Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G058900 Manihot esculenta HOM05D003391 ORTHO05D250822 1.1e-44 183.0 91 100.0
Manes.07G058173 Manihot esculenta HOM05D003391 ORTHO05D250310 5.8e-43 177.2 90 97.8
Manes.12G128950 Manihot esculenta HOM05D003391 ORTHO05D249565 5.8e-43 177.2 90 97.8
Manes.13G081678 Manihot esculenta HOM05D003391 ORTHO05D250639 9.9e-43 176.4 90 97.8
Manes.01G037700 Manihot esculenta HOM05D003391 ORTHO05D005563 4.8e-29 131.0 67 100.0
Gohir.A08G160766 Gossypium hirsutum HOM05D003391 ORTHO05D005563 1.6e-24 115.9 67 85.1
Gohir.D08G181000 Gossypium hirsutum HOM05D003391 ORTHO05D005563 1.6e-24 115.9 67 85.1
Gorai.004G190000 Gossypium raimondii HOM05D003391 ORTHO05D005563 1.6e-24 115.9 67 85.1
Duzib068G0467 Durio zibethinus HOM05D003391 ORTHO05D005563 6.0e-24 114.0 67 85.1
COL.COLO4_06714 Corchorus olitorius HOM05D003391 ORTHO05D005563 7.9e-24 113.6 67 83.6
Thecc.03G235800 Theobroma cacao HOM05D003391 ORTHO05D005563 1.8e-23 112.5 67 83.6
Potri.016G023000 Populus trichocarpa HOM05D003391 ORTHO05D005563 1.5e-22 109.4 67 82.1
Sed0012933 Sechium edule HOM05D003391 ORTHO05D005563 1.5e-22 109.4 67 82.1
Ca_11369_v3 Cicer arietinum L. HOM05D003391 ORTHO05D005563 3.3e-22 108.2 68 83.8
Ca_30786_v3 Cicer arietinum L. HOM05D003391 ORTHO05D005563 3.3e-22 108.2 68 83.8
Lalb_Chr18g0057621 Lupinus albus HOM05D003391 ORTHO05D005563 3.3e-22 108.2 68 85.3
CANSAT64G0651 Cannabis sativa HOM05D003391 ORTHO05D005563 4.3e-22 107.8 67 80.6
Medtr2g028270 Medicago truncatula HOM05D003391 ORTHO05D005563 4.3e-22 107.8 68 83.8
arahy.Tifrunner.gnm1.ann1.635YAA Arachis hypogaea HOM05D003391 ORTHO05D005563 5.7e-22 107.5 68 82.4
arahy.Tifrunner.gnm1.ann1.QTWQ8J Arachis hypogaea HOM05D003391 ORTHO05D005563 5.7e-22 107.5 68 82.4
Duzib084G0647 Durio zibethinus HOM05D003391 ORTHO05D005563 5.7e-22 107.5 67 82.1
Sabra16G0023000 Salix brachista HOM05D003391 ORTHO05D005563 9.7e-22 106.7 67 83.6
Sabra16G0029200 Salix brachista HOM05D003391 ORTHO05D005563 9.7e-22 106.7 67 83.6
Ca_00789_v3 Cicer arietinum L. HOM05D003391 ORTHO05D005563 1.3e-21 106.3 67 83.6
QL04p065456 Quercus lobata HOM05D003391 ORTHO05D005563 1.3e-21 106.3 68 80.9
Cfa018226 Carpinus fangiana HOM05D003391 ORTHO05D005563 1.6e-21 105.9 68 83.8
CiPaw.10G102000 Carya illinoinensis HOM05D003391 ORTHO05D005563 2.2e-21 105.5 67 83.6
MELO3C026391.2 Cucumis melo HOM05D003391 ORTHO05D005563 2.2e-21 105.5 68 82.4
CsaV3_4G032190 Cucumis sativus L. HOM05D003391 ORTHO05D005563 2.2e-21 105.5 68 82.4
Psat1g171000 Pisum sativum HOM05D003391 ORTHO05D005563 2.2e-21 105.5 68 82.4
TPR.G10474 Trifolium pratense HOM05D003391 ORTHO05D005563 2.2e-21 105.5 68 82.4
VMungo0540G0836 Vigna mungo HOM05D003391 ORTHO05D005563 2.2e-21 105.5 68 82.4
Atru.chr13.1465 Acer truncatum HOM05D003391 ORTHO05D005563 2.8e-21 105.1 68 80.9
