Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0008s0083 Marchantia polymorpha HOM05D009278 ORTHO05D002685 1.2e-88 330.9 344 100.0
Lj2C426T10 Lonicera japonica HOM05D002943 ORTHO05D002685 1.5e-14 84.7 88 52.3
Zm00001eb270960 Zea mays HOM05D005612 ORTHO05D002685 9.6e-14 82.0 92 51.1
Zm00001eb276600 Zea mays HOM05D002943 ORTHO05D002685 1.6e-13 81.3 92 51.1
Os07g0572000 Oryza sativa ssp. japonica HOM05D002943 ORTHO05D002685 3.7e-13 80.1 87 49.4
CSS0032407 Camellia sinensis var. sinensis HOM05D002943 ORTHO05D002685 6.2e-13 79.3 88 47.7
Oeu054736.1 Olea europaea HOM05D002943 ORTHO05D002685 6.2e-13 79.3 88 48.9
Zm00001eb325000 Zea mays HOM05D002943 ORTHO05D002685 6.2e-13 79.3 87 49.4
Zm00001eb325010 Zea mays HOM05D002943 ORTHO05D002685 8.1e-13 79.0 87 48.3
QL06p037843 Quercus lobata HOM05D002943 ORTHO05D002685 1.1e-12 78.6 89 47.2
unitig_749.g13741 Utricularia gibba HOM05D003798 ORTHO05D004652 1.8e-12 77.8 92 44.6
AUR62006609 Chenopodium quinoa HOM05D002943 ORTHO05D002685 4.0e-12 76.6 89 46.1
ECA247G3845 Erigeron canadensis HOM05D002943 ORTHO05D002685 5.3e-12 76.3 91 46.2
Lsat_1_v5_gn_9_3501 Lactuca sativa HOM05D002943 ORTHO05D002685 6.9e-12 75.9 87 48.3
MSTRG.18239 Avicennia marina HOM05D002943 ORTHO05D002685 1.2e-11 75.1 87 43.7
Mapoly0035s0097 Marchantia polymorpha HOM05D002943 ORTHO05D002685 1.2e-11 75.1 66 56.1
Nn1g05606 Nelumbo nucifera HOM05D002943 ORTHO05D002685 1.2e-11 75.1 88 45.5
vmacro05467 Vaccinium macrocarpon HOM05D002943 ORTHO05D002685 1.2e-11 75.1 88 46.6
Ah.11g050560 Amaranthus hybridus HOM05D002943 ORTHO05D002685 2.0e-11 74.3 88 45.5
ATR0332G039 Amborella trichopoda HOM05D002943 ORTHO05D002685 2.0e-11 74.3 89 44.9
TWI59G0374 Tripterygium wilfordii HOM05D002943 ORTHO05D002685 2.0e-11 74.3 88 45.5
MBI04_g36449_MAGBIO Magnolia biondii HOM05D002943 ORTHO05D002685 2.6e-11 73.9 88 45.5
CDE05G3340 Ceratophyllum demersum HOM05D002943 ORTHO05D002685 3.4e-11 73.6 87 46.0
AagrBONN_evm.TU.Sc2ySwM_362.2759 Anthoceros agrestis HOM05D002943 ORTHO05D002685 5.8e-11 72.8 64 54.7
Hund02771 Selenicereus undatus HOM05D002943 ORTHO05D002685 5.8e-11 72.8 88 45.5
SGA_v2.0_scaffold1G00490 Striga asiatica HOM05D002943 ORTHO05D002685 5.8e-11 72.8 88 44.3
AL6G50270 Arabidopsis lyrata HOM05D002943 ORTHO05D002685 7.6e-11 72.4 87 43.7
AT4G02730 Arabidopsis thaliana HOM05D002943 ORTHO05D002685 1.0e-10 72.0 87 43.7
EL10Ac5g10558 Beta vulgaris HOM05D002943 ORTHO05D002685 1.0e-10 72.0 88 44.3
QL12p021366 Quercus lobata HOM05D002943 ORTHO05D002685 1.3e-10 71.6 88 44.3
