Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G104900 Manihot esculenta HOM05D006561 ORTHO05D008097 1.6e-135 486.1 255 100.0
Cfa020616 Carpinus fangiana HOM05D006561 ORTHO05D008097 5.9e-93 344.7 252 67.1
TWI38G0530 Tripterygium wilfordii HOM05D006561 ORTHO05D008097 7.7e-93 344.4 252 68.3
CiPaw.11G166900 Carya illinoinensis HOM05D006561 ORTHO05D008097 2.2e-92 342.8 255 66.7
Haze_09389 Corylus avellana HOM05D006561 ORTHO05D008097 2.7e-90 335.9 252 65.1
Dinv14944 Davidia involucrata HOM05D006561 ORTHO05D008097 1.2e-88 330.5 252 65.9
Potri.011G141200 Populus trichocarpa HOM05D006561 ORTHO05D008097 4.4e-88 328.6 259 66.0
TAR627G0129 Trochodendron aralioides HOM05D006561 ORTHO05D008097 4.4e-88 328.6 256 64.8
Atru.chr2.2390 Acer truncatum HOM05D006561 ORTHO05D008097 1.7e-87 326.6 254 64.6
Thecc.07G098700 Theobroma cacao HOM05D006561 ORTHO05D008097 3.7e-87 325.5 272 60.3
Gohir.D01G047500 Gossypium hirsutum HOM05D006561 ORTHO05D008097 6.3e-87 324.7 254 63.0
Gorai.002G067000 Gossypium raimondii HOM05D006561 ORTHO05D008097 6.3e-87 324.7 254 63.0
Rhsim06G0203200 Rhododendron simsii HOM05D006561 ORTHO05D008097 1.8e-86 323.2 255 63.5
Gohir.A01G061000 Gossypium hirsutum HOM05D006561 ORTHO05D008097 2.4e-86 322.8 254 63.0
Migut.M00775 Erythranthe guttata HOM05D006561 ORTHO05D008097 7.0e-86 321.2 248 64.1
Hma1.2p1_0416F.1_g148410 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 2.0e-85 319.7 251 62.9
Sabra11G0126800 Salix brachista HOM05D006561 ORTHO05D008097 2.0e-85 319.7 257 64.2
MSTRG.15242 Avicennia marina HOM05D006561 ORTHO05D008097 4.5e-85 318.5 252 62.7
CSS0025681 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 2.2e-84 316.2 255 62.4
CSS0029173 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 2.2e-84 316.2 255 62.4
ClCG11G017750 Citrullus lanatus HOM05D006561 ORTHO05D008097 2.2e-84 316.2 251 62.5
Ciclev10009269m.g Citrus clementina HOM05D006561 ORTHO05D008097 2.9e-84 315.8 255 63.5
Eucgr.F01175 Eucalyptus grandis HOM05D006561 ORTHO05D008097 1.1e-83 313.9 254 63.8
Sed0026268 Sechium edule HOM05D006561 ORTHO05D008097 1.5e-83 313.5 251 62.2
Oeu005397.1 Olea europaea HOM05D006561 ORTHO05D008097 3.2e-83 312.4 252 61.1
PGR083G2053 Punica granatum HOM05D006561 ORTHO05D008097 4.0e-81 305.4 258 59.3
Sp3g13360 Schrenkiella parvula HOM05D006561 ORTHO05D008097 3.4e-80 302.4 248 60.5
CsaV3_4G033370 Cucumis sativus L. HOM05D006561 ORTHO05D008097 7.5e-80 301.2 251 60.2
THA.LOC104818093 Tarenaya hassleriana HOM05D006561 ORTHO05D008097 2.2e-79 299.7 249 59.4
Cc05_g11670 Coffea canephora HOM05D006561 ORTHO05D008097 1.4e-78 297.0 248 60.9
