Gene: AT4G02730

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G02730
  • Transcript Identifier AT4G02730.1
  • Gene Type Coding gene
  • Location Chr4 : 1207759-1209066 : positive

Gene Family Information

  • ID HOM05D002943
  • #Genes/#Species 234/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G02730.1
  • symbol WDR5b
  • Alias AtWDR5b
  • full_name human WDR5 (WD40 repeat) homolog b
  • uniprot Q9SY00

Descriptions

  • Description Transducin/WD40 repeat-like superfamily protein
  • Computational description Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 105879 Blast hits to 41942 proteins in 964 species: Archae - 68; Bacteria - 10657; Metazoa - 43181; Fungi - 22509; Plants - 14298; Viruses - 12; Other Eukaryotes - 15154 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0080008
ISS
Gene OntologyCul4-RING E3 ubiquitin ligase complex1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001680 WD40 repeat
IPR020472 G-protein beta WD-40 repeat
IPR036322 WD40-repeat-containing domain superfamily
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
12.3.3.1.3 Chromatin organisation.post-translational histone modification.histone lysine methylation.COMPASS histone trimethylation complex.component WDR5