Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G064318 Manihot esculenta HOM05D004689 ORTHO05D006269 1.7e-115 419.9 224 100.0
MSTRG.19190 Avicennia marina HOM05D004689 ORTHO05D006269 6.7e-88 328.2 175 91.4
CSS0004382 Camellia sinensis var. sinensis HOM05D004689 ORTHO05D006269 1.5e-87 327.0 176 91.5
CSS0024828 Camellia sinensis var. sinensis HOM05D004689 ORTHO05D006269 1.5e-87 327.0 176 91.5
CANSAT80G2663 Cannabis sativa HOM05D004689 ORTHO05D006269 1.9e-87 326.6 176 92.0
RhsimUnG0004400 Rhododendron simsii HOM05D004689 ORTHO05D006269 1.9e-87 326.6 176 91.5
RhsimUnG0067800 Rhododendron simsii HOM05D004689 ORTHO05D006269 1.9e-87 326.6 176 91.5
arahy.Tifrunner.gnm1.ann1.0YCB9L Arachis hypogaea HOM05D004689 ORTHO05D006269 3.3e-87 325.9 192 90.1
arahy.Tifrunner.gnm1.ann1.98D3Z3 Arachis hypogaea HOM05D004689 ORTHO05D006269 3.3e-87 325.9 192 90.1
Cfa021476 Carpinus fangiana HOM05D004689 ORTHO05D006269 2.1e-86 323.2 176 89.2
CiPaw.10G001700 Carya illinoinensis HOM05D004689 ORTHO05D006269 2.8e-86 322.8 192 89.6
AUR62026953 Chenopodium quinoa HOM05D004689 ORTHO05D006269 2.8e-86 322.8 175 90.3
EL10Ac7g16690 Beta vulgaris HOM05D004689 ORTHO05D006269 4.8e-86 322.0 175 90.3
TAR369G0565 Trochodendron aralioides HOM05D004689 ORTHO05D006269 6.2e-86 321.6 192 85.9
VMungo0917G0001 Vigna mungo HOM05D004689 ORTHO05D006269 8.1e-86 321.2 176 89.8
FAN02G2373 Fragaria x ananassa HOM05D004689 ORTHO05D006269 1.1e-85 320.9 176 89.2
FAN09G4523 Fragaria x ananassa HOM05D004689 ORTHO05D006269 1.1e-85 320.9 176 89.2
FAN14G4883 Fragaria x ananassa HOM05D004689 ORTHO05D006269 1.1e-85 320.9 176 89.2
QL03p020097 Quercus lobata HOM05D004689 ORTHO05D006269 1.4e-85 320.5 192 89.1
GSVIVG01033687001 Vitis vinifera HOM05D004689 ORTHO05D006269 2.4e-85 319.7 173 91.9
Ah.15g091430 Amaranthus hybridus HOM05D004689 ORTHO05D006269 3.1e-85 319.3 175 90.3
Phvul.005G180000 Phaseolus vulgaris HOM05D004689 ORTHO05D006269 3.1e-85 319.3 176 88.6
Actinidia32476 Actinidia chinensis HOM05D004689 ORTHO05D006269 4.0e-85 318.9 176 90.3
Nn6g35217 Nelumbo nucifera HOM05D004689 ORTHO05D006269 4.0e-85 318.9 178 89.3
TAR633G1835 Trochodendron aralioides HOM05D004689 ORTHO05D006269 5.3e-85 318.5 192 85.4
Glyma.13G367400 Glycine max HOM05D004689 ORTHO05D006269 9.0e-85 317.8 176 88.1
Glyma.15G005900 Glycine max HOM05D004689 ORTHO05D006269 1.5e-84 317.0 176 88.1
Ca_23152_v3 Cicer arietinum L. HOM05D004689 ORTHO05D006269 3.4e-84 315.8 177 88.1
Ah.08g211440 Amaranthus hybridus HOM05D004689 ORTHO05D006269 4.5e-84 315.5 175 89.1
PGSC0003DMG400003874 Solanum tuberosum HOM05D004689 ORTHO05D006269 4.5e-84 315.5 176 86.9