arahy.Tifrunner.gnm1.ann1.NISQ8K Arachis hypogaea HOM05D002943 ORTHO05D002685 1.7e-10 71.2 88 42.0
CARHR251070 Cardamine hirsuta HOM05D002943 ORTHO05D002685 1.7e-10 71.2 87 43.7
Glyma.02G146800 Glycine max HOM05D002943 ORTHO05D002685 1.7e-10 71.2 87 43.7
Pp3c14_5700 Physcomitrium patens HOM05D009278 ORTHO05D002685 1.7e-10 71.2 59 55.9
Carub.0006s3437 Capsella rubella HOM05D002943 ORTHO05D002685 2.2e-10 70.9 88 43.2
Haze_27348 Corylus avellana HOM05D002943 ORTHO05D002685 2.2e-10 70.9 84 44.0
Medtr1g072140 Medicago truncatula HOM05D002943 ORTHO05D002685 2.2e-10 70.9 87 43.7
Pp3c2_20770 Physcomitrium patens HOM05D009278 ORTHO05D002685 2.2e-10 70.9 63 54.0
PGR044G0058 Punica granatum HOM05D002943 ORTHO05D002685 2.2e-10 70.9 88 45.5
SGA_v2.0_scaffold138G35332 Striga asiatica HOM05D002943 ORTHO05D002685 2.2e-10 70.9 88 42.0
GSVIVG01001162001 Vitis vinifera HOM05D002943 ORTHO05D002685 2.2e-10 70.9 87 44.8
Thhalv10028762m.g Eutrema salsugineum HOM05D002943 ORTHO05D002685 2.9e-10 70.5 87 43.7
Lj5g0020766 Lotus japonicus HOM05D002943 ORTHO05D002685 2.9e-10 70.5 130 33.1
Lj2A1170T16 Lonicera japonica HOM05D002943 ORTHO05D002685 3.8e-10 70.1 87 41.4
Psat6g060720 Pisum sativum HOM05D002943 ORTHO05D002685 3.8e-10 70.1 87 43.7
RcHm_v2.0_Chr6g0290821 Rosa chinensis HOM05D002943 ORTHO05D002685 3.8e-10 70.1 92 41.3
CANSAT56G2303 Cannabis sativa HOM05D002943 ORTHO05D002685 4.9e-10 69.7 87 42.5
Haze_04694 Corylus avellana HOM05D002943 ORTHO05D002685 4.9e-10 69.7 87 43.7
Sp6g02690 Schrenkiella parvula HOM05D002943 ORTHO05D002685 4.9e-10 69.7 87 42.5
Aqoxy2G03372 Aquilegia oxysepala HOM05D002943 ORTHO05D002685 8.4e-10 68.9 87 42.5
SalBow4G2517 Salvia bowleyana HOM05D002943 ORTHO05D002685 8.4e-10 68.9 88 46.6
BcaB05g23663 Brassica carinata HOM05D002943 ORTHO05D002685 1.1e-09 68.6 87 41.4
Dinv34766 Davidia involucrata HOM05D002943 ORTHO05D002685 1.1e-09 68.6 87 42.5
SHI25865 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-09 68.6 84 42.9
Cfa006157 Carpinus fangiana HOM05D002943 ORTHO05D002685 1.9e-09 67.8 87 42.5
vmacro02583 Vaccinium macrocarpon HOM05D002943 ORTHO05D002685 1.9e-09 67.8 87 42.5
AL6G50240 Arabidopsis lyrata HOM05D002943 ORTHO05D002685 2.5e-09 67.4 87 42.5
VMungo0720G0375 Vigna mungo HOM05D002943 ORTHO05D002685 2.5e-09 67.4 87 41.4
BcaC03g16173 Brassica carinata HOM05D002943 ORTHO05D002685 3.2e-09 67.0 87 41.4
A02p24970 Brassica napus HOM05D002943 ORTHO05D002685 3.2e-09 67.0 87 41.4
C02p39070 Brassica napus HOM05D002943 ORTHO05D002685 3.2e-09 67.0 87 41.4
