Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0008s0219 Marchantia polymorpha HOM05D006408 ORTHO05D008038 9.4e-195 683.3 342 100.0
Pp3c1_1000 Physcomitrium patens HOM05D006408 ORTHO05D008038 2.5e-94 349.7 273 64.5
ATR0568G086 Amborella trichopoda HOM05D006408 ORTHO05D008038 1.1e-78 297.7 274 56.2
TAR628G0457 Trochodendron aralioides HOM05D006408 ORTHO05D008038 9.4e-78 294.7 286 51.7
Cfa018129 Carpinus fangiana HOM05D006408 ORTHO05D008038 8.0e-77 291.6 263 55.1
CANSAT25G1301 Cannabis sativa HOM05D006408 ORTHO05D008038 3.9e-76 289.3 284 51.1
CiPaw.16G022700 Carya illinoinensis HOM05D006408 ORTHO05D008038 5.2e-76 288.9 276 52.5
THA.LOC104814021 Tarenaya hassleriana HOM05D006408 ORTHO05D008038 5.2e-76 288.9 266 53.8
Gorai.005G087700 Gossypium raimondii HOM05D006408 ORTHO05D008038 3.3e-75 286.2 266 53.8
Lalb_Chr08g0241101 Lupinus albus HOM05D006408 ORTHO05D008038 9.7e-75 284.6 274 52.6
Thecc.08G133100 Theobroma cacao HOM05D006408 ORTHO05D008038 9.7e-75 284.6 276 52.5
CDE06G0572 Ceratophyllum demersum HOM05D006408 ORTHO05D008038 1.3e-74 284.3 295 51.9
QL09p032485 Quercus lobata HOM05D006408 ORTHO05D008038 1.3e-74 284.3 219 60.7
PSO017G3385 Papaver somniferum HOM05D006408 ORTHO05D008038 1.7e-74 283.9 302 48.7
Peaxi162Scf00066g00222 Petunia axillaris HOM05D006408 ORTHO05D008038 1.7e-74 283.9 250 53.2
Sp1g19130 Schrenkiella parvula HOM05D006408 ORTHO05D008038 2.2e-74 283.5 328 47.3
MBI03_g48069_MAGBIO Magnolia biondii HOM05D006408 ORTHO05D008038 2.8e-74 283.1 302 50.0
CsaV3_4G028270 Cucumis sativus L. HOM05D006408 ORTHO05D008038 3.7e-74 282.7 268 52.6
Aqoxy5G02393 Aquilegia oxysepala HOM05D006408 ORTHO05D008038 6.3e-74 282.0 286 50.7
CSS0036755 Camellia sinensis var. sinensis HOM05D006408 ORTHO05D008038 6.3e-74 282.0 251 55.0
PSO170G2303 Papaver somniferum HOM05D006408 ORTHO05D008038 6.3e-74 282.0 310 47.7
CAN.G288.5 Capsicum annuum HOM05D006408 ORTHO05D008038 8.2e-74 281.6 264 52.3
Gohir.D02G078200 Gossypium hirsutum HOM05D006408 ORTHO05D008038 8.2e-74 281.6 220 60.5
AL1G34740 Arabidopsis lyrata HOM05D006408 ORTHO05D008038 1.1e-73 281.2 324 47.5
DCAR_003587 Daucus carota HOM05D006408 ORTHO05D008038 1.1e-73 281.2 253 53.4
Ca_16607_v3 Cicer arietinum L. HOM05D006408 ORTHO05D008038 1.4e-73 280.8 279 51.6
Actinidia15213 Actinidia chinensis HOM05D006408 ORTHO05D008038 2.4e-73 280.0 278 52.2
Lj4A682G50 Lonicera japonica HOM05D006408 ORTHO05D008038 2.4e-73 280.0 245 55.5
Nitab4.5_0001168g0170 Nicotiana tabacum HOM05D006408 ORTHO05D008038 2.4e-73 280.0 285 48.8