CsaV3_3G036230 Cucumis sativus L. HOM05D004689 ORTHO05D006269 7.6e-84 314.7 176 88.6
Potri.016G097600 Populus trichocarpa HOM05D004689 ORTHO05D006269 7.6e-84 314.7 176 89.2
Lalb_Chr10g0099851 Lupinus albus HOM05D004689 ORTHO05D006269 9.9e-84 314.3 175 87.4
Lj3g0015942 Lotus japonicus HOM05D004689 ORTHO05D006269 1.3e-83 313.9 176 87.5
Sed0022535 Sechium edule HOM05D004689 ORTHO05D006269 1.3e-83 313.9 171 90.1
FAN05G0091 Fragaria x ananassa HOM05D004689 ORTHO05D006269 2.2e-83 313.2 185 84.9
FAN05G3347 Fragaria x ananassa HOM05D004689 ORTHO05D006269 2.2e-83 313.2 185 84.9
Potri.006G121300 Populus trichocarpa HOM05D004689 ORTHO05D006269 2.2e-83 313.2 165 92.7
Prupe.7G125300 Prunus persica HOM05D004689 ORTHO05D006269 2.2e-83 313.2 175 89.1
Atru.chr8.1747 Acer truncatum HOM05D004689 ORTHO05D006269 2.9e-83 312.8 185 84.9
Lalb_Chr04g0254861 Lupinus albus HOM05D004689 ORTHO05D006269 3.8e-83 312.4 175 87.4
CAN.G1038.16 Capsicum annuum HOM05D004689 ORTHO05D006269 4.9e-83 312.0 176 86.4
DCAR_020804 Daucus carota HOM05D004689 ORTHO05D006269 4.9e-83 312.0 175 87.4
Medtr8g009970 Medicago truncatula HOM05D004689 ORTHO05D006269 6.4e-83 311.6 177 86.4
Solyc09g008470.4 Solanum lycopersicum HOM05D004689 ORTHO05D006269 6.4e-83 311.6 176 86.4
Lsat_1_v5_gn_1_52460 Lactuca sativa HOM05D004689 ORTHO05D006269 8.4e-83 311.2 171 89.5
Sopen09g003300 Solanum pennellii HOM05D004689 ORTHO05D006269 8.4e-83 311.2 176 86.4
Ciclev10012150m.g Citrus clementina HOM05D004689 ORTHO05D006269 1.4e-82 310.5 167 91.0
SGA_v2.0_scaffold40G15470 Striga asiatica HOM05D004689 ORTHO05D006269 1.9e-82 310.1 179 87.2
Duzib128G1555 Durio zibethinus HOM05D004689 ORTHO05D006269 4.2e-82 308.9 165 90.9
Peaxi162Scf00407g00631 Petunia axillaris HOM05D004689 ORTHO05D006269 4.2e-82 308.9 172 88.4
PSO675G8307 Papaver somniferum HOM05D004689 ORTHO05D006269 9.3e-82 307.8 177 86.4
TWI74G0641 Tripterygium wilfordii HOM05D004689 ORTHO05D006269 9.3e-82 307.8 169 89.3
Hund19382 Selenicereus undatus HOM05D004689 ORTHO05D006269 1.2e-81 307.4 173 89.0
TPR.G17360 Trifolium pratense HOM05D004689 ORTHO05D006269 2.7e-81 306.2 177 86.4
unitig_26.g9238 Utricularia gibba HOM05D004689 ORTHO05D006269 2.7e-81 306.2 174 86.2
MELO3C009381.2 Cucumis melo HOM05D004689 ORTHO05D006269 6.0e-81 305.1 185 83.8
Gohir.D09G140400 Gossypium hirsutum HOM05D004689 ORTHO05D006269 7.9e-81 304.7 169 88.2
Gorai.006G161000 Gossypium raimondii HOM05D004689 ORTHO05D006269 7.9e-81 304.7 169 88.2
RcHm_v2.0_Chr7g0191101 Rosa chinensis HOM05D004689 ORTHO05D006269 1.3e-80 303.9 176 86.4