BolC2t09917H Brassica oleracea HOM05D002943 ORTHO05D002685 3.2e-09 67.0 87 41.4
BraA02t07487Z Brassica rapa HOM05D002943 ORTHO05D002685 3.2e-09 67.0 87 41.4
ClCG09G007120 Citrullus lanatus HOM05D002943 ORTHO05D002685 3.2e-09 67.0 87 42.5
Eucgr.K03366 Eucalyptus grandis HOM05D002943 ORTHO05D002685 3.2e-09 67.0 87 42.5
Glyma.10G027100 Glycine max HOM05D002943 ORTHO05D002685 3.2e-09 67.0 87 42.5
CiPaw.07G090800 Carya illinoinensis HOM05D002943 ORTHO05D002685 4.2e-09 66.6 87 41.4
Ca_09752_v3 Cicer arietinum L. HOM05D002943 ORTHO05D002685 5.5e-09 66.2 87 40.2
Phvul.007G172600 Phaseolus vulgaris HOM05D002943 ORTHO05D002685 7.1e-09 65.9 87 41.4
DCAR_012486 Daucus carota HOM05D002943 ORTHO05D002685 9.3e-09 65.5 88 42.0
SMO119G0268 Selaginella moellendorffii HOM05D002943 ORTHO05D002685 9.3e-09 65.5 55 52.7
MELO3C015824.2 Cucumis melo HOM05D002943 ORTHO05D002685 1.2e-08 65.1 87 41.4
CsaV3_7G028040 Cucumis sativus L. HOM05D002943 ORTHO05D002685 1.2e-08 65.1 87 41.4
MD03G1263200 Malus domestica HOM05D002943 ORTHO05D002685 1.2e-08 65.1 87 43.7
Pp3c10_4790 Physcomitrium patens HOM05D009278 ORTHO05D002685 1.6e-08 64.7 49 57.1
AagrBONN_evm.TU.Sc2ySwM_253.1 Anthoceros agrestis HOM05D009278 ORTHO05D002685 2.7e-08 63.9 47 57.4
AagrBONN_evm.TU.Sc2ySwM_286.1 Anthoceros agrestis HOM05D009278 ORTHO05D002685 2.7e-08 63.9 47 57.4
AagrBONN_evm.TU.Sc2ySwM_292.1 Anthoceros agrestis HOM05D009278 ORTHO05D002685 2.7e-08 63.9 47 57.4
CBR_g36834 Chara braunii HOM05D009278 ORTHO05D002685 2.7e-08 63.9 50 58.0
Prupe.8G239500 Prunus persica HOM05D002943 ORTHO05D002685 2.7e-08 63.9 87 39.1
AagrBONN_evm.TU.Sc2ySwM_252.1 Anthoceros agrestis HOM05D009278 ORTHO05D002685 4.6e-08 63.2 47 57.4
AagrBONN_evm.TU.Sc2ySwM_252.3 Anthoceros agrestis HOM05D009278 ORTHO05D002685 4.6e-08 63.2 47 57.4
AagrBONN_evm.TU.Sc2ySwM_259.2 Anthoceros agrestis HOM05D009278 ORTHO05D002685 4.6e-08 63.2 47 57.4
AagrBONN_evm.TU.Sc2ySwM_260.1 Anthoceros agrestis HOM05D009278 ORTHO05D002685 4.6e-08 63.2 47 57.4
AagrBONN_evm.TU.Sc2ySwM_260.3 Anthoceros agrestis HOM05D009278 ORTHO05D002685 4.6e-08 63.2 47 57.4
AagrBONN_evm.TU.Sc2ySwM_261.1 Anthoceros agrestis HOM05D009278 ORTHO05D002685 4.6e-08 63.2 47 57.4
AagrBONN_evm.TU.Sc2ySwM_286.2 Anthoceros agrestis HOM05D009278 ORTHO05D002685 4.6e-08 63.2 47 57.4
AagrBONN_evm.TU.Sc2ySwM_287.1 Anthoceros agrestis HOM05D009278 ORTHO05D002685 4.6e-08 63.2 47 57.4
Cc03_g10690 Coffea canephora HOM05D002943 ORTHO05D002685 4.6e-08 63.2 88 42.0
