Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G082300 Manihot esculenta HOM05D004663 ORTHO05D006325 9.9e-183 643.3 315 100.0
TWI74G1669 Tripterygium wilfordii HOM05D004663 ORTHO05D006325 5.7e-138 494.6 315 78.4
GSVIVG01010186001 Vitis vinifera HOM05D004663 ORTHO05D006325 9.7e-138 493.8 321 75.4
Atru.chr11.1191 Acer truncatum HOM05D004663 ORTHO05D006325 1.7e-137 493.0 316 76.3
Atru.chr11.1197 Acer truncatum HOM05D004663 ORTHO05D006325 1.7e-137 493.0 316 76.3
Potri.010G169600 Populus trichocarpa HOM05D004663 ORTHO05D006325 1.6e-135 486.5 315 77.8
Thecc.02G295300 Theobroma cacao HOM05D004663 ORTHO05D006325 4.5e-135 485.0 318 75.5
Nn4g24912 Nelumbo nucifera HOM05D004663 ORTHO05D006325 3.6e-132 475.3 320 73.1
Prupe.1G344500 Prunus persica HOM05D004663 ORTHO05D006325 4.4e-130 468.4 315 74.3
Eucgr.J00843 Eucalyptus grandis HOM05D004663 ORTHO05D006325 1.1e-128 463.8 329 72.3
Duzib251G0299 Durio zibethinus HOM05D004663 ORTHO05D006325 3.1e-128 462.2 320 73.4
CSS0001950 Camellia sinensis var. sinensis HOM05D004663 ORTHO05D006325 7.0e-128 461.1 338 69.8
CiPaw.06G057700 Carya illinoinensis HOM05D004663 ORTHO05D006325 1.6e-127 459.9 326 70.6
THA.LOC104820417 Tarenaya hassleriana HOM05D004663 ORTHO05D006325 2.0e-127 459.5 327 69.4
Glyma.12G028400 Glycine max HOM05D004663 ORTHO05D006325 3.5e-127 458.8 315 72.7
Hund24313 Selenicereus undatus HOM05D004663 ORTHO05D006325 4.5e-127 458.4 332 70.5
Lj3g0017139 Lotus japonicus HOM05D004663 ORTHO05D006325 2.2e-126 456.1 317 72.9
MD16G1006100 Malus domestica HOM05D004663 ORTHO05D006325 2.9e-126 455.7 316 73.4
CAN.G1846.2 Capsicum annuum HOM05D004663 ORTHO05D006325 5.0e-126 454.9 318 72.0
Hma1.2p1_0499F.1_g166870 Hydrangea macrophylla HOM05D004663 ORTHO05D006325 1.5e-125 453.4 344 69.2
COL.COLO4_16617 Corchorus olitorius HOM05D004663 ORTHO05D006325 9.4e-125 450.7 358 65.9
Actinidia13293 Actinidia chinensis HOM05D004663 ORTHO05D006325 2.7e-124 449.1 342 68.4
PGSC0003DMG400019834 Solanum tuberosum HOM05D004663 ORTHO05D006325 3.6e-124 448.7 321 69.5
arahy.Tifrunner.gnm1.ann1.W91FXI Arachis hypogaea HOM05D004663 ORTHO05D006325 8.0e-124 447.6 316 70.6
AL3G31940 Arabidopsis lyrata HOM05D004663 ORTHO05D006325 1.4e-123 446.8 329 69.9
arahy.Tifrunner.gnm1.ann1.NK7YGL Arachis hypogaea HOM05D004663 ORTHO05D006325 4.0e-123 445.3 316 70.6
RcHm_v2.0_Chr4g0446361 Rosa chinensis HOM05D004663 ORTHO05D006325 4.0e-123 445.3 314 72.0
Migut.L00857 Erythranthe guttata HOM05D004663 ORTHO05D006325 6.8e-123 444.5 317 68.8
Solyc02g021060.4 Solanum lycopersicum HOM05D004663 ORTHO05D006325 6.8e-123 444.5 321 68.8
Sopen02g005340 Solanum pennellii HOM05D004663 ORTHO05D006325 6.8e-123 444.5 321 68.8