Sc20g0005690 Simmondsia chinensis HOM05D004689 ORTHO05D006269 1.8e-80 303.5 176 86.9
Gohir.A09G144600 Gossypium hirsutum HOM05D004689 ORTHO05D006269 6.7e-80 301.6 169 87.6
ECA238G3499 Erigeron canadensis HOM05D004689 ORTHO05D006269 8.7e-80 301.2 171 88.3
Migut.J00456 Erythranthe guttata HOM05D004689 ORTHO05D006269 8.7e-80 301.2 177 86.4
PGR119G0162 Punica granatum HOM05D004689 ORTHO05D006269 8.7e-80 301.2 157 93.0
CDE06G0795 Ceratophyllum demersum HOM05D004689 ORTHO05D006269 1.1e-79 300.8 178 86.0
Eucgr.K02436 Eucalyptus grandis HOM05D004689 ORTHO05D006269 1.1e-79 300.8 157 93.0
Oeu042111.1 Olea europaea HOM05D004689 ORTHO05D006269 1.1e-79 300.8 156 92.9
PSO541G4270 Papaver somniferum HOM05D004689 ORTHO05D006269 1.1e-79 300.8 176 84.7
CARHR126450 Cardamine hirsuta HOM05D004689 ORTHO05D006269 1.5e-79 300.4 164 89.0
CDE03G0163 Ceratophyllum demersum HOM05D004689 ORTHO05D006269 4.3e-79 298.9 178 85.4
Thecc.05G071600 Theobroma cacao HOM05D004689 ORTHO05D006269 4.3e-79 298.9 157 92.4
Thecc.05G071900 Theobroma cacao HOM05D004689 ORTHO05D006269 4.3e-79 298.9 157 92.4
THA.LOC104816037 Tarenaya hassleriana HOM05D004689 ORTHO05D006269 5.6e-79 298.5 164 88.4
Aa31LG5G4730 Aethionema arabicum HOM05D004689 ORTHO05D006269 9.6e-79 297.7 171 87.1
RcHm_v2.0_Chr3g0470901 Rosa chinensis HOM05D004689 ORTHO05D006269 1.3e-78 297.4 157 91.7
Nitab4.5_0003314g0100 Nicotiana tabacum HOM05D004689 ORTHO05D006269 3.7e-78 295.8 155 91.6
COL.COLO4_26909 Corchorus olitorius HOM05D004689 ORTHO05D006269 1.1e-77 294.3 156 91.0
AL4G28000 Arabidopsis lyrata HOM05D004689 ORTHO05D006269 1.4e-77 293.9 164 87.2
Aqoxy2G01650 Aquilegia oxysepala HOM05D004689 ORTHO05D006269 1.8e-77 293.5 156 92.3
Carub.0004s1393 Capsella rubella HOM05D004689 ORTHO05D006269 3.1e-77 292.7 164 87.2
Hma1.2p1_0225F.1_g095000 Hydrangea macrophylla HOM05D004689 ORTHO05D006269 3.1e-77 292.7 160 88.1
AT2G32600 Arabidopsis thaliana HOM05D004689 ORTHO05D006269 6.9e-77 291.6 164 86.6
MD12G1106500 Malus domestica HOM05D004689 ORTHO05D006269 6.9e-77 291.6 157 91.7
FvH4_6g16880 Fragaria vesca HOM05D004689 ORTHO05D006269 2.0e-76 290.0 160 88.8
ClCG10G019870 Citrullus lanatus HOM05D004689 ORTHO05D006269 1.3e-75 287.3 193 77.7
C04p17070 Brassica napus HOM05D004689 ORTHO05D006269 1.4e-74 283.9 164 84.1
BolC4t23259H Brassica oleracea HOM05D004689 ORTHO05D006269 1.4e-74 283.9 164 84.1
A05p13300 Brassica napus HOM05D004689 ORTHO05D006269 1.9e-74 283.5 164 84.1
BraA05t20271Z Brassica rapa HOM05D004689 ORTHO05D006269 1.9e-74 283.5 164 84.1
HanXRQChr13g0402661 Helianthus annuus HOM05D004689 ORTHO05D006269 4.2e-74 282.3 158 86.7
