Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G243500 Manihot esculenta HOM05D006029 ORTHO05D007439 1.1e-64 249.6 113 100.0
Potri.012G015900 Populus trichocarpa HOM05D006029 ORTHO05D007439 1.6e-53 212.6 113 81.4
Sabra12G0016400 Salix brachista HOM05D006029 ORTHO05D007439 7.7e-53 210.3 113 79.6
GSVIVG01027190001 Vitis vinifera HOM05D006029 ORTHO05D007439 5.7e-48 194.1 113 73.5
Duzib138G0795 Durio zibethinus HOM05D006029 ORTHO05D007439 1.3e-47 193.0 113 76.1
TWI36G0126 Tripterygium wilfordii HOM05D006029 ORTHO05D007439 2.8e-47 191.8 113 72.6
COL.COLO4_06245 Corchorus olitorius HOM05D006029 ORTHO05D007439 3.7e-47 191.4 113 75.2
Gorai.004G150300 Gossypium raimondii HOM05D006029 ORTHO05D007439 1.8e-46 189.1 113 73.5
Gohir.D08G145300 Gossypium hirsutum HOM05D006029 ORTHO05D007439 4.1e-46 188.0 113 72.6
Gohir.D12G270400 Gossypium hirsutum HOM05D006029 ORTHO05D007439 5.3e-46 187.6 113 72.6
Gorai.008G290700 Gossypium raimondii HOM05D006029 ORTHO05D007439 5.3e-46 187.6 113 72.6
Gohir.A08G124200 Gossypium hirsutum HOM05D006029 ORTHO05D007439 9.1e-46 186.8 113 72.6
vmacro12594 Vaccinium macrocarpon HOM05D006029 ORTHO05D007439 1.0e-44 183.3 113 69.9
CiPaw.02G042300 Carya illinoinensis HOM05D006029 ORTHO05D007439 2.2e-44 182.2 113 70.8
Gohir.A12G269900 Gossypium hirsutum HOM05D006029 ORTHO05D007439 2.2e-44 182.2 113 70.8
Thecc.01G338500 Theobroma cacao HOM05D006029 ORTHO05D007439 5.0e-44 181.0 115 70.4
Cfa010653 Carpinus fangiana HOM05D006029 ORTHO05D007439 2.5e-43 178.7 113 69.0
Rhsim01G0175700 Rhododendron simsii HOM05D006029 ORTHO05D007439 3.2e-43 178.3 113 67.3
Sed0019070 Sechium edule HOM05D006029 ORTHO05D007439 3.2e-43 178.3 113 67.3
PGR102G2016 Punica granatum HOM05D006029 ORTHO05D007439 5.5e-43 177.6 113 68.1
Eucgr.E03439 Eucalyptus grandis HOM05D006029 ORTHO05D007439 6.1e-42 174.1 113 64.6
Eucgr.E03441 Eucalyptus grandis HOM05D006029 ORTHO05D007439 6.1e-42 174.1 113 64.6
Eucgr.E03442 Eucalyptus grandis HOM05D006029 ORTHO05D007439 6.1e-42 174.1 113 64.6
Eucgr.L01751 Eucalyptus grandis HOM05D006029 ORTHO05D007439 6.1e-42 174.1 113 64.6
ClCG10G013250 Citrullus lanatus HOM05D006029 ORTHO05D007439 8.0e-42 173.7 113 66.4
MELO3C026899.2 Cucumis melo HOM05D006029 ORTHO05D007439 1.0e-41 173.3 113 66.4
CsaV3_3G043380 Cucumis sativus L. HOM05D006029 ORTHO05D007439 1.0e-41 173.3 113 66.4
Ciclev10022957m.g Citrus clementina HOM05D006029 ORTHO05D007439 3.0e-41 171.8 111 67.6
Hma1.2p1_1482F.1_g286210 Hydrangea macrophylla HOM05D006029 ORTHO05D007439 6.8e-41 170.6 113 66.4
Phvul.008G101000 Phaseolus vulgaris HOM05D006029 ORTHO05D007439 8.8e-41 170.2 113 65.5
Glyma.07G131200 Glycine max HOM05D006029 ORTHO05D007439 1.2e-40 169.9 111 65.8
Glyma.18G179600 Glycine max HOM05D006029 ORTHO05D007439 4.4e-40 167.9 111 64.9
TAR374G1259 Trochodendron aralioides HOM05D006029 ORTHO05D007439 7.5e-40 167.2 113 62.8