Lalb_Chr15g0088521 Lupinus albus HOM05D003391 ORTHO05D005563 2.8e-21 105.1 68 82.4
Glyma.15G124200 Glycine max HOM05D003391 ORTHO05D005563 3.7e-21 104.8 68 80.9
RcHm_v2.0_Chr2g0154761 Rosa chinensis HOM05D003391 ORTHO05D005563 3.7e-21 104.8 68 79.4
Glyma.09G018300 Glycine max HOM05D003391 ORTHO05D005563 4.8e-21 104.4 68 80.9
Prupe.3G191700 Prunus persica HOM05D003391 ORTHO05D005563 4.8e-21 104.4 68 82.4
FAN05G0705 Fragaria x ananassa HOM05D003391 ORTHO05D005563 6.3e-21 104.0 68 79.4
MD09G1135000 Malus domestica HOM05D003391 ORTHO05D005563 6.3e-21 104.0 68 80.9
Phvul.006G134000 Phaseolus vulgaris HOM05D003391 ORTHO05D005563 6.3e-21 104.0 68 80.9
FvH4_6g40130 Fragaria vesca HOM05D003391 ORTHO05D005563 8.2e-21 103.6 67 77.6
FAN14G1902 Fragaria x ananassa HOM05D003391 ORTHO05D005563 8.2e-21 103.6 67 77.6
Lj6g0008612 Lotus japonicus HOM05D003391 ORTHO05D005563 1.1e-20 103.2 68 79.4
arahy.Tifrunner.gnm1.ann1.MM6MID Arachis hypogaea HOM05D003391 ORTHO05D005563 1.4e-20 102.8 68 79.4
Ciclev10029974m.g Citrus clementina HOM05D003391 ORTHO05D005563 1.8e-20 102.4 68 79.4
FAN02G4219 Fragaria x ananassa HOM05D003391 ORTHO05D005563 1.8e-20 102.4 68 79.4
FAN09G1714 Fragaria x ananassa HOM05D003391 ORTHO05D005563 1.8e-20 102.4 68 79.4
Cpa.g.sc122.39 Carica papaya HOM05D003391 ORTHO05D005563 2.4e-20 102.1 88 67.0
Dinv10208 Davidia involucrata HOM05D003391 ORTHO05D005563 9.0e-20 100.1 69 72.5
MD17G1124000 Malus domestica HOM05D003391 ORTHO05D005563 9.0e-20 100.1 68 79.4
Lj7A654G26 Lonicera japonica HOM05D003391 ORTHO05D005563 1.2e-19 99.8 70 75.7
THA.LOC104809239 Tarenaya hassleriana HOM05D003391 ORTHO05D005563 1.5e-19 99.4 68 75.0
TWI74G0249 Tripterygium wilfordii HOM05D003391 ORTHO05D005563 2.0e-19 99.0 68 77.9
TAR626G0891 Trochodendron aralioides HOM05D003391 ORTHO05D005563 2.6e-19 98.6 70 74.3
PSO541G1880 Papaver somniferum HOM05D003391 ORTHO05D005563 4.5e-19 97.8 70 70.0
PSO675G3205 Papaver somniferum HOM05D003391 ORTHO05D005563 4.5e-19 97.8 70 70.0
Hma1.2p1_0583F.1_g183000 Hydrangea macrophylla HOM05D003391 ORTHO05D005563 1.0e-18 96.7 70 74.3
TWI77G0821 Tripterygium wilfordii HOM05D003391 ORTHO05D005563 1.0e-18 96.7 87 63.2
GSVIVG01016094001 Vitis vinifera HOM05D003391 ORTHO05D005563 1.0e-18 96.7 68 75.0
Aqoxy3G00251 Aquilegia oxysepala HOM05D003391 ORTHO05D005563 2.2e-18 95.5 70 71.4
CSS0023421 Camellia sinensis var. sinensis HOM05D003391 ORTHO05D005563 3.8e-18 94.7 70 74.3
SalBow4G0334 Salvia bowleyana HOM05D003391 ORTHO05D005563 3.8e-18 94.7 69 72.5
vmacro13793 Vaccinium macrocarpon HOM05D003391 ORTHO05D005563 3.8e-18 94.7 69 68.1
Atru.chr13.1440 Acer truncatum HOM05D003391 ORTHO05D005563 5.0e-18 94.4 61 80.3
Aa31LG10G3790 Aethionema arabicum HOM05D003391 ORTHO05D005563 8.5e-18 93.6 68 70.6
MSTRG.9187 Avicennia marina HOM05D003391 ORTHO05D005563 1.1e-17 93.2 69 71.0