Cc06_g04560 Coffea canephora HOM05D004689 ORTHO05D006269 7.1e-74 281.6 233 65.2
Thhalv10017051m.g Eutrema salsugineum HOM05D004689 ORTHO05D006269 7.1e-74 281.6 164 84.1
Sp4g14930 Schrenkiella parvula HOM05D004689 ORTHO05D006269 7.1e-74 281.6 166 83.7
Sabra06G0095500 Salix brachista HOM05D004689 ORTHO05D006269 1.8e-72 276.9 244 62.3
Zm00001eb398100 Zea mays HOM05D004689 ORTHO05D006269 2.3e-72 276.6 176 78.4
HPP92_017214 Vanilla planifolia HOM05D004689 ORTHO05D006269 3.0e-72 276.2 168 82.1
Pp3c15_8160 Physcomitrium patens HOM05D004689 ORTHO05D006269 5.1e-72 275.4 172 80.8
Lj3C990G15 Lonicera japonica HOM05D004689 ORTHO05D006269 1.1e-71 274.2 145 91.7
AagrBONN_evm.TU.Sc2ySwM_344.454 Anthoceros agrestis HOM05D004689 ORTHO05D006269 1.3e-70 270.8 168 82.1
Dinv35815 Davidia involucrata HOM05D004689 ORTHO05D006269 1.6e-70 270.4 150 87.3
Pp3c9_13030 Physcomitrium patens HOM05D004689 ORTHO05D006269 2.0e-68 263.5 177 76.3
Zm00001eb011590 Zea mays HOM05D004689 ORTHO05D006269 2.6e-68 263.1 176 75.6
Mapoly0069s0004 Marchantia polymorpha HOM05D004689 ORTHO05D006269 7.7e-68 261.5 160 81.2
Os03g0263500 Oryza sativa ssp. japonica HOM05D004689 ORTHO05D006269 1.3e-67 260.8 168 75.0
CBR_g54837 Chara braunii HOM05D004689 ORTHO05D006269 8.5e-67 258.1 181 73.5
MD04G1088800 Malus domestica HOM05D004689 ORTHO05D006269 4.6e-65 252.3 144 88.2
Carub.0007s3257 Capsella rubella HOM05D004689 ORTHO05D006269 1.8e-64 250.4 176 74.4
vmacro08797 Vaccinium macrocarpon HOM05D004689 ORTHO05D006269 5.1e-64 248.8 133 89.5
Cpa.g.sc87.109 Carica papaya HOM05D004689 ORTHO05D006269 1.1e-63 247.7 128 92.2
Psat1g060440 Pisum sativum HOM05D004689 ORTHO05D006269 1.5e-63 247.3 164 75.0
Haze_19437 Corylus avellana HOM05D004689 ORTHO05D006269 2.0e-63 246.9 133 89.5
SMO228G0117 Selaginella moellendorffii HOM05D004689 ORTHO05D006269 2.0e-63 246.9 177 72.9
Psat6g037120 Pisum sativum HOM05D005082 ORTHO05D006474 4.8e-62 242.3 142 83.8
MCO12G316 Micromonas commoda HOM05D004689 ORTHO05D006269 1.7e-59 233.8 187 65.2
AUR62043425 Chenopodium quinoa HOM05D004689 ORTHO05D006269 2.6e-55 219.9 121 86.8
SEGI_10194 Sequoiadendron giganteum HOM05D004689 ORTHO05D006269 1.7e-54 217.2 130 80.8
Cre06.g252700 Chlamydomonas reinhardtii HOM05D004689 ORTHO05D006269 2.8e-54 216.5 155 69.7
Haze_05755 Corylus avellana HOM05D004689 ORTHO05D006269 3.1e-53 213.0 136 79.4
AUR62043819 Chenopodium quinoa HOM05D004689 ORTHO05D006269 2.6e-52 209.9 108 91.7
AagrBONN_evm.TU.Sc2ySwM_344.3364 Anthoceros agrestis HOM05D004689 ORTHO05D006269 2.2e-51 206.8 117 88.0
