Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G160700 Manihot esculenta HOM05D005515 ORTHO05D006620 5.1e-41 171.0 112 100.0
Dinv25661 Davidia involucrata HOM05D005515 ORTHO05D006620 3.8e-36 154.8 112 81.2
Gohir.A07G228200 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.1e-35 153.3 112 89.3
Sc07g0003980 Simmondsia chinensis HOM05D005515 ORTHO05D006620 3.2e-35 151.8 112 84.8
Gorai.001G271200 Gossypium raimondii HOM05D005515 ORTHO05D006620 4.2e-35 151.4 112 88.4
Prupe.3G305900 Prunus persica HOM05D005515 ORTHO05D006620 4.2e-35 151.4 112 87.5
Gohir.D07G235400 Gossypium hirsutum HOM05D005515 ORTHO05D006620 5.5e-35 151.0 112 86.6
Haze_14873 Corylus avellana HOM05D005515 ORTHO05D006620 2.7e-34 148.7 112 73.2
Eucgr.I01648 Eucalyptus grandis HOM05D005515 ORTHO05D006620 2.7e-34 148.7 106 86.8
Gohir.A05G338800 Gossypium hirsutum HOM05D005515 ORTHO05D006620 6.1e-34 147.5 112 82.1
Potri.001G330400 Populus trichocarpa HOM05D005515 ORTHO05D006620 1.0e-33 146.7 113 79.6
Duzib147G1212 Durio zibethinus HOM05D005515 ORTHO05D006620 1.4e-33 146.4 112 86.6
Aqoxy5G03385 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 5.1e-33 144.4 112 83.0
CiPaw.04G036400 Carya illinoinensis HOM05D005515 ORTHO05D006620 5.1e-33 144.4 112 67.9
Ciclev10017250m.g Citrus clementina HOM05D005515 ORTHO05D006620 5.1e-33 144.4 112 83.9
Thecc.04G035700 Theobroma cacao HOM05D005515 ORTHO05D006620 5.1e-33 144.4 112 86.6
CANSAT11G1216 Cannabis sativa HOM05D005515 ORTHO05D006620 6.7e-33 144.1 112 77.7
GSVIVG01033096001 Vitis vinifera HOM05D005515 ORTHO05D006620 6.7e-33 144.1 112 83.9
MD09G1011100 Malus domestica HOM05D005515 ORTHO05D006620 8.8e-33 143.7 111 73.9
Gohir.D04G077100 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.5e-32 142.9 112 82.1
Potri.017G069200 Populus trichocarpa HOM05D005515 ORTHO05D006620 2.0e-32 142.5 116 82.8
Aqoxy7G00951 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 2.6e-32 142.1 111 82.9
HPP92_000347 Vanilla planifolia HOM05D005515 ORTHO05D006620 2.6e-32 142.1 111 80.2
Duzib264G0697 Durio zibethinus HOM05D005515 ORTHO05D006620 3.3e-32 141.7 112 84.8
Atru.chr6.2567 Acer truncatum HOM05D005515 ORTHO05D006620 7.4e-32 140.6 111 84.7
Aqoxy2G02223 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 7.4e-32 140.6 111 82.0
Rhsim10G0006500 Rhododendron simsii HOM05D005515 ORTHO05D006620 9.7e-32 140.2 109 80.7
Gorai.012G087000 Gossypium raimondii HOM05D005515 ORTHO05D006620 1.7e-31 139.4 111 81.1
Lj1g0017105 Lotus japonicus HOM05D005515 ORTHO05D006620 1.7e-31 139.4 110 80.9
Dinv10962 Davidia involucrata HOM05D000504 ORTHO05D006620 2.8e-31 138.7 110 83.6
CSS0007323 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 3.7e-31 138.3 110 67.3
Lalb_Chr22g0360381 Lupinus albus HOM05D005515 ORTHO05D006620 3.7e-31 138.3 110 80.0
FvH4_6g53480 Fragaria vesca HOM05D005515 ORTHO05D006620 4.8e-31 137.9 112 73.2