FvH4_4g36650 Fragaria vesca HOM05D004663 ORTHO05D006325 8.8e-123 444.1 320 70.9
Gohir.D12G156000 Gossypium hirsutum HOM05D004663 ORTHO05D006325 1.5e-122 443.4 315 72.1
Gorai.008G168600 Gossypium raimondii HOM05D004663 ORTHO05D006325 3.4e-122 442.2 315 71.7
Haze_11737 Corylus avellana HOM05D004663 ORTHO05D006325 4.4e-122 441.8 347 67.1
FAN12G1833 Fragaria x ananassa HOM05D004663 ORTHO05D006325 5.7e-122 441.4 320 70.6
Thhalv10021116m.g Eutrema salsugineum HOM05D004663 ORTHO05D006325 9.8e-122 440.7 330 68.5
Rhsim05G0224300 Rhododendron simsii HOM05D004663 ORTHO05D006325 9.8e-122 440.7 329 65.3
AT3G18630 Arabidopsis thaliana HOM05D004663 ORTHO05D006325 1.7e-121 439.9 326 69.6
Aa31LG8G5480 Aethionema arabicum HOM05D004663 ORTHO05D006325 2.2e-121 439.5 323 68.7
HPP92_022410 Vanilla planifolia HOM05D004663 ORTHO05D006325 2.2e-121 439.5 319 68.7
BcaB06g25915 Brassica carinata HOM05D004663 ORTHO05D006325 4.8e-121 438.3 320 69.4
PGR142G1504 Punica granatum HOM05D004663 ORTHO05D006325 8.3e-121 437.6 316 69.6
Sp3g16700 Schrenkiella parvula HOM05D004663 ORTHO05D006325 1.1e-120 437.2 328 67.4
TPR.G21555 Trifolium pratense HOM05D004663 ORTHO05D006325 1.1e-120 437.2 317 71.6
Ca_03037_v3 Cicer arietinum L. HOM05D004663 ORTHO05D006325 1.8e-120 436.4 276 75.7
Sc10g0005860 Simmondsia chinensis HOM05D004663 ORTHO05D006325 3.1e-120 435.6 316 69.3
TAR629G1859 Trochodendron aralioides HOM05D004663 ORTHO05D006325 3.1e-120 435.6 324 67.6
VMungo1127G1383 Vigna mungo HOM05D004663 ORTHO05D006325 3.1e-120 435.6 346 65.9
ClCG11G001190 Citrullus lanatus HOM05D004663 ORTHO05D006325 5.4e-120 434.9 315 71.1
ECA233G5178 Erigeron canadensis HOM05D004663 ORTHO05D006325 7.0e-120 434.5 341 65.4
Psat7g174040 Pisum sativum HOM05D004663 ORTHO05D006325 9.1e-120 434.1 318 71.1
Cc11_g05100 Coffea canephora HOM05D004663 ORTHO05D006325 1.2e-119 433.7 341 66.6
CsaV3_5G013250 Cucumis sativus L. HOM05D004663 ORTHO05D006325 1.2e-119 433.7 313 70.9
Medtr4g074330 Medicago truncatula HOM05D004663 ORTHO05D006325 1.2e-119 433.7 317 71.0
CARHR094010 Cardamine hirsuta HOM05D004663 ORTHO05D006325 1.6e-119 433.3 331 67.7
Carub.0003s1841 Capsella rubella HOM05D004663 ORTHO05D006325 5.9e-119 431.4 327 68.2
BcaC05g28590 Brassica carinata HOM05D004663 ORTHO05D006325 7.7e-119 431.0 318 69.2
C05p46970 Brassica napus HOM05D004663 ORTHO05D006325 7.7e-119 431.0 318 69.2
BolC5t33426H Brassica oleracea HOM05D004663 ORTHO05D006325 7.7e-119 431.0 318 69.2
A05p30980 Brassica napus HOM05D004663 ORTHO05D006325 1.0e-118 430.6 317 68.8
Lsat_1_v5_gn_8_32481 Lactuca sativa HOM05D004663 ORTHO05D006325 1.0e-118 430.6 337 65.6