arahy.Tifrunner.gnm1.ann1.A8XVJK Arachis hypogaea HOM05D006029 ORTHO05D007439 1.3e-39 166.4 113 64.6
arahy.Tifrunner.gnm1.ann1.ZU3BRN Arachis hypogaea HOM05D006029 ORTHO05D007439 1.3e-39 166.4 113 64.6
Sed0007850 Sechium edule HOM05D006029 ORTHO05D007439 1.3e-39 166.4 113 63.7
DCAR_006981 Daucus carota HOM05D006425 ORTHO05D007312 2.8e-39 165.2 113 61.9
Peaxi162Scf00156g00617 Petunia axillaris HOM05D006029 ORTHO05D007439 3.1e-38 161.8 113 60.2
Lalb_Chr04g0261421 Lupinus albus HOM05D006029 ORTHO05D007439 7.0e-38 160.6 113 60.2
CANSAT56G3403 Cannabis sativa HOM05D006029 ORTHO05D007439 2.7e-37 158.7 111 60.4
Cc00_g02440 Coffea canephora HOM05D006029 ORTHO05D007439 3.5e-37 158.3 113 59.3
Lj1g0014790 Lotus japonicus HOM05D006029 ORTHO05D007439 3.5e-37 158.3 113 61.1
Lj1g0022243 Lotus japonicus HOM05D006029 ORTHO05D007439 3.5e-37 158.3 113 61.1
Solyc05g055890.3 Solanum lycopersicum HOM05D006029 ORTHO05D007439 3.5e-37 158.3 113 59.3
Sopen05g034290 Solanum pennellii HOM05D006029 ORTHO05D007439 3.5e-37 158.3 113 59.3
Haze_03591 Corylus avellana HOM05D004263 ORTHO05D004931 7.7e-37 157.1 98 70.4
Cc06_g21100 Coffea canephora HOM05D006029 ORTHO05D007439 1.0e-36 156.8 113 59.3
Nn1g00349 Nelumbo nucifera HOM05D006029 ORTHO05D007439 1.0e-36 156.8 113 57.5
PGSC0003DMG402023468 Solanum tuberosum HOM05D006029 ORTHO05D007439 2.9e-36 155.2 113 57.5
CSS0011460 Camellia sinensis var. sinensis HOM05D006029 ORTHO05D007439 5.0e-36 154.5 96 68.8
HanXRQChr05g0130881 Helianthus annuus HOM05D006029 ORTHO05D007439 6.5e-36 154.1 113 59.3
Oeu043218.1 Olea europaea HOM05D006029 ORTHO05D007439 1.5e-35 152.9 113 58.4
Lsat_1_v5_gn_4_30800 Lactuca sativa HOM05D006029 ORTHO05D007439 2.5e-35 152.1 113 59.3
CAN.G694.9 Capsicum annuum HOM05D006029 ORTHO05D007439 2.8e-34 148.7 113 56.6
MSTRG.17362 Avicennia marina HOM05D006029 ORTHO05D007439 3.6e-34 148.3 113 57.5
Peaxi162Scf00740g00556 Petunia axillaris HOM05D006029 ORTHO05D007439 3.6e-34 148.3 103 60.2
unitig_60.g25801 Utricularia gibba HOM05D006029 ORTHO05D007439 3.6e-34 148.3 113 58.4
Psat3g005240 Pisum sativum HOM05D006029 ORTHO05D007439 2.3e-33 145.6 111 58.6
Lj3g0023283 Lotus japonicus HOM05D006029 ORTHO05D007439 1.5e-32 142.9 111 55.9
Migut.B01899 Erythranthe guttata HOM05D006029 ORTHO05D007439 9.8e-32 140.2 114 55.3
MD01G1085300 Malus domestica HOM05D006029 ORTHO05D007439 1.3e-31 139.8 109 56.9
Os02g0672700 Oryza sativa ssp. japonica HOM05D006029 ORTHO05D007439 4.9e-31 137.9 113 54.9
HPP92_017871 Vanilla planifolia HOM05D006029 ORTHO05D007439 8.3e-31 137.1 113 54.0
Sc02g0002910 Simmondsia chinensis HOM05D006029 ORTHO05D007439 4.1e-30 134.8 113 52.2
TPR.G4810 Trifolium pratense HOM05D006029 ORTHO05D007439 5.4e-30 134.4 111 54.1
Cpa.g.sc96.66 Carica papaya HOM05D006029 ORTHO05D007439 7.0e-30 134.0 113 54.0
HanXRQChr17g0563271 Helianthus annuus HOM05D006029 ORTHO05D007439 1.2e-29 133.3 105 56.2
