Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G162200 Manihot esculenta HOM05D005614 ORTHO05D006759 7.2e-133 477.2 242 100.0
Potri.005G176600 Populus trichocarpa HOM05D005614 ORTHO05D006759 3.1e-115 418.7 243 88.1
TWI79G0333 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 1.9e-112 409.5 241 84.6
Ciclev10002002m.g Citrus clementina HOM05D005614 ORTHO05D006759 1.6e-108 396.4 241 81.3
Thecc.08G123600 Theobroma cacao HOM05D005614 ORTHO05D006759 3.6e-108 395.2 241 80.9
Gohir.A05G234600 Gossypium hirsutum HOM05D005614 ORTHO05D006759 1.1e-107 393.7 241 80.1
Cpa.g.sc36.54 Carica papaya HOM05D005614 ORTHO05D006759 1.4e-107 393.3 241 80.1
RcHm_v2.0_Chr6g0295621 Rosa chinensis HOM05D005614 ORTHO05D006759 2.3e-107 392.5 241 80.9
GSVIVG01008884001 Vitis vinifera HOM05D005614 ORTHO05D006759 2.6e-106 389.0 242 81.8
Atru.chr13.1437_Atru.chr13.1438 Acer truncatum HOM05D005614 ORTHO05D006759 5.8e-106 387.9 241 80.1
Gorai.009G245300 Gossypium raimondii HOM05D005614 ORTHO05D006759 7.5e-106 387.5 241 79.3
CsaV3_2G009350 Cucumis sativus L. HOM05D005614 ORTHO05D006759 2.9e-105 385.6 241 78.4
Prupe.1G500100 Prunus persica HOM05D005614 ORTHO05D006759 8.3e-105 384.0 241 80.5
Sed0025863 Sechium edule HOM05D005614 ORTHO05D006759 1.4e-104 383.3 241 78.8
THA.LOC104806819 Tarenaya hassleriana HOM05D005614 ORTHO05D006759 5.4e-104 381.3 241 78.0
FvH4_2g26720 Fragaria vesca HOM05D005614 ORTHO05D006759 7.1e-104 380.9 241 78.8
CiPaw.05G223000 Carya illinoinensis HOM05D005614 ORTHO05D006759 1.2e-103 380.2 241 78.0
MD15G1351400 Malus domestica HOM05D005614 ORTHO05D006759 4.6e-103 378.3 242 79.8
PGR042G1492 Punica granatum HOM05D005614 ORTHO05D006759 1.0e-102 377.1 241 78.0
Duzib093G1836 Durio zibethinus HOM05D005614 ORTHO05D006759 2.3e-102 375.9 268 71.6
CANSAT54G1242 Cannabis sativa HOM05D005614 ORTHO05D006759 8.6e-102 374.0 242 77.3
QL09p035347 Quercus lobata HOM05D005614 ORTHO05D006759 1.5e-101 373.2 244 76.2
Lalb_Chr23g0270981 Lupinus albus HOM05D005614 ORTHO05D006759 4.7e-100 368.2 243 75.3
Thhalv10008316m.g Eutrema salsugineum HOM05D005614 ORTHO05D006759 6.2e-100 367.9 244 76.2
ClCG08G005590 Citrullus lanatus HOM05D005614 ORTHO05D006759 8.1e-100 367.5 278 68.7
PSO782G2082 Papaver somniferum HOM05D005614 ORTHO05D006759 1.8e-99 366.3 247 76.9
PSO170G2981 Papaver somniferum HOM05D005614 ORTHO05D006759 8.9e-99 364.0 247 76.1
Aa31LG6G9300 Aethionema arabicum HOM05D005614 ORTHO05D006759 1.2e-98 363.6 241 74.7
BcaB03g12976 Brassica carinata HOM05D005614 ORTHO05D006759 1.2e-98 363.6 244 76.2
CARHR138110 Cardamine hirsuta HOM05D005614 ORTHO05D006759 1.2e-98 363.6 243 74.9
FAN20G0890 Fragaria x ananassa HOM05D005614 ORTHO05D006759 1.2e-98 363.6 241 75.1
Sp1g16310 Schrenkiella parvula HOM05D005614 ORTHO05D006759 1.2e-98 363.6 244 75.4
Ca_15193_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 2.6e-98 362.5 241 74.3