CSS0020230 Camellia sinensis var. sinensis HOM05D003391 ORTHO05D005563 1.1e-17 93.2 70 72.9
Eucgr.G02677 Eucalyptus grandis HOM05D003391 ORTHO05D005563 1.1e-17 93.2 67 74.6
Eucgr.L01917 Eucalyptus grandis HOM05D003391 ORTHO05D005563 1.1e-17 93.2 67 74.6
Rhsim11G0087500 Rhododendron simsii HOM05D003391 ORTHO05D005563 1.1e-17 93.2 69 68.1
Migut.F02007 Erythranthe guttata HOM05D003391 ORTHO05D005563 3.2e-17 91.7 69 72.5
MSTRG.27454 Avicennia marina HOM05D003391 ORTHO05D005563 7.2e-17 90.5 69 72.5
Rhsim05G0168000 Rhododendron simsii HOM05D003391 ORTHO05D005563 9.3e-17 90.1 69 65.2
AUR62022296 Chenopodium quinoa HOM05D003391 ORTHO05D005563 2.1e-16 89.0 70 65.7
PGR042G2316 Punica granatum HOM05D003391 ORTHO05D005563 2.1e-16 89.0 68 69.1
HanXRQChr04g0122221 Helianthus annuus HOM05D003391 ORTHO05D005563 2.7e-16 88.6 70 65.7
HPP92_006006 Vanilla planifolia HOM05D003391 ORTHO05D005563 2.7e-16 88.6 72 69.4
Cc06_g14340 Coffea canephora HOM05D003391 ORTHO05D005563 3.6e-16 88.2 69 71.0
Nn7g37683 Nelumbo nucifera HOM05D003391 ORTHO05D005563 4.6e-16 87.8 70 65.7
AUR62023891 Chenopodium quinoa HOM05D003391 ORTHO05D005563 6.1e-16 87.4 70 65.7
Migut.F01784 Erythranthe guttata HOM05D003391 ORTHO05D005563 1.0e-15 86.7 69 66.7
MBI18_g28220_MAGBIO Magnolia biondii HOM05D003391 ORTHO05D005563 1.0e-15 86.7 73 67.1
EL10Ac9g21140 Beta vulgaris HOM05D003391 ORTHO05D005563 1.4e-15 86.3 70 65.7
Lsat_1_v5_gn_7_7561 Lactuca sativa HOM05D003391 ORTHO05D005563 1.4e-15 86.3 78 59.0
BraA05t20918Z Brassica rapa HOM05D003391 ORTHO05D005563 1.8e-15 85.9 91 52.7
ECA236G2623 Erigeron canadensis HOM05D003391 ORTHO05D005563 1.8e-15 85.9 70 64.3
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 2.3e-15 85.5 73 67.1
BolC5t32086H Brassica oleracea HOM05D003391 ORTHO05D005563 3.0e-15 85.1 83 56.6
DCAR_003077 Daucus carota HOM05D003391 ORTHO05D005563 3.0e-15 85.1 70 65.7
CDE02G0628 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 5.1e-15 84.3 73 65.8
Nitab4.5_0000575g0140 Nicotiana tabacum HOM05D003391 ORTHO05D005563 5.1e-15 84.3 70 65.7
SGA_v2.0_scaffold62G21434 Striga asiatica HOM05D003391 ORTHO05D005563 8.8e-15 83.6 86 60.5
BcaB02g11154 Brassica carinata HOM05D003391 ORTHO05D005563 1.1e-14 83.2 68 63.2
A05p20100 Brassica napus HOM05D003391 ORTHO05D005563 1.1e-14 83.2 68 63.2
C05p33590 Brassica napus HOM05D003391 ORTHO05D005563 1.1e-14 83.2 68 63.2
Sp1g37350 Schrenkiella parvula HOM05D003391 ORTHO05D005563 1.1e-14 83.2 68 64.7
Ah.01g004390 Amaranthus hybridus HOM05D003391 ORTHO05D005563 1.5e-14 82.8 70 65.7
Thhalv10011301m.g Eutrema salsugineum HOM05D003391 ORTHO05D005563 1.5e-14 82.8 68 66.2
PGSC0003DMG401012873 Solanum tuberosum HOM05D003391 ORTHO05D005563 1.5e-14 82.8 70 65.7
ATR1098G037 Amborella trichopoda HOM05D003391 ORTHO05D005563 2.5e-14 82.0 72 68.1