BraA05t21940Z Brassica rapa HOM05D004663 ORTHO05D006325 8.6e-118 427.6 317 68.5
HanXRQChr13g0390021 Helianthus annuus HOM05D004663 ORTHO05D006325 1.1e-117 427.2 337 63.8
CANSAT35G0206 Cannabis sativa HOM05D004663 ORTHO05D006325 4.2e-117 425.2 312 69.9
HanXRQChr13g0388091 Helianthus annuus HOM05D004663 ORTHO05D006325 5.5e-117 424.9 337 63.5
Sed0002621 Sechium edule HOM05D004663 ORTHO05D006325 7.2e-117 424.5 311 69.1
EL10Ac9g22902 Beta vulgaris HOM05D004663 ORTHO05D006325 1.6e-116 423.3 275 73.5
DCAR_026912 Daucus carota HOM05D004663 ORTHO05D006325 1.6e-116 423.3 364 61.3
PSO017G2988 Papaver somniferum HOM05D004663 ORTHO05D006325 8.0e-116 421.0 315 65.7
Lalb_Chr03g0024891 Lupinus albus HOM05D004663 ORTHO05D006325 5.2e-115 418.3 314 69.1
BcaC09g48820 Brassica carinata HOM05D004663 ORTHO05D006325 1.2e-114 417.2 316 66.5
C01p45610 Brassica napus HOM05D004663 ORTHO05D006325 1.2e-114 417.2 316 66.5
BolC1t04522H Brassica oleracea HOM05D004663 ORTHO05D006325 1.2e-114 417.2 316 66.5
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 2.0e-114 416.4 303 71.3
PSO675G5757 Papaver somniferum HOM05D004663 ORTHO05D006325 2.0e-114 416.4 314 65.0
TAR628G1419 Trochodendron aralioides HOM05D004663 ORTHO05D006325 2.0e-114 416.4 314 67.2
Ah.01g013090 Amaranthus hybridus HOM05D004663 ORTHO05D006325 3.4e-114 415.6 318 65.1
Phvul.011G031800 Phaseolus vulgaris HOM05D004663 ORTHO05D006325 3.4e-114 415.6 294 72.1
Zm00001eb066560 Zea mays HOM05D004663 ORTHO05D006325 1.3e-113 413.7 315 65.4
Gohir.A12G152600 Gossypium hirsutum HOM05D004663 ORTHO05D006325 1.8e-112 409.8 292 72.3
Nitab4.5_0002192g0110 Nicotiana tabacum HOM05D004663 ORTHO05D006325 1.8e-112 409.8 315 68.6
Nitab4.5_0004043g0010 Nicotiana tabacum HOM05D004663 ORTHO05D006325 3.1e-112 409.1 315 67.9
ATR0618G342 Amborella trichopoda HOM05D004663 ORTHO05D006325 4.1e-112 408.7 296 67.6
MSTRG.8079 Avicennia marina HOM05D004663 ORTHO05D006325 2.0e-111 406.4 293 69.6
SGA_v2.0_scaffold258G45746 Striga asiatica HOM05D004663 ORTHO05D006325 2.7e-111 406.0 261 73.2
FAN07G1521 Fragaria x ananassa HOM05D004663 ORTHO05D006325 6.6e-110 401.4 296 69.6
Duzib128G0407 Durio zibethinus HOM05D004663 ORTHO05D006325 8.0e-108 394.4 293 70.0
BraA01t03662Z Brassica rapa HOM05D004663 ORTHO05D006325 1.4e-107 393.7 315 65.4
Os04g0673400 Oryza sativa ssp. japonica HOM05D004663 ORTHO05D006325 4.0e-107 392.1 312 62.5
AUR62012865 Chenopodium quinoa HOM05D004663 ORTHO05D006325 7.5e-106 387.9 337 60.2
CDE05G3445 Ceratophyllum demersum HOM05D004663 ORTHO05D006325 2.2e-105 386.3 315 61.3
Peaxi162Scf00818g00118 Petunia axillaris HOM05D004663 ORTHO05D006325 2.4e-104 382.9 306 67.3