Nitab4.5_0002373g0090 Nicotiana tabacum HOM05D004689 ORTHO05D006269 8.5e-51 204.9 110 88.2
Prupe.4G071900 Prunus persica HOM05D004689 ORTHO05D006269 1.1e-50 204.5 164 67.1
Actinidia31313 Actinidia chinensis HOM05D004689 ORTHO05D006269 1.6e-49 200.7 106 90.6
MBI17_g39319_MAGBIO Magnolia biondii HOM05D004689 ORTHO05D006269 2.6e-47 193.4 109 87.2
PRCOL_00004335 Prasinoderma coloniale HOM05D004689 ORTHO05D006269 1.1e-45 188.0 156 59.0
BcaB02g10459 Brassica carinata HOM05D004689 ORTHO05D006269 3.1e-45 186.4 175 61.1
Haze_26764 Corylus avellana HOM05D004689 ORTHO05D006269 4.5e-44 182.6 125 71.2
ATR0118G005 Amborella trichopoda HOM05D004689 ORTHO05D006269 1.5e-42 177.6 91 92.3
SHI12393 Sapria himalayana HOM05D004689 ORTHO05D006269 1.2e-39 167.9 195 54.9
AagrBONN_evm.TU.Sc2ySwM_344.3466 Anthoceros agrestis HOM05D004689 ORTHO05D006269 4.4e-39 166.0 133 68.4
Haze_06063 Corylus avellana HOM05D004689 ORTHO05D023802 6.3e-38 162.2 91 84.6
Psat0s2549g0120 Pisum sativum HOM05D004689 ORTHO05D006269 2.3e-32 143.7 83 81.9
Nitab4.5_0000349g0040 Nicotiana tabacum HOM05D004689 ORTHO05D006269 3.8e-27 126.3 91 73.6
Dinv37340 Davidia involucrata HOM05D004689 ORTHO05D006269 2.3e-24 117.1 67 85.1
Psat1g060600 Pisum sativum HOM05D004689 ORTHO05D006269 4.1e-21 106.3 58 86.2
Haze_13658 Corylus avellana HOM05D004689 ORTHO05D023802 1.2e-20 104.8 60 81.7
Pp3c4_2800 Physcomitrium patens HOM05D004689 ORTHO05D006269 6.6e-19 99.0 102 58.8
Psat1g060480 Pisum sativum HOM05D004689 ORTHO05D006269 1.6e-17 94.4 51 86.3
Psat1g060520 Pisum sativum HOM05D004689 ORTHO05D006269 1.6e-17 94.4 51 86.3
ATR0118G008 Amborella trichopoda HOM05D004689 ORTHO05D006269 1.4e-13 81.3 44 90.9
MBI17_g39322_MAGBIO Magnolia biondii HOM05D004689 ORTHO05D006269 9.2e-13 78.6 43 88.4
VMungo0219G0001 Vigna mungo HOM05D004689 ORTHO05D006269 9.2e-13 78.6 43 88.4
TAR636G1083 Trochodendron aralioides HOM05D004689 ORTHO05D006269 6.0e-12 75.9 43 83.7
Haze_08645 Corylus avellana HOM05D004689 ORTHO05D023802 3.3e-10 70.1 38 89.5
Haze_08899 Corylus avellana HOM05D004689 ORTHO05D165887 1.2e-09 68.2 61 60.7
Psat4g215720 Pisum sativum HOM05D002324 ORTHO05D002380 2.1e-09 67.4 43 79.1
Nitab4.5_0000349g0010 Nicotiana tabacum HOM05D004689 ORTHO05D006269 2.8e-09 67.0 42 76.2
Haze_05345 Corylus avellana HOM05D004689 ORTHO05D023802 4.0e-08 63.2 38 78.9
Cc00_g35330 Coffea canephora HOM05D004689 ORTHO05D006269 6.8e-08 62.4 31 96.8
Cc00_g23430 Coffea canephora HOM05D004689 ORTHO05D006269 2.0e-07 60.8 31 93.5
MSTRG.5777 Avicennia marina HOM05D004689 ORTHO05D023802 4.4e-07 59.7 38 76.3


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