Dinv07241 Davidia involucrata HOM05D005614 ORTHO05D006759 2.6e-98 362.5 246 76.4
Sed0022578 Sechium edule HOM05D005614 ORTHO05D006759 7.6e-98 360.9 253 73.1
BcaB07g31845 Brassica carinata HOM05D005614 ORTHO05D006759 1.7e-97 359.8 244 75.4
Lj1g0021555 Lotus japonicus HOM05D005614 ORTHO05D006759 1.7e-97 359.8 242 74.0
Phvul.009G124300 Phaseolus vulgaris HOM05D005614 ORTHO05D006759 2.9e-97 359.0 241 73.0
AUR62027890 Chenopodium quinoa HOM05D005614 ORTHO05D006759 4.9e-97 358.2 248 71.4
TAR628G1424 Trochodendron aralioides HOM05D005614 ORTHO05D006759 6.4e-97 357.8 245 75.1
AL1G30720 Arabidopsis lyrata HOM05D005614 ORTHO05D006759 1.1e-96 357.1 245 73.9
AT1G18340 Arabidopsis thaliana HOM05D005614 ORTHO05D006759 2.4e-96 355.9 245 73.1
C05p16610 Brassica napus HOM05D005614 ORTHO05D006759 4.1e-96 355.1 244 73.8
BolC8t49486H Brassica oleracea HOM05D005614 ORTHO05D006759 4.1e-96 355.1 244 74.2
A06p14370 Brassica napus HOM05D005614 ORTHO05D006759 5.4e-96 354.8 244 73.8
Actinidia03480 Actinidia chinensis HOM05D005614 ORTHO05D006759 7.1e-96 354.4 244 75.0
BolC5t30360H Brassica oleracea HOM05D005614 ORTHO05D006759 1.6e-95 353.2 244 73.8
BcaC05g25728 Brassica carinata HOM05D005614 ORTHO05D006759 3.5e-95 352.1 246 72.8
BraA06t24565Z Brassica rapa HOM05D005614 ORTHO05D006759 3.5e-95 352.1 244 73.4
Glyma.04G250400 Glycine max HOM05D005614 ORTHO05D006759 3.5e-95 352.1 243 71.6
Carub.0001s1797 Capsella rubella HOM05D005614 ORTHO05D006759 4.6e-95 351.7 245 72.7
Sc01g0001200 Simmondsia chinensis HOM05D005614 ORTHO05D006759 4.6e-95 351.7 256 70.7
FAN15G2492 Fragaria x ananassa HOM05D005614 ORTHO05D006759 6.0e-95 351.3 262 70.2
Glyma.06G112400 Glycine max HOM05D005614 ORTHO05D006759 1.3e-94 350.1 243 72.0
CARHR018930 Cardamine hirsuta HOM05D005614 ORTHO05D006759 2.3e-94 349.4 242 74.0
FAN27G1664 Fragaria x ananassa HOM05D005614 ORTHO05D006759 2.3e-94 349.4 262 69.8
Hund27024 Selenicereus undatus HOM05D005614 ORTHO05D006759 2.3e-94 349.4 246 73.2
EL10Ac1g01047 Beta vulgaris HOM05D005614 ORTHO05D006759 3.9e-94 348.6 252 70.6
Medtr3g072430 Medicago truncatula HOM05D005614 ORTHO05D006759 5.1e-94 348.2 240 70.4
Aqoxy7G02121 Aquilegia oxysepala HOM05D005614 ORTHO05D006759 6.6e-94 347.8 249 73.5
CSS0036035 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 5.6e-93 344.7 244 72.5
C08p18540 Brassica napus HOM05D005614 ORTHO05D006759 9.6e-93 344.0 235 74.0
RhsimUnG0093400 Rhododendron simsii HOM05D005614 ORTHO05D006759 9.6e-93 344.0 247 72.5
Ah.05g170870 Amaranthus hybridus HOM05D005614 ORTHO05D006759 2.1e-92 342.8 247 70.9
Rhsim11G0047100 Rhododendron simsii HOM05D005614 ORTHO05D006759 2.8e-92 342.4 247 72.1
arahy.Tifrunner.gnm1.ann1.2VS3GS Arachis hypogaea HOM05D005614 ORTHO05D006759 4.7e-92 341.7 272 65.8
arahy.Tifrunner.gnm1.ann1.MKV7IN Arachis hypogaea HOM05D005614 ORTHO05D006759 1.4e-91 340.1 270 65.6