Phvul.001G093800 Phaseolus vulgaris HOM05D005515 ORTHO05D006620 8.2e-31 137.1 113 77.9
Glyma.16G056700 Glycine max HOM05D005515 ORTHO05D006620 1.1e-30 136.7 110 80.0
FAN09G0415 Fragaria x ananassa HOM05D005515 ORTHO05D006620 1.4e-30 136.3 111 78.4
FAN05G2195 Fragaria x ananassa HOM05D005515 ORTHO05D006620 1.8e-30 136.0 111 78.4
Duzib187G1157 Durio zibethinus HOM05D005515 ORTHO05D006620 2.4e-30 135.6 112 83.0
Glyma.19G091000 Glycine max HOM05D005515 ORTHO05D006620 2.4e-30 135.6 110 78.2
SEGI_35944 Sequoiadendron giganteum HOM05D005515 ORTHO05D006620 2.4e-30 135.6 112 78.6
Psat3g175680 Pisum sativum HOM05D005515 ORTHO05D006620 3.1e-30 135.2 112 59.8
TPR.G38294 Trifolium pratense HOM05D005515 ORTHO05D006620 3.1e-30 135.2 112 59.8
Nitab4.5_0003376g0030 Nicotiana tabacum HOM05D005515 ORTHO05D006620 4.1e-30 134.8 112 81.2
Nitab4.5_0008640g0020 Nicotiana tabacum HOM05D005515 ORTHO05D006620 4.1e-30 134.8 112 81.2
TAR622G0361 Trochodendron aralioides HOM05D005515 ORTHO05D006620 4.1e-30 134.8 112 79.5
TWI36G0725 Tripterygium wilfordii HOM05D005515 ORTHO05D006620 5.3e-30 134.4 114 78.9
Medtr7g033490 Medicago truncatula HOM05D005515 ORTHO05D006620 9.1e-30 133.7 111 61.3
Zm00001eb364510 Zea mays HOM05D005515 ORTHO05D006620 9.1e-30 133.7 111 59.5
Cc11_g16850 Coffea canephora HOM05D005515 ORTHO05D006620 1.2e-29 133.3 113 79.6
FAN02G1022 Fragaria x ananassa HOM05D005515 ORTHO05D006620 1.5e-29 132.9 112 74.1
TAR374G0204 Trochodendron aralioides HOM05D005515 ORTHO05D006620 2.0e-29 132.5 110 79.1
EL10Ac6g15358 Beta vulgaris HOM05D005515 ORTHO05D006620 3.4e-29 131.7 112 61.6
AUR62017824 Chenopodium quinoa HOM05D005515 ORTHO05D006620 3.4e-29 131.7 112 63.4
Lsat_1_v5_gn_8_147620 Lactuca sativa HOM05D005515 ORTHO05D006620 4.5e-29 131.3 113 77.0
Oeu041666.1 Olea europaea HOM05D005515 ORTHO05D006620 7.7e-29 130.6 112 75.0
Os01g0920200 Oryza sativa ssp. japonica HOM05D005515 ORTHO05D006620 1.0e-28 130.2 107 71.0
PSO063G5856 Papaver somniferum HOM05D005515 ORTHO05D006620 1.3e-28 129.8 112 76.8
PSO782G3173 Papaver somniferum HOM05D005515 ORTHO05D006620 1.3e-28 129.8 112 75.9
Peaxi162Scf00881g00228 Petunia axillaris HOM05D005515 ORTHO05D006620 1.3e-28 129.8 111 78.4
Atru.chr11.2315 Acer truncatum HOM05D005515 ORTHO05D006620 2.9e-28 128.6 112 78.6
Hund04339 Selenicereus undatus HOM05D005515 ORTHO05D006620 3.8e-28 128.3 112 74.1
Solyc02g068110.4 Solanum lycopersicum HOM05D005515 ORTHO05D006620 6.5e-28 127.5 112 76.8
Mapoly0005s0063 Marchantia polymorpha HOM05D005515 ORTHO05D006620 8.5e-28 127.1 112 74.1
arahy.Tifrunner.gnm1.ann1.W7YL8X Arachis hypogaea HOM05D005515 ORTHO05D006620 2.5e-27 125.6 114 76.3
arahy.Tifrunner.gnm1.ann1.Y4DWZG Arachis hypogaea HOM05D005515 ORTHO05D006620 2.5e-27 125.6 114 76.3
Pp3c4_1860 Physcomitrium patens HOM05D005515 ORTHO05D006620 2.5e-27 125.6 107 77.6
CsaV3_6G032220 Cucumis sativus L. HOM05D005515 ORTHO05D006620 3.2e-27 125.2 112 67.9