ClCG11G015980 Citrullus lanatus HOM05D006408 ORTHO05D008038 3.1e-73 279.6 349 44.7
Manes.02G168400 Manihot esculenta HOM05D006408 ORTHO05D008038 3.1e-73 279.6 269 51.7
unitig_52.g17545 Utricularia gibba HOM05D006408 ORTHO05D008038 3.1e-73 279.6 250 54.4
Cpa.g.sc26.317 Carica papaya HOM05D006408 ORTHO05D008038 5.3e-73 278.9 277 50.9
MELO3C010512.2 Cucumis melo HOM05D006408 ORTHO05D008038 7.0e-73 278.5 351 45.0
Phvul.009G129900 Phaseolus vulgaris HOM05D006408 ORTHO05D008038 9.1e-73 278.1 274 51.5
Medtr3g088605 Medicago truncatula HOM05D006408 ORTHO05D008038 1.2e-72 277.7 278 52.5
Nn1g08961 Nelumbo nucifera HOM05D006408 ORTHO05D008038 1.2e-72 277.7 277 53.4
PGR083G0137 Punica granatum HOM05D006408 ORTHO05D008038 1.6e-72 277.3 260 53.8
Solyc04g057870.3 Solanum lycopersicum HOM05D006408 ORTHO05D008038 1.6e-72 277.3 288 49.3
CARHR021960 Cardamine hirsuta HOM05D006408 ORTHO05D008038 3.5e-72 276.2 325 46.5
Potri.002G078900 Populus trichocarpa HOM05D006408 ORTHO05D008038 3.5e-72 276.2 281 49.8
Cc10_g13760 Coffea canephora HOM05D006408 ORTHO05D008038 5.9e-72 275.4 252 52.4
Sopen04g025710 Solanum pennellii HOM05D006408 ORTHO05D008038 5.9e-72 275.4 288 49.0
Glyma.06G117500 Glycine max HOM05D006408 ORTHO05D008038 7.7e-72 275.0 279 51.3
Psat5g084760 Pisum sativum HOM05D006408 ORTHO05D008038 7.7e-72 275.0 296 49.0
PGSC0003DMG400028061 Solanum tuberosum HOM05D006408 ORTHO05D008038 7.7e-72 275.0 256 52.3
AT1G21600 Arabidopsis thaliana HOM05D006408 ORTHO05D008038 1.0e-71 274.6 324 46.6
A06p17690 Brassica napus HOM05D006408 ORTHO05D008038 1.0e-71 274.6 320 47.8
BraA06t24861Z Brassica rapa HOM05D006408 ORTHO05D008038 1.0e-71 274.6 320 47.8
VMungo1309G0712 Vigna mungo HOM05D006408 ORTHO05D008038 1.0e-71 274.6 274 51.5
EL10Ac1g01346 Beta vulgaris HOM05D006408 ORTHO05D008038 1.3e-71 274.2 283 50.2
Carub.0001s2103 Capsella rubella HOM05D006408 ORTHO05D008038 1.3e-71 274.2 220 59.5
Prupe.1G489500 Prunus persica HOM05D006408 ORTHO05D008038 1.7e-71 273.9 266 50.4
FAN27G1901 Fragaria x ananassa HOM05D006408 ORTHO05D008038 2.2e-71 273.5 255 52.2
C05p20590 Brassica napus HOM05D006408 ORTHO05D008038 2.9e-71 273.1 316 47.5
BolC5t30757H Brassica oleracea HOM05D006408 ORTHO05D008038 2.9e-71 273.1 316 47.5
Glyma.04G087000 Glycine max HOM05D006408 ORTHO05D008038 2.9e-71 273.1 280 50.4
HanXRQChr02g0045521 Helianthus annuus HOM05D006408 ORTHO05D008038 2.9e-71 273.1 255 53.7
Sed0021255 Sechium edule HOM05D006408 ORTHO05D008038 2.9e-71 273.1 251 52.6
GSVIVG01008807001 Vitis vinifera HOM05D006408 ORTHO05D008038 2.9e-71 273.1 220 59.1