AT4G07950 Arabidopsis thaliana HOM05D006029 ORTHO05D007439 2.7e-29 132.1 113 58.4
Haze_15690 Corylus avellana HOM05D006029 ORTHO05D007439 2.7e-29 132.1 85 67.1
Medtr5g030180 Medicago truncatula HOM05D006029 ORTHO05D007439 2.7e-29 132.1 115 49.6
EL10Ac5g10924 Beta vulgaris HOM05D006029 ORTHO05D007439 3.5e-29 131.7 113 54.0
Prupe.2G192900 Prunus persica HOM05D006029 ORTHO05D007439 3.5e-29 131.7 109 53.2
Medtr7g116750 Medicago truncatula HOM05D006029 ORTHO05D007439 5.9e-29 131.0 116 47.4
ATR0751G147 Amborella trichopoda HOM05D006029 ORTHO05D007439 2.9e-28 128.6 113 52.2
RcHm_v2.0_Chr1g0360471 Rosa chinensis HOM05D006029 ORTHO05D007439 3.8e-28 128.3 109 53.2
Hund17067 Selenicereus undatus HOM05D006029 ORTHO05D007439 3.8e-28 128.3 113 54.0
PSO170G0977 Papaver somniferum HOM05D006029 ORTHO05D007439 8.6e-28 127.1 113 51.3
THA.LOC104815886 Tarenaya hassleriana HOM05D006029 ORTHO05D007439 8.6e-28 127.1 113 54.0
AL1G11270 Arabidopsis lyrata HOM05D006029 ORTHO05D007439 1.1e-27 126.7 113 56.6
PSO782G1905 Papaver somniferum HOM05D006029 ORTHO05D007439 1.1e-27 126.7 113 50.4
PSO782G2649 Papaver somniferum HOM05D006029 ORTHO05D007439 1.1e-27 126.7 113 50.4
PSO782G4464 Papaver somniferum HOM05D006029 ORTHO05D007439 1.1e-27 126.7 113 50.4
Pp3c15_5550 Physcomitrium patens HOM05D006029 ORTHO05D007439 1.1e-27 126.7 113 49.6
Zm00001eb187060 Zea mays HOM05D006029 ORTHO05D007439 1.1e-27 126.7 113 50.4
Thhalv10009170m.g Eutrema salsugineum HOM05D006029 ORTHO05D007439 1.5e-27 126.3 113 54.9
Carub.0003s3000 Capsella rubella HOM05D006029 ORTHO05D007439 1.9e-27 125.9 113 56.6
FvH4_7g17060 Fragaria vesca HOM05D006029 ORTHO05D007439 3.3e-27 125.2 109 50.5
FAN01G1288 Fragaria x ananassa HOM05D006029 ORTHO05D007439 3.3e-27 125.2 109 50.5
FAN03G2913 Fragaria x ananassa HOM05D006029 ORTHO05D007439 3.3e-27 125.2 109 50.5
FAN06G2526 Fragaria x ananassa HOM05D006029 ORTHO05D007439 3.3e-27 125.2 109 50.5
FAN06G3186 Fragaria x ananassa HOM05D006029 ORTHO05D007439 3.3e-27 125.2 109 50.5
FAN10G2808 Fragaria x ananassa HOM05D006029 ORTHO05D007439 3.3e-27 125.2 109 50.5
FAN10G3748 Fragaria x ananassa HOM05D006029 ORTHO05D007439 3.3e-27 125.2 109 50.5
SGA_v2.0_scaffold22G09953 Striga asiatica HOM05D006029 ORTHO05D007439 3.3e-27 125.2 113 48.7
AT1G01210 Arabidopsis thaliana HOM05D006029 ORTHO05D007439 4.3e-27 124.8 113 55.8
BcaC07g42429 Brassica carinata HOM05D006029 ORTHO05D007439 4.3e-27 124.8 113 54.9
A03p11160 Brassica napus HOM05D000069 ORTHO05D021930 4.3e-27 124.8 113 54.9
A09p39050 Brassica napus HOM05D006029 ORTHO05D007439 4.3e-27 124.8 113 54.9
A09p68990 Brassica napus HOM05D006029 ORTHO05D007439 4.3e-27 124.8 113 54.9
BolC3t13750H Brassica oleracea HOM05D006029 ORTHO05D007439 4.3e-27 124.8 113 54.9
BolC8t52870H Brassica oleracea HOM05D006029 ORTHO05D007439 4.3e-27 124.8 113 54.9