Actinidia05921 Actinidia chinensis HOM05D005515 ORTHO05D006620 5.5e-27 124.4 122 59.8
Zm00001eb143260 Zea mays HOM05D005515 ORTHO05D006620 5.5e-27 124.4 106 57.5
Pp3c12_14240 Physcomitrium patens HOM05D005515 ORTHO05D006620 7.2e-27 124.0 106 73.6
CAN.G1300.5 Capsicum annuum HOM05D005515 ORTHO05D006620 9.4e-27 123.6 111 76.6
Migut.K01462 Erythranthe guttata HOM05D005515 ORTHO05D006620 2.7e-26 122.1 110 73.6
Sed0013471 Sechium edule HOM05D005515 ORTHO05D006620 6.1e-26 120.9 111 55.9
ATR1098G146 Amborella trichopoda HOM05D005515 ORTHO05D006620 1.1e-24 116.7 123 68.3
MSTRG.15568 Avicennia marina HOM05D005515 ORTHO05D006620 2.0e-24 115.9 113 73.5
Manes.12G012000 Manihot esculenta HOM05D005515 ORTHO05D006620 4.4e-24 114.8 111 74.8
Pp3c8_2660 Physcomitrium patens HOM05D005515 ORTHO05D006620 4.4e-24 114.8 110 55.5
Duzib268G1731 Durio zibethinus HOM05D005515 ORTHO05D006620 2.8e-23 112.1 117 54.7
AL5G16230 Arabidopsis lyrata HOM05D005515 ORTHO05D006620 4.8e-23 111.3 115 69.6
PGR102G1194 Punica granatum HOM05D005515 ORTHO05D006620 4.8e-23 111.3 113 68.1
Nn3g16471 Nelumbo nucifera HOM05D005515 ORTHO05D006620 1.1e-22 110.2 88 88.6
THA.LOC104823981 Tarenaya hassleriana HOM05D005515 ORTHO05D006620 1.4e-22 109.8 113 69.0
CARHR148320 Cardamine hirsuta HOM05D005515 ORTHO05D006620 1.6e-21 106.3 115 60.0
Gohir.A05G310700 Gossypium hirsutum HOM05D005515 ORTHO05D006620 5.9e-21 104.4 92 60.9
Sabra16G0211700 Salix brachista HOM05D005515 ORTHO05D006620 7.7e-21 104.0 206 44.7
Cfa009365 Carpinus fangiana HOM05D000048 ORTHO05D000445 1.0e-20 103.6 110 69.1
MD00G1139400 Malus domestica HOM05D005515 ORTHO05D006620 1.7e-20 102.8 82 65.9
Gorai.009G332600 Gossypium raimondii HOM05D005515 ORTHO05D006620 2.2e-20 102.4 112 52.7
SMO367G0376 Selaginella moellendorffii HOM05D005515 ORTHO05D006620 2.2e-20 102.4 109 64.2
unitig_8.g2909 Utricularia gibba HOM05D005515 ORTHO05D006620 2.2e-20 102.4 109 68.8
Haze_12412 Corylus avellana HOM05D000048 ORTHO05D000445 3.8e-20 101.7 112 52.7
RcHm_v2.0_Chr2g0175521 Rosa chinensis HOM05D005515 ORTHO05D006620 4.2e-19 98.2 54 88.9
MSTRG.7999 Avicennia marina HOM05D005515 ORTHO05D006620 5.5e-19 97.8 110 63.6
Migut.K00729 Erythranthe guttata HOM05D005515 ORTHO05D006620 7.2e-19 97.4 107 46.7
FAN14G0031 Fragaria x ananassa HOM05D005515 ORTHO05D006620 7.2e-19 97.4 87 66.7
QL02p071462 Quercus lobata HOM05D005515 ORTHO05D006620 9.4e-19 97.1 53 88.7
vmacro05955 Vaccinium macrocarpon HOM05D005515 ORTHO05D006620 1.2e-18 96.7 52 90.4
CSS0037273 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 2.7e-18 95.5 52 92.3
Sabra17G0064300 Salix brachista HOM05D005515 ORTHO05D006620 3.6e-18 95.1 106 63.2
Carub.0005s0534 Capsella rubella HOM05D005515 ORTHO05D006620 8.0e-18 94.0 116 61.2
Cpa.g.sc43.50 Carica papaya HOM05D005515 ORTHO05D006620 1.8e-17 92.8 88 77.3