FAN24G2159 Fragaria x ananassa HOM05D006408 ORTHO05D008038 3.8e-71 272.7 253 52.6
FAN15G0171 Fragaria x ananassa HOM05D006408 ORTHO05D008038 5.0e-71 272.3 253 52.2
BcaB07g32155 Brassica carinata HOM05D006408 ORTHO05D008038 6.5e-71 271.9 220 59.5
Oeu047179.2 Olea europaea HOM05D006408 ORTHO05D008038 6.5e-71 271.9 228 56.6
Atru.chr13.1568 Acer truncatum HOM05D006408 ORTHO05D008038 1.9e-70 270.4 262 52.7
MSTRG.22398 Avicennia marina HOM05D006408 ORTHO05D008038 1.9e-70 270.4 219 58.9
CDE04G0676 Ceratophyllum demersum HOM05D006408 ORTHO05D008038 3.2e-70 269.6 285 51.6
FAN20G2488 Fragaria x ananassa HOM05D006408 ORTHO05D008038 3.2e-70 269.6 280 48.6
Hma1.2p1_1121F.1_g259280 Hydrangea macrophylla HOM05D006408 ORTHO05D008038 4.2e-70 269.2 245 52.7
FvH4_2g27850 Fragaria vesca HOM05D006408 ORTHO05D008038 5.5e-70 268.9 220 57.3
Lj1g0002290 Lotus japonicus HOM05D006408 ORTHO05D008038 5.5e-70 268.9 220 60.5
Aa31LG7G5580 Aethionema arabicum HOM05D006408 ORTHO05D008038 7.2e-70 268.5 296 48.3
BcaC05g26077 Brassica carinata HOM05D006408 ORTHO05D008038 7.2e-70 268.5 316 46.8
MD08G1159400 Malus domestica HOM05D006408 ORTHO05D008038 7.2e-70 268.5 267 49.4
Ciclev10001886m.g Citrus clementina HOM05D006408 ORTHO05D008038 1.6e-69 267.3 247 54.3
RcHm_v2.0_Chr6g0296711 Rosa chinensis HOM05D006408 ORTHO05D008038 1.6e-69 267.3 266 49.6
ECA236G3303 Erigeron canadensis HOM05D006408 ORTHO05D008038 2.1e-69 266.9 244 53.7
SEGI_15088 Sequoiadendron giganteum HOM05D006408 ORTHO05D008038 3.6e-69 266.2 246 54.1
arahy.Tifrunner.gnm1.ann1.227FW7 Arachis hypogaea HOM05D006408 ORTHO05D008038 4.7e-69 265.8 273 50.9
arahy.Tifrunner.gnm1.ann1.8X384Y Arachis hypogaea HOM05D006408 ORTHO05D008038 4.7e-69 265.8 291 49.5
TPR.G28811 Trifolium pratense HOM05D006408 ORTHO05D008038 6.1e-69 265.4 276 51.8
HPP92_009911 Vanilla planifolia HOM05D006408 ORTHO05D008038 6.1e-69 265.4 269 50.9
Migut.N03260 Erythranthe guttata HOM05D006408 ORTHO05D008038 1.8e-68 263.8 219 57.1
Eucgr.A00239 Eucalyptus grandis HOM05D006408 ORTHO05D008038 5.7e-67 258.8 327 45.3
Lsat_1_v5_gn_1_7780 Lactuca sativa HOM05D006408 ORTHO05D008038 6.3e-66 255.4 238 52.5
SMO146G0302 Selaginella moellendorffii HOM05D006408 ORTHO05D008038 2.4e-65 253.4 205 55.6
Zm00001eb195160 Zea mays HOM05D006408 ORTHO05D008038 4.1e-65 252.7 219 53.4
A08p28910 Brassica napus HOM05D006408 ORTHO05D008038 7.0e-65 251.9 205 59.5
Os12g0110400 Oryza sativa ssp. japonica HOM05D006408 ORTHO05D008038 7.0e-65 251.9 251 50.2
Os11g0110100 Oryza sativa ssp. japonica HOM05D006408 ORTHO05D008038 2.7e-64 250.0 251 50.2