BraA03t10431Z Brassica rapa HOM05D006029 ORTHO05D007439 4.3e-27 124.8 113 54.9
BraA09t42236Z Brassica rapa HOM05D006029 ORTHO05D007439 4.3e-27 124.8 113 54.9
BraA09t39405Z Brassica rapa HOM05D006029 ORTHO05D007439 5.6e-27 124.4 113 54.9
Sp1g01080 Schrenkiella parvula HOM05D006029 ORTHO05D007439 9.5e-27 123.6 113 54.9
Lsat_1_v5_gn_7_7741 Lactuca sativa HOM05D006029 ORTHO05D007439 2.8e-26 122.1 113 53.1
C03p12870 Brassica napus HOM05D006029 ORTHO05D007439 3.6e-26 121.7 113 54.0
CARHR001260 Cardamine hirsuta HOM05D006029 ORTHO05D007439 4.7e-26 121.3 113 54.0
Rhsim07G0002100 Rhododendron simsii HOM05D006029 ORTHO05D007439 1.4e-25 119.8 76 69.7
Nitab4.5_0000476g0280 Nicotiana tabacum HOM05D006029 ORTHO05D007439 2.3e-25 119.0 87 56.3
Aqoxy4G03109 Aquilegia oxysepala HOM05D006029 ORTHO05D007439 5.2e-25 117.9 113 47.8
AagrBONN_evm.TU.Sc2ySwM_117.3630 Anthoceros agrestis HOM05D006029 ORTHO05D007439 4.4e-24 114.8 111 48.6
Aa31LG1G10580 Aethionema arabicum HOM05D006029 ORTHO05D007439 7.5e-24 114.0 113 48.7
Lsat_1_v5_gn_6_63820 Lactuca sativa HOM05D006029 ORTHO05D007439 2.4e-22 109.0 140 42.9
QL08p046069 Quercus lobata HOM05D006029 ORTHO05D007439 4.1e-22 108.2 69 66.7
Mapoly0101s0063 Marchantia polymorpha HOM05D006029 ORTHO05D007439 5.4e-22 107.8 111 45.9
SMO159G0009 Selaginella moellendorffii HOM05D006029 ORTHO05D007439 3.5e-21 105.1 113 46.0
Nitab4.5_0009816g0020 Nicotiana tabacum HOM05D006029 ORTHO05D007439 1.7e-20 102.8 77 53.2
vmacro23448 Vaccinium macrocarpon HOM05D006029 ORTHO05D007439 5.0e-20 101.3 66 71.2
Dinv34229 Davidia involucrata HOM05D006425 ORTHO05D007312 1.1e-19 100.1 71 62.0
Atru.chr5.715 Acer truncatum HOM05D006029 ORTHO05D007439 2.5e-19 99.0 80 56.2
Cre02.g102400 Chlamydomonas reinhardtii HOM05D006029 ORTHO05D007439 3.3e-19 98.6 109 38.5
CBR_g49523 Chara braunii HOM05D006029 ORTHO05D007439 2.8e-18 95.5 98 42.9
MCO11G240 Micromonas commoda HOM05D006029 ORTHO05D007439 3.1e-17 92.0 111 38.7
Cc08_g08090 Coffea canephora HOM05D006029 ORTHO05D007439 4.0e-17 91.7 55 65.5
Lsat_1_v5_gn_6_81300 Lactuca sativa HOM05D006029 ORTHO05D007439 6.4e-15 84.3 61 60.7
SMO347G0197 Selaginella moellendorffii HOM05D006029 ORTHO05D007439 1.2e-13 80.1 113 38.1
CBR_g31408 Chara braunii HOM05D006029 ORTHO05D007439 6.0e-13 77.8 71 45.1
Ca_09543_v3 Cicer arietinum L. HOM05D006029 ORTHO05D007439 6.6e-12 74.3 83 43.4
Carub.0003s3001 Capsella rubella HOM05D003869 ORTHO05D004718 2.1e-10 69.3 72 48.6
PRCOL_00000799 Prasinoderma coloniale HOM05D006029 ORTHO05D007439 1.1e-09 67.0 95 38.9
RcHm_v2.0_Chr2g0124111 Rosa chinensis HOM05D005168 ORTHO05D006358 8.3e-07 57.4 115 31.3
FvH4_1g24780 Fragaria vesca HOM05D005168 ORTHO05D006358 1.4e-06 56.6 115 29.6
Zm00001eb054840 Zea mays HOM05D005168 ORTHO05D006358 4.1e-06 55.1 115 27.8


User provided reference genes

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