Hund02122 Selenicereus undatus HOM05D003391 ORTHO05D005563 2.5e-14 82.0 70 62.9
CARHR040530 Cardamine hirsuta HOM05D003391 ORTHO05D005563 4.3e-14 81.3 68 61.8
Oeu033843.4 Olea europaea HOM05D003391 ORTHO05D005563 4.3e-14 81.3 66 66.7
Solyc04g049490.3 Solanum lycopersicum HOM05D003391 ORTHO05D005563 4.3e-14 81.3 70 65.7
BcaC05g27411 Brassica carinata HOM05D003391 ORTHO05D005563 5.7e-14 80.9 68 61.8
HanXRQChr03g0093781 Helianthus annuus HOM05D003391 ORTHO05D005563 5.7e-14 80.9 71 62.0
CAN.G466.12 Capsicum annuum HOM05D003391 ORTHO05D005563 7.4e-14 80.5 70 64.3
CAN.G998.14 Capsicum annuum HOM05D003391 ORTHO05D005563 7.4e-14 80.5 70 64.3
Peaxi162Scf00072g00087 Petunia axillaris HOM05D003391 ORTHO05D005563 9.7e-14 80.1 70 64.3
Sopen04g019460 Solanum pennellii HOM05D003391 ORTHO05D005563 9.7e-14 80.1 70 64.3
Lsat_1_v5_gn_3_133361 Lactuca sativa HOM05D003391 ORTHO05D005563 1.3e-13 79.7 68 64.7
AL1G58160 Arabidopsis lyrata HOM05D003391 ORTHO05D005563 1.7e-13 79.3 68 61.8
BcaB04g17246 Brassica carinata HOM05D003391 ORTHO05D005563 1.7e-13 79.3 68 61.8
BcaC01g01234 Brassica carinata HOM05D003391 ORTHO05D005563 1.7e-13 79.3 68 61.8
C03p89680 Brassica napus HOM05D003391 ORTHO05D005563 1.7e-13 79.3 68 61.8
BolC3t21285H Brassica oleracea HOM05D003391 ORTHO05D005563 4.8e-13 77.8 68 60.3
ECA240G2134 Erigeron canadensis HOM05D003391 ORTHO05D005563 4.8e-13 77.8 68 57.4
AT1G50500 Arabidopsis thaliana HOM05D003391 ORTHO05D005563 8.2e-13 77.0 68 60.3
Oeu030440.3 Olea europaea HOM05D003391 ORTHO05D005563 8.2e-13 77.0 52 75.0
unitig_899.g14436 Utricularia gibba HOM05D003391 ORTHO05D005563 1.4e-12 76.3 69 60.9
Sc24g0003350 Simmondsia chinensis HOM05D003391 ORTHO05D005563 3.1e-12 75.1 70 58.6
Carub.0001s3957 Capsella rubella HOM05D003391 ORTHO05D005563 3.4e-11 71.6 67 56.7
Nitab4.5_0007706g0020 Nicotiana tabacum HOM05D003391 ORTHO05D005563 5.9e-11 70.9 70 60.0
Zm00001eb144220 Zea mays HOM05D003391 ORTHO05D005563 3.8e-10 68.2 44 75.0
Actinidia37789 Actinidia chinensis HOM05D003391 ORTHO05D005563 3.2e-09 65.1 40 80.0
AL1G58810 Arabidopsis lyrata HOM05D003391 ORTHO05D005563 9.4e-09 63.5 80 47.5
ClCG11G016680 Citrullus lanatus HOM05D003391 ORTHO05D005563 1.6e-08 62.8 40 82.5
SMO196G0220 Selaginella moellendorffii HOM05D003391 ORTHO05D005563 2.7e-08 62.0 62 59.7
Pp3c24_4920 Physcomitrium patens HOM05D003391 ORTHO05D005563 1.4e-07 59.7 81 49.4
Pp3c8_8190 Physcomitrium patens HOM05D003391 ORTHO05D005563 2.3e-07 58.9 80 47.5
Mapoly0030s0152 Marchantia polymorpha HOM05D003391 ORTHO05D005563 3.0e-07 58.5 54 61.1
AT1G50970 Arabidopsis thaliana HOM05D003391 ORTHO05D005563 2.6e-06 55.5 43 67.4
SHI21342 Sapria himalayana HOM05D003391 ORTHO05D005563 9.7e-06 53.5 39 69.2


User provided reference genes

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