Lsat_1_v5_gn_4_28161 Lactuca sativa HOM05D002943 ORTHO05D002685 6.0e-08 62.8 82 46.3
PRCOL_00005022 Prasinoderma coloniale HOM05D001610 ORTHO05D002685 1.0e-07 62.0 91 37.4
Sed0026548 Sechium edule HOM05D002943 ORTHO05D002685 1.0e-07 62.0 87 41.4
Nn1g05949 Nelumbo nucifera HOM05D002943 ORTHO05D002685 6.7e-07 59.3 50 56.0
AagrBONN_evm.TU.Sc2ySwM_295.9 Anthoceros agrestis HOM05D009278 ORTHO05D002685 1.1e-06 58.5 88 40.9
COL.COLO4_10588 Corchorus olitorius HOM05D004885 ORTHO05D006124 1.1e-06 58.5 61 41.0
Solyc02g091790.3 Solanum lycopersicum HOM05D002943 ORTHO05D002685 1.1e-06 58.5 51 52.9
Sopen02g036370 Solanum pennellii HOM05D002943 ORTHO05D002685 1.1e-06 58.5 51 52.9
PGSC0003DMG401030621 Solanum tuberosum HOM05D002943 ORTHO05D002685 1.1e-06 58.5 51 52.9
TAR628G0306 Trochodendron aralioides HOM05D002943 ORTHO05D002685 1.1e-06 58.5 56 48.2
SEGI_40787 Sequoiadendron giganteum HOM05D002943 ORTHO05D002685 1.5e-06 58.2 58 48.3
Nitab4.5_0000093g0160 Nicotiana tabacum HOM05D002943 ORTHO05D002685 1.9e-06 57.8 49 53.1
Peaxi162Scf00939g00121 Petunia axillaris HOM05D002943 ORTHO05D002685 1.9e-06 57.8 48 56.2
ClCG01G018070 Citrullus lanatus HOM05D002943 ORTHO05D002685 2.5e-06 57.4 57 50.9
Eucgr.H02400 Eucalyptus grandis HOM05D002943 ORTHO05D002685 2.5e-06 57.4 66 43.9
Lalb_Chr12g0203371 Lupinus albus HOM05D006430 ORTHO05D007585 2.5e-06 57.4 85 35.3
Nitab4.5_0000396g0220 Nicotiana tabacum HOM05D002943 ORTHO05D002685 2.5e-06 57.4 49 53.1
Sed0027180 Sechium edule HOM05D002943 ORTHO05D002685 2.5e-06 57.4 58 50.0
HPP92_020621 Vanilla planifolia HOM05D002943 ORTHO05D002685 2.5e-06 57.4 66 47.0
Sed0026374 Sechium edule HOM05D006430 ORTHO05D007585 3.3e-06 57.0 91 34.1
ATR0332G110 Amborella trichopoda HOM05D002943 ORTHO05D002685 4.3e-06 56.6 46 54.3
AagrBONN_evm.TU.Sc2ySwM_261.2 Anthoceros agrestis HOM05D009278 ORTHO05D002685 4.3e-06 56.6 88 39.8
AagrBONN_evm.TU.Sc2ySwM_292.2 Anthoceros agrestis HOM05D002943 ORTHO05D002685 4.3e-06 56.6 88 39.8
TAR376G1143 Trochodendron aralioides HOM05D002943 ORTHO05D002685 4.3e-06 56.6 51 51.0
AagrBONN_evm.TU.Sc2ySwM_253.2 Anthoceros agrestis HOM05D009278 ORTHO05D002685 5.7e-06 56.2 88 39.8
AagrBONN_evm.TU.Sc2ySwM_368.2446 Anthoceros agrestis HOM05D009278 ORTHO05D002685 5.7e-06 56.2 88 39.8
FvH4_1g18760 Fragaria vesca HOM05D002943 ORTHO05D002685 9.6e-06 55.5 48 58.3
FAN19G1191 Fragaria x ananassa HOM05D002943 ORTHO05D002685 9.6e-06 55.5 48 58.3


User provided reference genes

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