AUR62017645 Chenopodium quinoa HOM05D004663 ORTHO05D006325 3.2e-104 382.5 345 57.7
SalBow2G2230 Salvia bowleyana HOM05D004663 ORTHO05D006325 1.0e-102 377.5 209 83.3
A01p35830 Brassica napus HOM05D004663 ORTHO05D006325 2.3e-102 376.3 318 63.2
SEGI_04236 Sequoiadendron giganteum HOM05D004663 ORTHO05D006325 5.0e-102 375.2 277 62.5
Dinv11709 Davidia involucrata HOM05D004663 ORTHO05D006325 2.5e-101 372.9 289 66.4
Sabra10G0129400 Salix brachista HOM05D004663 ORTHO05D006325 4.7e-100 368.6 268 70.9
HPP92_027507 Vanilla planifolia HOM05D004663 ORTHO05D006325 6.2e-100 368.2 209 81.8
Pp3c14_15380 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.4e-99 367.1 273 63.0
Lj3C851G4 Lonicera japonica HOM05D005588 ORTHO05D006615 5.2e-99 365.2 224 78.1
SHI04172 Sapria himalayana HOM05D004663 ORTHO05D006325 2.6e-98 362.8 365 54.5
Hma1.2p1_0499F.1_g166860 Hydrangea macrophylla HOM05D004663 ORTHO05D006325 7.5e-98 361.3 294 66.7
Mapoly0028s0106 Marchantia polymorpha HOM05D004663 ORTHO05D006325 9.8e-98 360.9 273 63.0
Medtr4g074300 Medicago truncatula HOM05D004663 ORTHO05D006325 9.8e-98 360.9 283 62.2
AagrBONN_evm.TU.Sc2ySwM_344.3482 Anthoceros agrestis HOM05D004663 ORTHO05D006325 2.9e-97 359.4 274 61.7
SMO361G0720 Selaginella moellendorffii HOM05D004663 ORTHO05D006325 2.0e-95 353.2 270 60.7
MELO3C026796.2 Cucumis melo HOM05D004663 ORTHO05D006325 1.0e-94 350.9 265 68.7
Medtr4g074280 Medicago truncatula HOM05D004663 ORTHO05D006325 9.2e-88 327.8 277 57.4
Oeu044073.1 Olea europaea HOM05D000222 ORTHO05D004962 3.3e-85 319.3 316 56.3
CBR_g10874 Chara braunii HOM05D004663 ORTHO05D006325 2.4e-83 313.2 229 62.4
MCO16G090 Micromonas commoda HOM05D004663 ORTHO05D006325 2.1e-79 300.1 226 61.9
SMO361G0033 Selaginella moellendorffii HOM05D004663 ORTHO05D006325 3.5e-79 299.3 243 58.0
SMO087G0003 Selaginella moellendorffii HOM05D004663 ORTHO05D006325 5.6e-77 292.0 243 57.6
Cpa.g.sc0.166 Carica papaya HOM05D004663 ORTHO05D006325 1.2e-76 290.8 224 67.0
MBI03_g05116_MAGBIO Magnolia biondii HOM05D004663 ORTHO05D006325 1.7e-73 280.4 215 69.8
Ciclev10006661m.g Citrus clementina HOM05D004663 ORTHO05D006325 3.2e-72 276.2 224 65.6
unitig_22.g6361 Utricularia gibba HOM05D004663 ORTHO05D006325 3.3e-69 266.2 166 75.3
Cre17.g746347 Chlamydomonas reinhardtii HOM05D004663 ORTHO05D006325 6.9e-67 258.5 296 46.3
Ca_29479_v3 Cicer arietinum L. HOM05D004663 ORTHO05D006325 6.0e-63 245.4 216 54.2
Lj9C88T6 Lonicera japonica HOM05D004663 ORTHO05D006325 4.5e-58 229.2 232 53.9
Haze_26212 Corylus avellana HOM05D004663 ORTHO05D006325 5.8e-58 228.8 221 51.1
PRCOL_00002421 Prasinoderma coloniale HOM05D001829 ORTHO05D007093 2.8e-52 209.9 182 54.4