Migut.D01926 Erythranthe guttata HOM05D005614 ORTHO05D006759 1.8e-91 339.7 243 71.6
Lsat_1_v5_gn_3_69700 Lactuca sativa HOM05D005614 ORTHO05D006759 1.8e-91 339.7 241 72.6
vmacro14329 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 1.8e-91 339.7 251 71.3
ECA246G0276 Erigeron canadensis HOM05D005614 ORTHO05D006759 2.4e-91 339.3 243 71.6
CAN.G628.77 Capsicum annuum HOM05D005614 ORTHO05D006759 3.1e-91 339.0 245 71.4
BraA08t34975Z Brassica rapa HOM05D005614 ORTHO05D006759 5.2e-91 338.2 238 71.4
HanXRQChr16g0532671 Helianthus annuus HOM05D005614 ORTHO05D006759 5.2e-91 338.2 243 70.4
A08p30430 Brassica napus HOM05D005614 ORTHO05D006759 6.8e-91 337.8 235 72.3
PGSC0003DMG400026996 Solanum tuberosum HOM05D005614 ORTHO05D006759 1.2e-90 337.0 244 70.9
Solyc06g071450.4 Solanum lycopersicum HOM05D005614 ORTHO05D006759 2.6e-90 335.9 244 70.5
CSS0020697 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 7.6e-90 334.3 245 71.4
HanXRQChr02g0053121 Helianthus annuus HOM05D005614 ORTHO05D006759 7.6e-90 334.3 243 69.5
SalBow7G1071 Salvia bowleyana HOM05D005614 ORTHO05D006759 7.6e-90 334.3 245 71.8
Sopen06g027730 Solanum pennellii HOM05D005614 ORTHO05D006759 7.6e-90 334.3 244 70.1
Nn8g39974 Nelumbo nucifera HOM05D005614 ORTHO05D006759 8.4e-89 330.9 238 72.3
COL.COLO4_35944 Corchorus olitorius HOM05D005614 ORTHO05D006759 1.4e-88 330.1 202 79.7
Eucgr.G01112 Eucalyptus grandis HOM05D005614 ORTHO05D006759 1.4e-88 330.1 214 76.2
DCAR_017415 Daucus carota HOM05D005614 ORTHO05D006759 1.9e-88 329.7 243 70.4
SalBow3G0912 Salvia bowleyana HOM05D005614 ORTHO05D006759 5.4e-88 328.2 245 71.4
Oeu024691.1 Olea europaea HOM05D005614 ORTHO05D006759 1.6e-87 326.6 227 73.1
Cc04_g13870 Coffea canephora HOM05D005614 ORTHO05D006759 4.6e-87 325.1 242 70.2
Sabra05G0133300 Salix brachista HOM05D005614 ORTHO05D006759 1.0e-86 323.9 288 63.2
Nitab4.5_0001017g0060 Nicotiana tabacum HOM05D005614 ORTHO05D006759 1.7e-86 323.2 264 65.9
HPP92_013333 Vanilla planifolia HOM05D005614 ORTHO05D006759 1.7e-86 323.2 256 65.6
Nitab4.5_0000866g0090 Nicotiana tabacum HOM05D005614 ORTHO05D006759 3.0e-86 322.4 264 65.5
ATR0684G165 Amborella trichopoda HOM05D005614 ORTHO05D006759 3.9e-86 322.0 246 68.7
Duzib041G0760 Durio zibethinus HOM05D005614 ORTHO05D006759 4.8e-84 315.1 241 68.0
Os02g0125800 Oryza sativa ssp. japonica HOM05D005614 ORTHO05D006759 1.3e-81 307.0 240 65.8
Zm00001eb208710 Zea mays HOM05D005614 ORTHO05D006759 3.5e-79 298.9 246 64.2
FAN24G3468 Fragaria x ananassa HOM05D005614 ORTHO05D006759 6.0e-79 298.1 381 48.6
AUR62019050 Chenopodium quinoa HOM05D005614 ORTHO05D006759 1.3e-76 290.4 248 60.9
SGA_v2.0_scaffold31G12915 Striga asiatica HOM05D005614 ORTHO05D006759 3.1e-75 285.8 235 66.0
BcaNung05442 Brassica carinata HOM05D005614 ORTHO05D006759 3.4e-74 282.3 208 70.2
Nitab4.5_0000003g0570 Nicotiana tabacum HOM05D005614 ORTHO05D006759 4.2e-72 275.4 237 63.3