MELO3C025617.2 Cucumis melo HOM05D006561 ORTHO05D008097 1.4e-78 297.0 259 58.7
Nn1g06395 Nelumbo nucifera HOM05D006561 ORTHO05D008097 1.4e-78 297.0 254 59.8
PGSC0003DMG401012439 Solanum tuberosum HOM05D006561 ORTHO05D008097 1.4e-78 297.0 253 58.1
GSVIVG01014276001 Vitis vinifera HOM05D006561 ORTHO05D008097 2.4e-78 296.2 218 65.1
A05p34300 Brassica napus HOM05D006561 ORTHO05D008097 5.4e-78 295.0 248 58.5
Hund17607 Selenicereus undatus HOM05D006561 ORTHO05D008097 5.4e-78 295.0 253 58.5
Lsat_1_v5_gn_5_127501 Lactuca sativa HOM05D006561 ORTHO05D008097 7.0e-78 294.7 254 58.7
BcaB06g29539 Brassica carinata HOM05D006561 ORTHO05D008097 9.1e-78 294.3 248 58.5
Duzib213G1006 Durio zibethinus HOM05D006561 ORTHO05D008097 9.1e-78 294.3 249 59.4
Thhalv10021394m.g Eutrema salsugineum HOM05D006561 ORTHO05D008097 9.1e-78 294.3 248 58.9
Aqoxy1G02303 Aquilegia oxysepala HOM05D006561 ORTHO05D008097 1.2e-77 293.9 246 57.3
SHI39306 Sapria himalayana HOM05D006561 ORTHO05D008097 1.2e-77 293.9 247 59.9
SHI39545 Sapria himalayana HOM05D006561 ORTHO05D008097 1.2e-77 293.9 247 59.9
Cpa.g.sc80.2 Carica papaya HOM05D006561 ORTHO05D008097 2.7e-77 292.7 247 59.9
PSO675G8981 Papaver somniferum HOM05D006561 ORTHO05D008097 2.7e-77 292.7 252 57.5
Nitab4.5_0002019g0020 Nicotiana tabacum HOM05D006561 ORTHO05D008097 3.5e-77 292.4 252 57.1
Sc16g0007290 Simmondsia chinensis HOM05D006561 ORTHO05D008097 4.5e-77 292.0 254 59.8
EL10Ac4g08253 Beta vulgaris HOM05D006561 ORTHO05D008097 7.7e-77 291.2 252 57.5
C05p52080 Brassica napus HOM05D006561 ORTHO05D008097 7.7e-77 291.2 248 58.1
BolC5t33893H Brassica oleracea HOM05D006561 ORTHO05D008097 7.7e-77 291.2 248 58.1
Solyc07g062780.3 Solanum lycopersicum HOM05D006561 ORTHO05D008097 1.3e-76 290.4 258 57.8
CARHR090130 Cardamine hirsuta HOM05D006561 ORTHO05D008097 2.3e-76 289.7 248 58.9
Sopen07g031000 Solanum pennellii HOM05D006561 ORTHO05D008097 2.3e-76 289.7 256 58.2
Nitab4.5_0000246g0010 Nicotiana tabacum HOM05D006561 ORTHO05D008097 2.9e-76 289.3 252 56.3
HanXRQChr10g0302511 Helianthus annuus HOM05D006561 ORTHO05D008097 5.0e-76 288.5 252 58.7
BraA05t22251Z Brassica rapa HOM05D006561 ORTHO05D008097 6.6e-76 288.1 255 56.9
ECA234G0004 Erigeron canadensis HOM05D006561 ORTHO05D008097 1.1e-75 287.3 254 57.9
Aa31LG8G2350 Aethionema arabicum HOM05D006724 ORTHO05D008514 7.2e-75 284.6 234 60.3
AL3G27540 Arabidopsis lyrata HOM05D006561 ORTHO05D008097 6.1e-74 281.6 248 59.3
AT3G15150 Arabidopsis thaliana HOM05D006561 ORTHO05D008097 1.0e-73 280.8 249 58.6
VMungo1080G0633 Vigna mungo HOM05D006561 ORTHO05D008097 1.0e-73 280.8 252 57.9
Carub.0003s1480 Capsella rubella HOM05D006561 ORTHO05D008097 1.4e-73 280.4 249 58.2
