D005539 ORTHO05D006644 1.5e-119 434.9 784 37.0
Sc14g0005370 Simmondsia chinensis HOM05D005539 ORTHO05D006644 3.2e-119 433.7 760 35.8
CARHR207600 Cardamine hirsuta HOM05D005539 ORTHO05D006644 1.4e-117 428.3 834 34.4
BolC9t59878H Brassica oleracea HOM05D005539 ORTHO05D006644 1.8e-117 427.9 810 36.3
Aa31LG11G6690 Aethionema arabicum HOM05D005539 ORTHO05D006644 6.8e-117 426.0 821 33.9
ClCG07G004120 Citrullus lanatus HOM05D005539 ORTHO05D006644 2.0e-116 424.5 807 33.8
FAN06G4384 Fragaria x ananassa HOM05D005539 ORTHO05D006644 2.8e-115 420.6 777 35.5
Thhalv10012715m.g Eutrema salsugineum HOM05D005539 ORTHO05D006644 4.8e-115 419.9 828 34.2
Dinv17988 Davidia involucrata HOM05D005539 ORTHO05D006644 2.0e-113 414.5 711 37.4
SGA_v2.0_scaffold76G25107 Striga asiatica HOM05D005539 ORTHO05D006644 1.3e-112 411.8 699 35.6
Os04g0608400 Oryza sativa ssp. japonica HOM05D005539 ORTHO05D006644 2.3e-112 411.0 778 34.6
Actinidia33928 Actinidia chinensis HOM05D005539 ORTHO05D006644 5.5e-111 406.4 787 34.7
Zm00001eb430560 Zea mays HOM05D005539 ORTHO05D006644 5.5e-111 406.4 729 35.8
vmacro10051 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 7.2e-111 406.0 785 34.8
BcaB05g21701 Brassica carinata HOM05D005539 ORTHO05D006644 2.1e-110 404.4 827 34.2
HPP92_019887 Vanilla planifolia HOM05D005539 ORTHO05D006644 3.6e-110 403.7 821 33.6
Haze_17219 Corylus avellana HOM05D005539 ORTHO05D006644 5.2e-109 399.8 693 36.2
Sc14g0005420 Simmondsia chinensis HOM05D005539 ORTHO05D006644 4.9e-107 393.3 747 34.3
CBR_g22013 Chara braunii HOM05D005539 ORTHO05D006644 2.4e-106 391.0 879 32.2
TPR.G2533 Trifolium pratense HOM05D005539 ORTHO05D006644 7.0e-106 389.4 633 38.1
Ah.04g164520 Amaranthus hybridus HOM05D005539 ORTHO05D006644 8.6e-104 382.5 780 33.2
FAN06G2075 Fragaria x ananassa HOM05D005539 ORTHO05D006644 1.8e-101 374.8 635 37.6
FAN10G4325 Fragaria x ananassa HOM05D005539 ORTHO05D006644 1.8e-101 374.8 635 37.6
SEGI_35888 Sequoiadendron giganteum HOM05D005539 ORTHO05D006644 6.8e-101 372.9 457 44.2
Cfa001325 Carpinus fangiana HOM05D005539 ORTHO05D006644 2.9e-99 367.5 623 36.6
BcaC06g32273 Brassica carinata HOM05D005539 ORTHO05D006644 8.3e-99 365.9 784 33.5
BcaC06g32275 Brassica carinata HOM05D005539 ORTHO05D006644 7.0e-98 362.8 637 38.3
FAN06G5029 Fragaria x ananassa HOM05D005539 ORTHO05D006644 9.2e-98 362.5 636 37.4
CSS0043358 Camellia sinensis var. sinensis HOM05D005539 ORTHO05D006644 7.8e-97 359.4 788 34.1
Hma1.2p1_0703F.1_g206540 Hydrangea macrophylla HOM05D005539 ORTHO05D006644 1.9e-95 354.8 608 38.5
unitig_0.g238 Utricularia gibba HOM05D005539 ORTHO05D006644 2.0e-84 318.2 809 29.2
CDE04G1676 Ceratophyllum demersum HOM05D005539 ORTHO05D006644 1.7e-80 305.1 575 33.9
BraA10t45109Z Brassica rapa HOM05D005539 ORTHO05D006644 1.1e-71 275.8 551 36.1
SHI03446 Sapria himalayana HOM05D005539 ORTHO05D006644 9.6e-71 272.7 488 35.7
Dinv17987 Davidia involucrata HOM05D005539 ORTHO05D006644 5.4e-66 256.9 363 40.2
SEGI_33727 Sequoiadendron giganteum HOM05D005539 ORTHO05D006644 1.6e-65 255.4 385 40.3
SEGI_27471 Sequoiadendron giganteum HOM05D005539 ORTHO05D006644 2.3e-64 251.5 314 45.2
Solyc11g020190.1 Solanum lycopersicum HOM05D005539 ORTHO05D006644 5.3e-61 240.4 465 32.5
QL08p063092 Quercus lobata HOM05D005539 ORTHO05D006644 8.1e-54 216.5 324 39.5
Nitab4.5_0001171g0020 Nicotiana tabacum HOM05D005539 ORTHO05D006644 2.9e-51 208.0 290 41.4
Nitab4.5_0003886g0070 Nicotiana tabacum HOM05D005539 ORTHO05D006644 2.9e-51 208.0 331 38.7
Dinv17986 Davidia involucrata HOM05D005539 ORTHO05D006644 8.4e-51 206.5 383 36.6
Solyc11g008120.3 Solanum lycopersicum HOM05D005539 ORTHO05D006644 9.6e-47 193.0 395 31.9
Glyma.18G028233 Glycine max HOM05D005539 ORTHO05D006644 2.8e-38 164.9 251 39.4
Solyc11g008110.1 Solanum lycopersicum HOM05D005539 ORTHO05D006644 1.2e-36 159.5 194 44.8
HanXRQChr13g0392111 Helianthus annuus HOM05D005539 ORTHO05D006644 2.2e-35 155.2 286 36.0
SEGI_03850 Sequoiadendron giganteum HOM05D005539 ORTHO05D006644 3.8e-35 154.5 224 39.3
Glyma.18G028167 Glycine max HOM05D005539 ORTHO05D006644 4.2e-34 151.0 204 38.7
CDE04G3215 Ceratophyllum demersum HOM05D005539 ORTHO05D006644 3.2e-26 124.8 234 35.9
Nitab4.5_0000395g0010 Nicotiana tabacum HOM05D005539 ORTHO05D006644 5.7e-23 114.0 308 31.8
Solyc11g020180.3 Solanum lycopersicum HOM05D005539 ORTHO05D006644 9.7e-23 113.2 149 41.6
MCO09G726 Micromonas commoda HOM05D005539 ORTHO05D006644 3.7e-22 111.3 674 22.1
vmacro22159 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 1.3e-19 102.8 362 30.7
HPP92_019878 Vanilla planifolia HOM05D005539 ORTHO05D006644 3.2e-18 98.2 218 30.7
MD07G1220900 Malus domestica HOM05D005539 ORTHO05D006644 1.7e-14 85.9 173 34.7
FAN06G2580 Fragaria x ananassa HOM05D005539 ORTHO05D006644 8.2e-14 83.6 142 33.8
Cre06.g278900 Chlamydomonas reinhardtii HOM05D005539 ORTHO05D006644 5.3e-13 80.9 314 26.4


User provided reference genes

Program Settings