MBI03_g33030_MAGBIO Magnolia biondii HOM05D005614 ORTHO05D006759 2.1e-71 273.1 252 60.7
Haze_00457 Corylus avellana HOM05D005614 ORTHO05D006759 5.6e-69 265.0 178 75.3
Gohir.D05G236900 Gossypium hirsutum HOM05D005614 ORTHO05D006759 3.7e-68 262.3 156 80.1
MELO3C008774.2 Cucumis melo HOM05D005614 ORTHO05D006759 1.8e-67 260.0 156 80.1
Mapoly0044s0012 Marchantia polymorpha HOM05D005614 ORTHO05D006759 2.4e-67 259.6 248 55.6
Peaxi162Scf00689g00225 Petunia axillaris HOM05D005614 ORTHO05D006759 5.5e-64 248.4 217 61.8
CDE06G0499 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 9.3e-64 247.7 181 68.0
vmacro00825 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 2.1e-63 246.5 234 61.1
TWI75G0111 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 6.0e-63 245.0 200 67.0
TPR.G24041 Trifolium pratense HOM05D005614 ORTHO05D006759 1.0e-62 244.2 175 70.3
Pp3c2_3680 Physcomitrium patens HOM05D005614 ORTHO05D006759 6.7e-62 241.5 251 52.6
Psat5g132360 Pisum sativum HOM05D005614 ORTHO05D006759 1.9e-56 223.4 161 69.6
CBR_g36358 Chara braunii HOM05D005614 ORTHO05D006759 5.0e-49 198.7 260 45.4
Oeu022164.1 Olea europaea HOM05D005614 ORTHO05D006759 1.4e-46 190.7 117 78.6
Lj4A622G15 Lonicera japonica HOM05D005614 ORTHO05D006759 2.2e-41 173.3 95 86.3
SEGI_11087 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 7.9e-39 164.9 96 81.2
TPR.G40310 Trifolium pratense HOM05D001808 ORTHO05D001747 2.0e-37 160.2 96 76.0
SEGI_10746 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 1.0e-33 147.9 152 56.6
Lj4A622G16 Lonicera japonica HOM05D005614 ORTHO05D006759 1.7e-33 147.1 123 65.9
SMO358G0086 Selaginella moellendorffii HOM05D005614 ORTHO05D006759 2.8e-28 129.8 157 47.8
CDE12G0551 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 6.3e-28 128.6 78 82.1
QL09p036498 Quercus lobata HOM05D005614 ORTHO05D006759 1.1e-27 127.9 69 85.5
Ca_31116_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 2.7e-23 113.2 92 67.4
Psat5g132400 Pisum sativum HOM05D005614 ORTHO05D006759 1.2e-21 107.8 70 72.9
Cre03.g172050 Chlamydomonas reinhardtii HOM05D005614 ORTHO05D006759 3.7e-20 102.8 249 30.9
CAN.G964.16 Capsicum annuum HOM05D005614 ORTHO05D006759 5.0e-17 92.4 103 52.4
MCO01G384 Micromonas commoda HOM05D005614 ORTHO05D006759 6.5e-17 92.0 206 32.5
Cfa025530 Carpinus fangiana HOM05D005614 ORTHO05D006759 5.5e-16 89.0 295 28.1
RhsimUnG0102200 Rhododendron simsii HOM05D005614 ORTHO05D006759 1.2e-15 87.8 92 55.4
PRCOL_00005856 Prasinoderma coloniale HOM05D005614 ORTHO05D006759 5.2e-14 82.4 96 44.8
Rhsim02G0185400 Rhododendron simsii HOM05D005614 ORTHO05D006759 2.0e-13 80.5 86 54.7
Cfa016005 Carpinus fangiana HOM05D005614 ORTHO05D006759 1.7e-09 67.4 57 63.2
Rhsim03G0117800 Rhododendron simsii HOM05D005614 ORTHO05D006759 7.3e-08 62.0 54 57.4


User provided reference genes

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