DCAR_017121 Daucus carota HOM05D006561 ORTHO05D008097 8.9e-73 277.7 256 56.2
Lalb_Chr25g0286221 Lupinus albus HOM05D006561 ORTHO05D008097 1.5e-72 276.9 252 56.0
Peaxi162Scf00069g01837 Petunia axillaris HOM05D006561 ORTHO05D008097 2.0e-72 276.6 254 55.9
Phvul.005G029100 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 2.0e-72 276.6 251 57.0
vmacro11896 Vaccinium macrocarpon HOM05D006561 ORTHO05D008097 2.6e-72 276.2 325 47.1
CANSAT35G0349 Cannabis sativa HOM05D006561 ORTHO05D008097 3.4e-72 275.8 251 55.4
AUR62019482 Chenopodium quinoa HOM05D006561 ORTHO05D008097 5.7e-72 275.0 253 55.3
Prupe.4G174000 Prunus persica HOM05D006561 ORTHO05D008097 9.8e-72 274.2 229 59.0
FvH4_3g19260 Fragaria vesca HOM05D006561 ORTHO05D008097 1.3e-71 273.9 255 55.7
Glyma.13G273500 Glycine max HOM05D006561 ORTHO05D008097 3.7e-71 272.3 253 57.3
RcHm_v2.0_Chr5g0032331 Rosa chinensis HOM05D006561 ORTHO05D008097 3.7e-71 272.3 256 55.1
unitig_747.g21579 Utricularia gibba HOM05D006561 ORTHO05D008097 4.9e-71 271.9 249 55.4
FAN11G0360 Fragaria x ananassa HOM05D006561 ORTHO05D008097 8.3e-71 271.2 255 55.3
FAN25G3572 Fragaria x ananassa HOM05D006561 ORTHO05D008097 2.4e-70 269.6 255 55.3
ATR0602G252 Amborella trichopoda HOM05D006561 ORTHO05D008097 3.2e-70 269.2 254 53.1
Lj8A153G39 Lonicera japonica HOM05D006561 ORTHO05D008097 4.1e-70 268.9 205 65.9
Psat0s1402g0080 Pisum sativum HOM05D006561 ORTHO05D008097 9.2e-70 267.7 247 53.8
MBI02_g25404_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 5.9e-69 265.0 253 56.5
MD03G1235300 Malus domestica HOM05D006561 ORTHO05D008097 5.9e-69 265.0 250 55.6
Ca_03532_v3 Cicer arietinum L. HOM05D006561 ORTHO05D008097 1.0e-68 264.2 251 55.4
Zm00001eb295840 Zea mays HOM05D006561 ORTHO05D008097 2.3e-68 263.1 243 53.9
TPR.G7947 Trifolium pratense HOM05D006561 ORTHO05D008097 8.6e-68 261.2 251 54.2
AUR62036152 Chenopodium quinoa HOM05D006561 ORTHO05D008097 1.9e-67 260.0 253 53.0
Medtr2g078640 Medicago truncatula HOM05D006561 ORTHO05D008097 6.1e-66 255.0 247 51.0
CAN.G162.30 Capsicum annuum HOM05D006561 ORTHO05D008097 1.0e-65 254.2 213 56.8
Phvul.005G075200 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 3.7e-63 245.7 211 57.8
arahy.Tifrunner.gnm1.ann1.RM2LTG Arachis hypogaea HOM05D006561 ORTHO05D008097 6.4e-63 245.0 250 52.8
SGA_v2.0_scaffold34G13795 Striga asiatica HOM05D006561 ORTHO05D008097 2.7e-61 239.6 206 59.2
HPP92_024567 Vanilla planifolia HOM05D006561 ORTHO05D008097 6.0e-61 238.4 299 46.2
MBI02_g44100_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 3.6e-58 229.2 222 55.0
MD11G1255800 Malus domestica HOM05D006561 ORTHO05D008097 6.8e-57 224.9 183 60.7