Hund17341 Selenicereus undatus HOM05D006408 ORTHO05D008038 2.2e-63 246.9 243 53.9
Gohir.A02G071000 Gossypium hirsutum HOM05D006408 ORTHO05D008038 9.8e-59 231.5 220 52.3
Ah.10g032560 Amaranthus hybridus HOM05D006408 ORTHO05D008038 3.7e-58 229.6 296 44.9
BolC8t49731H Brassica oleracea HOM05D006408 ORTHO05D008038 2.9e-55 219.9 340 39.4
SGA_v2.0_scaffold25G11139 Striga asiatica HOM05D006408 ORTHO05D008038 3.0e-52 209.9 351 39.0
Thhalv10007813m.g Eutrema salsugineum HOM05D006408 ORTHO05D008038 2.6e-51 206.8 236 48.7
Rhsim06G0091400 Rhododendron simsii HOM05D006408 ORTHO05D008038 5.7e-51 205.7 403 33.7
vmacro20822 Vaccinium macrocarpon HOM05D006408 ORTHO05D008038 5.4e-49 199.1 167 55.1
C08p20930 Brassica napus HOM05D006408 ORTHO05D008038 9.2e-49 198.4 171 55.6
Nitab4.5_0003978g0010 Nicotiana tabacum HOM05D006408 ORTHO05D008038 2.7e-48 196.8 217 46.5
AUR62007717 Chenopodium quinoa HOM05D006408 ORTHO05D008038 2.3e-47 193.7 283 39.9
Sc26g0002930 Simmondsia chinensis HOM05D006408 ORTHO05D008038 2.3e-47 193.7 209 50.2
AUR62013426 Chenopodium quinoa HOM05D006408 ORTHO05D008038 5.0e-47 192.6 283 39.6
Duzib093G1884 Durio zibethinus HOM05D006408 ORTHO05D008038 3.7e-42 176.4 220 43.6
CBR_g40143 Chara braunii HOM05D006408 ORTHO05D008038 7.8e-40 168.7 359 33.1
BraA08t34821Z Brassica rapa HOM05D006408 ORTHO05D008038 2.8e-37 160.2 143 53.8
CsaV3_UNG224650 Cucumis sativus L. HOM05D006408 ORTHO05D008038 3.6e-37 159.8 215 43.3
COL.COLO4_06961 Corchorus olitorius HOM05D006408 ORTHO05D008038 1.2e-35 154.8 145 51.7
CsaV3_5G019980 Cucumis sativus L. HOM05D006408 ORTHO05D008038 9.8e-35 151.8 221 40.7
SalBow2G2951 Salvia bowleyana HOM05D006408 ORTHO05D008038 1.1e-33 148.3 111 59.5
MBI03_g28486_MAGBIO Magnolia biondii HOM05D006408 ORTHO05D008038 4.1e-33 146.4 244 38.9
AagrBONN_evm.TU.Sc2ySwM_344.4901 Anthoceros agrestis HOM05D006408 ORTHO05D008038 1.1e-30 138.3 129 58.9
Dinv14691 Davidia involucrata HOM05D006408 ORTHO05D008038 2.2e-26 124.0 119 52.9
MBI03_g39652_MAGBIO Magnolia biondii HOM05D006408 ORTHO05D008038 1.9e-25 120.9 109 55.0
Sabra02G0061800 Salix brachista HOM05D006408 ORTHO05D008038 3.5e-24 116.7 93 58.1
CsaV3_5G018920 Cucumis sativus L. HOM05D006408 ORTHO05D008038 4.7e-21 106.3 97 53.6
BolC5t30909H Brassica oleracea HOM05D006408 ORTHO05D008038 2.6e-19 100.5 64 71.9
Aqoxy219s001 Aquilegia oxysepala HOM05D006408 ORTHO05D008038 7.6e-19 99.0 109 45.9
Actinidia21278 Actinidia chinensis HOM05D006408 ORTHO05D008038 1.2e-08 65.1 104 37.5


User provided reference genes

Program Settings