Lju1225A1T39 Lonicera japonica HOM05D004663 ORTHO05D006325 1.0e-49 201.4 220 52.3
MD03G1100100 Malus domestica HOM05D004663 ORTHO05D006325 7.1e-48 195.3 109 82.6
arahy.Tifrunner.gnm1.ann1.AZJV2P Arachis hypogaea HOM05D004663 ORTHO05D006325 1.8e-43 180.6 119 73.9
Pp3c9_12680 Physcomitrium patens HOM05D004663 ORTHO05D012250 1.4e-40 171.0 198 46.5
Pp3c15_19430 Physcomitrium patens HOM05D004663 ORTHO05D006325 5.5e-40 169.1 198 46.0
Glyma.08G121000 Glycine max HOM05D004663 ORTHO05D006325 2.1e-39 167.2 100 78.0
Pp3c16_10730 Physcomitrium patens HOM05D004663 ORTHO05D006325 8.8e-38 161.8 198 45.5
Pp3c16_12590 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.1e-37 161.4 198 43.9
Glyma.11G103600 Glycine max HOM05D004663 ORTHO05D006325 2.5e-37 160.2 104 76.9
MBI03_g05117_MAGBIO Magnolia biondii HOM05D004663 ORTHO05D006325 6.3e-36 155.6 85 84.7
Lju1225C2G8 Lonicera japonica HOM05D004663 ORTHO05D006325 3.4e-34 149.8 97 75.3
Pp3c16_6060 Physcomitrium patens HOM05D004663 ORTHO05D012250 1.4e-32 144.4 198 41.4
arahy.Tifrunner.gnm1.ann1.A394HF Arachis hypogaea HOM05D004663 ORTHO05D006325 1.9e-32 144.1 113 62.8
Pp3s67_100 Physcomitrium patens HOM05D004663 ORTHO05D006325 4.2e-32 142.9 184 42.4
Lalb_Chr01g0001561 Lupinus albus HOM05D004663 ORTHO05D006325 1.4e-27 127.9 165 47.3
Pp3c10_11550 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.4e-27 127.9 198 37.4
Medtr4g077140 Medicago truncatula HOM05D004663 ORTHO05D006325 1.5e-26 124.4 84 70.2
Pp3c14_3990 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.3e-25 121.3 175 37.1
Pp3c14_4000 Physcomitrium patens HOM05D004663 ORTHO05D012250 1.3e-25 121.3 175 37.1
Pp3c11_15750 Physcomitrium patens HOM05D004663 ORTHO05D006325 2.9e-25 120.2 198 34.8
Pp3c1_10590 Physcomitrium patens HOM05D004663 ORTHO05D006325 5.0e-25 119.4 139 45.3
CBR_g4801 Chara braunii HOM05D004663 ORTHO05D134352 2.1e-23 114.0 138 46.4
Pp3c1_280 Physcomitrium patens HOM05D004663 ORTHO05D006325 6.3e-20 102.4 198 32.3
Pp3c8_4630 Physcomitrium patens HOM05D004663 ORTHO05D311796 6.5e-17 92.4 180 31.1
Pp3c6_15710 Physcomitrium patens HOM05D004663 ORTHO05D313664 5.2e-14 82.8 198 31.8
Medtr3g063510 Medicago truncatula HOM05D004663 ORTHO05D006325 3.5e-10 70.1 56 55.4
AUR62002800 Chenopodium quinoa HOM05D004663 ORTHO05D006325 1.9e-08 64.3 42 69.0
Medtr4g074270 Medicago truncatula HOM05D004663 ORTHO05D006325 1.2e-07 61.6 68 45.6
Pp3c4_1950 Physcomitrium patens HOM05D004663 ORTHO05D318537 2.7e-07 60.5 49 59.2
Pp3c4_24930 Physcomitrium patens HOM05D004663 ORTHO05D006325 3.6e-07 60.1 103 34.0


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