Ah.06g184730 Amaranthus hybridus HOM05D006561 ORTHO05D008097 7.5e-56 221.5 252 50.4
Lj3g0026269 Lotus japonicus HOM05D006561 ORTHO05D008097 7.5e-56 221.5 204 55.4
arahy.Tifrunner.gnm1.ann1.YD6KBQ Arachis hypogaea HOM05D006561 ORTHO05D008097 2.5e-51 206.5 249 47.8
QL08p023698 Quercus lobata HOM05D006561 ORTHO05D008097 8.3e-47 191.4 137 67.2
PSO541G4753 Papaver somniferum HOM05D006561 ORTHO05D008097 5.1e-44 182.2 189 50.3
Pp3c22_18560 Physcomitrium patens HOM05D006561 ORTHO05D008097 8.6e-44 181.4 251 38.2
Actinidia12544 Actinidia chinensis HOM05D006561 ORTHO05D008097 1.5e-43 180.6 181 52.5
Actinidia07498 Actinidia chinensis HOM05D006561 ORTHO05D008097 1.9e-43 180.3 127 69.3
AagrBONN_evm.TU.Sc2ySwM_228.4556 Anthoceros agrestis HOM05D006561 ORTHO05D008097 4.2e-38 162.5 287 35.2
CDE08G0579 Ceratophyllum demersum HOM05D006561 ORTHO05D008097 1.6e-37 160.6 147 55.1
Mapoly0096s0048 Marchantia polymorpha HOM05D006561 ORTHO05D008097 1.3e-36 157.5 249 34.9
Haze_09400 Corylus avellana HOM05D006561 ORTHO05D008097 1.6e-34 150.6 130 61.5
FAN16G3278 Fragaria x ananassa HOM05D006561 ORTHO05D008097 2.4e-33 146.7 564 25.0
Hma1.2p1_0416F.1_g148400 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 1.3e-31 141.0 166 48.8
QL08p023707 Quercus lobata HOM05D006561 ORTHO05D008097 3.8e-31 139.4 131 57.3
CBR_g861 Chara braunii HOM05D006561 ORTHO05D008097 1.2e-29 134.4 218 33.9
SMO143G0268 Selaginella moellendorffii HOM05D006561 ORTHO05D008097 1.6e-29 134.0 240 37.5
SMO265G0056 Selaginella moellendorffii HOM05D006561 ORTHO05D008097 5.1e-28 129.0 216 38.0
arahy.Tifrunner.gnm1.ann1.YKS4T6 Arachis hypogaea HOM05D006561 ORTHO05D008097 2.7e-21 106.7 143 43.4
Nn5g27383 Nelumbo nucifera HOM05D006561 ORTHO05D008097 3.5e-21 106.3 97 54.6
Pp3c23_10880 Physcomitrium patens HOM05D006561 ORTHO05D008097 7.6e-16 88.6 123 35.8
PRCOL_00000682 Prasinoderma coloniale HOM05D006561 ORTHO05D008097 8.4e-15 85.1 234 28.6
Mapoly0066s0041 Marchantia polymorpha HOM05D006561 ORTHO05D008097 1.6e-13 80.9 89 42.7
Pp3c20_12000 Physcomitrium patens HOM05D006561 ORTHO05D008097 6.7e-12 75.5 116 35.3
Os05g0563500 Oryza sativa ssp. japonica HOM05D006561 ORTHO05D008097 2.1e-10 70.5 80 48.8
Haze_09398 Corylus avellana HOM05D006561 ORTHO05D008097 1.2e-08 64.7 57 63.2
Haze_09393 Corylus avellana HOM05D006561 ORTHO05D008097 5.8e-08 62.4 110 40.0
Pp3c23_16570 Physcomitrium patens HOM05D006561 ORTHO05D309072 1.7e-07 60.8 74 41.9
Haze_09394 Corylus avellana HOM05D006561 ORTHO05D165302 4.2e-06 56.2 130 33.8


User provided reference genes

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