Gene: PGSC0003DMG401030621

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG401030621
  • Transcript Identifier PGSC0003DMT400078695
  • Gene Type Coding gene
  • Location ST4.03ch02 : 42122028-42127997 : positive

Gene Family Information

  • ID HOM05D002943
  • #Genes/#Species 234/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37424273
  • id PGSC0003DMG401030621.v4.03
  • uniprot M1D0K0

Descriptions

  • Description WD-repeat protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051568
IBA
GOA Databasehistone H3-K4 methylation
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT3G49660

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0042393
IBA
GOA Databasehistone binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048188
IBA
GOA DatabaseSet1C/COMPASS complex
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G49660

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR024977 Anaphase-promoting complex subunit 4, WD40 domain
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR001680 WD40 repeat
IPR020472 G-protein beta WD-40 repeat
IPR036322 WD40-repeat-containing domain superfamily
Mapman id Description
12.3.3.1.3 Chromatin organisation.post-translational histone modification.histone lysine methylation.COMPASS histone trimethylation complex.component WDR5