MELO3C011459.2 Cucumis melo HOM05D005515 ORTHO05D006620 2.3e-17 92.4 83 68.7
PGSC0003DMG401006926 Solanum tuberosum HOM05D005515 ORTHO05D006620 3.0e-17 92.0 86 74.4
Sopen02g017220 Solanum pennellii HOM05D005515 ORTHO05D006620 4.0e-17 91.7 54 81.5
Ciclev10033394m.g Citrus clementina HOM05D005515 ORTHO05D006620 5.2e-17 91.3 87 77.0
AT3G27100 Arabidopsis thaliana HOM05D005515 ORTHO05D006620 1.2e-16 90.1 116 62.9
Actinidia36201 Actinidia chinensis HOM05D005515 ORTHO05D006620 3.3e-16 88.6 84 67.9
VMungo1383G1573 Vigna mungo HOM05D005515 ORTHO05D006620 4.4e-16 88.2 51 84.3
HanXRQChr12g0385431 Helianthus annuus HOM05D005515 ORTHO05D006620 1.3e-15 86.7 54 74.1
SGA_v2.0_scaffold154G37170 Striga asiatica HOM05D005515 ORTHO05D006620 3.7e-15 85.1 101 70.3
A09p03280 Brassica napus HOM05D005515 ORTHO05D006620 6.3e-15 84.3 115 60.0
SalBow7G1491 Salvia bowleyana HOM05D005515 ORTHO05D006620 6.3e-15 84.3 113 48.7
BcaC04g23917 Brassica carinata HOM05D005515 ORTHO05D006620 1.1e-14 83.6 114 59.6
BolC9t53269H Brassica oleracea HOM05D005515 ORTHO05D006620 1.1e-14 83.6 114 59.6
CDE02G3365 Ceratophyllum demersum HOM05D005515 ORTHO05D006620 1.1e-14 83.6 83 74.7
AagrBONN_evm.TU.Sc2ySwM_117.47 Anthoceros agrestis HOM05D005515 ORTHO05D006620 1.4e-14 83.2 86 48.8
BolC7t44132H Brassica oleracea HOM05D005515 ORTHO05D006620 1.8e-14 82.8 108 53.7
Thhalv10005161m.g Eutrema salsugineum HOM05D005515 ORTHO05D006620 4.1e-14 81.6 113 57.5
Sp2g16230 Schrenkiella parvula HOM05D005515 ORTHO05D006620 9.1e-14 80.5 112 60.7
Ah.02g120510 Amaranthus hybridus HOM05D005515 ORTHO05D006620 3.5e-13 78.6 46 78.3
Aa31LG2G5500 Aethionema arabicum HOM05D005515 ORTHO05D006620 4.5e-13 78.2 117 55.6
SalBow2G3427 Salvia bowleyana HOM05D005515 ORTHO05D006620 2.9e-12 75.5 84 47.6
Gohir.D05G311500 Gossypium hirsutum HOM05D005515 ORTHO05D006620 4.2e-11 71.6 89 48.3
C09p03480 Brassica napus HOM05D005515 ORTHO05D006620 5.5e-11 71.2 52 61.5
BraA06t27074Z Brassica rapa HOM05D005515 ORTHO05D006620 2.1e-10 69.3 113 54.0
A06p41490 Brassica napus HOM05D005515 ORTHO05D006620 1.8e-09 66.2 118 51.7
C07p36160 Brassica napus HOM05D005515 ORTHO05D006620 4.0e-09 65.1 105 55.2
MCO13G114 Micromonas commoda HOM05D005515 ORTHO05D006620 4.0e-09 65.1 87 58.6
Actinidia30652 Actinidia chinensis HOM05D005515 ORTHO05D006620 7.5e-08 60.8 60 53.3
Nn4g22340 Nelumbo nucifera HOM05D001716 ORTHO05D004234 1.7e-07 59.7 63 79.4
Cre08.g370300 Chlamydomonas reinhardtii HOM05D005515 ORTHO05D006620 2.8e-07 58.9 94 33.0
BraA09t35966Z Brassica rapa HOM05D005515 ORTHO05D006620 3.7e-07 58.5 89 61.8
COL.COLO4_20393 Corchorus olitorius HOM05D005515 ORTHO05D006620 3.7e-07 58.5 57 54.4
BcaB04g19426 Brassica carinata HOM05D005515 ORTHO05D006620 8.3e-07 57.4 41 63.4
Oeu006531.1 Olea europaea HOM05D005515 ORTHO05D006620 1.4e-06 56.6 61 49.2


User provided reference genes

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